Gcaud1915.t1 (polypeptide) Gracilaria caudata M_176_S67 male
|
Overview
Homology
BLAST of Gcaud1915.t1 vs. uniprot
Match: A0A2V3J0S5_9FLOR (60S ribosomal protein L4-A n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0S5_9FLOR) HSP 1 Score: 419 bits (1077), Expect = 2.510e-145 Identity = 211/239 (88.28%), Postives = 225/239 (94.14%), Query Frame = 0
Query: 2 ATAAAVRPVVTVLSADSAQPSGTVPMPAVFSAPIRNDIVQFVHTNMRKNRRQPYAVNNMSGMQSSAASWGTGRAVSRIPRVPGGGTHRSGQGAFGNMCRGGRMFAPTKIWRKWHRKVPLNQKRYATVSALAASALPALVMARGHEIDDVPEVPLVIDDSVQAFNKTAKAVTLLKSLGAYDDVERVMETKNLRAGKGKMRNRRYKQRRGPLVVYHNDDGIVRAFRNLPGVDLCCVTRLNL 240
AT AA RPVV++LSA++AQPS + PMPAVFSAPIRNDIVQFVHTNMRKN RQPYAV+ M+G Q+SAASWGTGRAVSRIPRVPGGGTHRSGQGA+GNMCRGGRMFAPTKIWRKWHRKVP+NQKRYATVSALAASALPALVMARGHEIDDVPEVPLVID+SV+AF KTAKAVTLLKSLGAYDDVERVMETK RAGKGKMRNRRYKQRRGPLVVY DDGIV+AFRNLPG+DLC V RLNL
Sbjct: 3 ATTAAARPVVSILSAETAQPSSSTPMPAVFSAPIRNDIVQFVHTNMRKNSRQPYAVSKMAGTQTSAASWGTGRAVSRIPRVPGGGTHRSGQGAYGNMCRGGRMFAPTKIWRKWHRKVPVNQKRYATVSALAASALPALVMARGHEIDDVPEVPLVIDNSVEAFKKTAKAVTLLKSLGAYDDVERVMETKKQRAGKGKMRNRRYKQRRGPLVVYDKDDGIVKAFRNLPGLDLCSVHRLNL 241
BLAST of Gcaud1915.t1 vs. uniprot
Match: R7QMW1_CHOCR (Component of cytosolic 80S ribosome and 60S large subunit n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QMW1_CHOCR) HSP 1 Score: 397 bits (1020), Expect = 1.200e-136 Identity = 199/240 (82.92%), Postives = 217/240 (90.42%), Query Frame = 0
Query: 1 MATAAAVRPVVTVLSADSAQPSGTVPMPAVFSAPIRNDIVQFVHTNMRKNRRQPYAVNNMSGMQSSAASWGTGRAVSRIPRVPGGGTHRSGQGAFGNMCRGGRMFAPTKIWRKWHRKVPLNQKRYATVSALAASALPALVMARGHEIDDVPEVPLVIDDSVQAFNKTAKAVTLLKSLGAYDDVERVMETKNLRAGKGKMRNRRYKQRRGPLVVYHNDDGIVRAFRNLPGVDLCCVTRLNL 240
M++ AA RPVVTVLSA++ QPSG+ MPAVF+APIRND+VQ VHT+MRKN RQPYAV+ M+GMQSSA SWGTGRAVSRIPRVPGGGTHRSGQGAFGNMCRGGRMFAPT+IWRKWHRKVP QKRYA VSALAASALPALVMARGHEIDDVPEVPLVID + + KTAKAVTLLKSLGAYDDVERVMET+ +RAGKGK+RNRR+KQRRGPLVVY DDGIV+AFRNLPGVDLC V LNL
Sbjct: 1 MSSPAAARPVVTVLSAETGQPSGSTSMPAVFTAPIRNDLVQIVHTSMRKNHRQPYAVSRMAGMQSSAESWGTGRAVSRIPRVPGGGTHRSGQGAFGNMCRGGRMFAPTRIWRKWHRKVPRKQKRYAVVSALAASALPALVMARGHEIDDVPEVPLVIDGTAEGMKKTAKAVTLLKSLGAYDDVERVMETRKMRAGKGKLRNRRFKQRRGPLVVYEKDDGIVKAFRNLPGVDLCSVDCLNL 240
BLAST of Gcaud1915.t1 vs. uniprot
Match: A0A1X6NKA5_PORUM (Ribos_L4_asso_C domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NKA5_PORUM) HSP 1 Score: 341 bits (874), Expect = 1.690e-114 Identity = 169/233 (72.53%), Postives = 197/233 (84.55%), Query Frame = 0
Query: 8 RPVVTVLSADSAQPSGTVPMPAVFSAPIRNDIVQFVHTNMRKNRRQPYAVNNMSGMQSSAASWGTGRAVSRIPRVPGGGTHRSGQGAFGNMCRGGRMFAPTKIWRKWHRKVPLNQKRYATVSALAASALPALVMARGHEIDDVPEVPLVIDDSVQAFNKTAKAVTLLKSLGAYDDVERVMETKNLRAGKGKMRNRRYKQRRGPLVVYHNDDGIVRAFRNLPGVDLCCVTRLNL 240
RP V+V S + + SG++PMPAVF+APIR D+V+ VHT+M KN+RQPYAV+ M+GMQ+SA SWGTGRAVSRIPRVPGGGTHRSGQGAFGNMCRGGRMF+PTKIWRKWHRK+ +NQ+RYA VSALAASALPALVMARGH+ID VPEVPLV+ + KTA AV LLK+LGA D+ +V +K +R GKGKMRNRRY QRRGPL++Y D GIV+AFRNLPGVD CCV RLNL
Sbjct: 5 RPTVSVHS-TAGEASGSLPMPAVFTAPIRPDVVRSVHTSMAKNKRQPYAVSKMAGMQTSAESWGTGRAVSRIPRVPGGGTHRSGQGAFGNMCRGGRMFSPTKIWRKWHRKIAVNQRRYAVVSALAASALPALVMARGHKIDHVPEVPLVVSAEAEDVAKTAAAVALLKTLGANSDLNKVKASKKIRPGKGKMRNRRYVQRRGPLIIYEKDGGIVKAFRNLPGVDTCCVDRLNL 236
BLAST of Gcaud1915.t1 vs. uniprot
Match: A0A7S1ETT1_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ETT1_9RHOD) HSP 1 Score: 336 bits (862), Expect = 1.080e-112 Identity = 167/233 (71.67%), Postives = 195/233 (83.69%), Query Frame = 0
Query: 8 RPVVTVLSADSAQPSGTVPMPAVFSAPIRNDIVQFVHTNMRKNRRQPYAVNNMSGMQSSAASWGTGRAVSRIPRVPGGGTHRSGQGAFGNMCRGGRMFAPTKIWRKWHRKVPLNQKRYATVSALAASALPALVMARGHEIDDVPEVPLVIDDSVQAFNKTAKAVTLLKSLGAYDDVERVMETKNLRAGKGKMRNRRYKQRRGPLVVYHNDDGIVRAFRNLPGVDLCCVTRLNL 240
RP VTV+S ++ + G+ +P VF APIR D+V VHT M KN+RQPYAV +SGMQSSA SWGTGRAVSRIPRVPG GTHRSGQGAFGNMCRGGRMFAPTKIWRKWH K+ +NQ+RYA VSALAASALPALVMARGH ID+V E+PLV+ +SV+ F KTAKA+ LL+ LGA DV+RV ++K LR+GKGK+R+RRY QRRGPLVVY D GIV+AFRN+PGV+LC V RLNL
Sbjct: 4 RPTVTVVSGENGEACGSCGLPEVFRAPIRPDVVNQVHTAMAKNKRQPYAVGRLSGMQSSAESWGTGRAVSRIPRVPGSGTHRSGQGAFGNMCRGGRMFAPTKIWRKWHVKIAVNQRRYALVSALAASALPALVMARGHSIDEVAEIPLVVSNSVEEFKKTAKAMELLEKLGAAADVDRVKDSKKLRSGKGKLRDRRYTQRRGPLVVYAEDSGIVKAFRNIPGVELCSVERLNL 236
BLAST of Gcaud1915.t1 vs. uniprot
Match: A0A5J4Y2W8_9CHLO (60S ribosomal L4-like n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y2W8_9CHLO) HSP 1 Score: 331 bits (849), Expect = 3.580e-110 Identity = 164/236 (69.49%), Postives = 197/236 (83.47%), Query Frame = 0
Query: 5 AAVRPVVTVLSADSAQPSGTVPMPAVFSAPIRNDIVQFVHTNMRKNRRQPYAVNNMSGMQSSAASWGTGRAVSRIPRVPGGGTHRSGQGAFGNMCRGGRMFAPTKIWRKWHRKVPLNQKRYATVSALAASALPALVMARGHEIDDVPEVPLVIDDSVQAFNKTAKAVTLLKSLGAYDDVERVMETKNLRAGKGKMRNRRYKQRRGPLVVYHNDDGIVRAFRNLPGVDLCCVTRLNL 240
AA RP+V + S D S +PAVF+APIR DIV+ VHT + KN+RQPYAV +GMQSSA SWGTGRAVSRIPRVPGGGTHR+GQGAFGNMCRGGRMF+PTK+WR+WHRK+ +NQKRYA VSALAASALP+LVMARGH+I+ VPE+PLV+DDS ++ KT+KAV +LKS+GAY+D E+ ++KN+R GKGKMRNRRY R+GPLV+Y ND+GI +AFRNLPGVD VT LNL
Sbjct: 2 AASRPLVAIQSIDEGS-SEQANLPAVFTAPIRPDIVRQVHTGLAKNKRQPYAVKFEAGMQSSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFSPTKVWRRWHRKININQKRYAVVSALAASALPSLVMARGHKIEKVPEIPLVVDDSSESITKTSKAVQILKSVGAYEDAEKAKDSKNVRRGKGKMRNRRYVNRKGPLVIYGNDNGIAKAFRNLPGVDTAPVTALNL 236
BLAST of Gcaud1915.t1 vs. uniprot
Match: UPI001F040475 (60S ribosomal protein L4-B-like n=2 Tax=Alcyoniina TaxID=723662 RepID=UPI001F040475) HSP 1 Score: 330 bits (845), Expect = 4.230e-110 Identity = 161/235 (68.51%), Postives = 193/235 (82.13%), Query Frame = 0
Query: 6 AVRPVVTVLSADSAQPSGTVPMPAVFSAPIRNDIVQFVHTNMRKNRRQPYAVNNMSGMQSSAASWGTGRAVSRIPRVPGGGTHRSGQGAFGNMCRGGRMFAPTKIWRKWHRKVPLNQKRYATVSALAASALPALVMARGHEIDDVPEVPLVIDDSVQAFNKTAKAVTLLKSLGAYDDVERVMETKNLRAGKGKMRNRRYKQRRGPLVVYHNDDGIVRAFRNLPGVDLCCVTRLNL 240
A RP++TV + S TV +PAVF APIR D+V FVHTNM KN+RQPYAV++ +G Q+SA SWGTGRAV+RIPRV GGGTHRSGQGA+GNMCRGGRMFAPTKIWR+WHRK+ +NQKRYA SALA SALPALVMARGH+I+ +PEVPLV+ + +++ KT+ AV LLK L AYDDVER +K +RAGKGKMRNRRY QR+GPL++Y+ D GI +AFRNLPGVDL V R+NL
Sbjct: 2 AARPLITVYNEKGEATSNTVALPAVFKAPIRPDVVNFVHTNMAKNKRQPYAVSSKAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAYGNMCRGGRMFAPTKIWRRWHRKINVNQKRYAVCSALAGSALPALVMARGHKIEKIPEVPLVVANGIESVQKTSNAVKLLKDLNAYDDVERCKSSKKIRAGKGKMRNRRYVQRKGPLIIYNEDHGIRQAFRNLPGVDLLSVDRMNL 236
BLAST of Gcaud1915.t1 vs. uniprot
Match: A0A7S3UBQ8_9CHLO (Hypothetical protein n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A7S3UBQ8_9CHLO) HSP 1 Score: 328 bits (841), Expect = 3.850e-109 Identity = 158/236 (66.95%), Postives = 199/236 (84.32%), Query Frame = 0
Query: 5 AAVRPVVTVLSADSAQPSGTVPMPAVFSAPIRNDIVQFVHTNMRKNRRQPYAVNNMSGMQSSAASWGTGRAVSRIPRVPGGGTHRSGQGAFGNMCRGGRMFAPTKIWRKWHRKVPLNQKRYATVSALAASALPALVMARGHEIDDVPEVPLVIDDSVQAFNKTAKAVTLLKSLGAYDDVERVMETKNLRAGKGKMRNRRYKQRRGPLVVYHNDDGIVRAFRNLPGVDLCCVTRLNL 240
AA RP+VTVL+AD A+ +G+ +P+VFSAPIR D+V+FVHTNM KN RQPYAV+ ++G Q++A SWGTGRAVSRIPRVPGGGTHR+GQGAFGNMCRGGRMFAPTK WR+WHRK+ + QKR+A VSA+AASA+PALVMARGH I VPE+PLV+ D V++ +KT +A+ +LK +G YDDV + +++N+R GKGKMRNRRY R+GPLV+Y N++GI +AFRN+PGVDL V LNL
Sbjct: 2 AATRPLVTVLTADGAE-AGSTTLPSVFSAPIRPDLVRFVHTNMAKNARQPYAVSKVAGHQTAAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKTWRRWHRKINIRQKRHAVVSAMAASAVPALVMARGHRISQVPEIPLVLADDVESISKTKQALEILKKVGGYDDVSKADKSRNIRRGKGKMRNRRYVSRKGPLVIYENEEGIAKAFRNIPGVDLARVDSLNL 236
BLAST of Gcaud1915.t1 vs. uniprot
Match: A0A5J4YUI2_PORPP (60S ribosomal protein L4-A n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YUI2_PORPP) HSP 1 Score: 325 bits (833), Expect = 2.460e-108 Identity = 160/234 (68.38%), Postives = 194/234 (82.91%), Query Frame = 0
Query: 8 RPVVTVLSADSAQPSGTVPMPAVFSAPIRNDIVQFVHTNMRKNRRQPYAVNNMSGMQSSAASWGTGRAVSRIPRVPGGGTHRSGQGAFGNMCRGGRMFAPTKIWRKWHRKVPLNQKRYATVSALAASALPALVMARGHEIDDVPEVPLVIDDSVQAFNKTAKAVTLLKSLGAYDDVERVMET-KNLRAGKGKMRNRRYKQRRGPLVVYHNDDGIVRAFRNLPGVDLCCVTRLNL 240
RP V V+SA++ + SGT+ +P VF APIR D+V VHT + KNRRQPYAV ++GMQSSA SWGTGRAVSRIPRVPGGGTHRSGQGAFGNMCRGGRMFAPT++WRKWH KV +NQ+RYA VSA+AASALPALVMARGH +D+VPEVPLV+ + A KTAKA+ L+++GA DDVE+V ++ K +RAG+GK+R R+ RRGPLV+Y DDGIV+AFRN+PGV+LC V LNL
Sbjct: 4 RPAVNVVSAETGEASGTLSLPDVFLAPIRPDVVNKVHTAIAKNRRQPYAVARLAGMQSSAESWGTGRAVSRIPRVPGGGTHRSGQGAFGNMCRGGRMFAPTRVWRKWHVKVAVNQRRYALVSAIAASALPALVMARGHRVDNVPEVPLVVSTEINAIKKTAKALACLQTVGAGDDVEKVNKSRKQMRAGQGKLRRSRFTPRRGPLVIYEKDDGIVKAFRNIPGVELCSVNHLNL 237
BLAST of Gcaud1915.t1 vs. uniprot
Match: M2W717_GALSU (60S ribosomal protein L4 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W717_GALSU) HSP 1 Score: 325 bits (834), Expect = 3.110e-108 Identity = 161/240 (67.08%), Postives = 192/240 (80.00%), Query Frame = 0
Query: 1 MATAAAVRPVVTVLSADSAQPSGTVPMPAVFSAPIRNDIVQFVHTNMRKNRRQPYAVNNMSGMQSSAASWGTGRAVSRIPRVPGGGTHRSGQGAFGNMCRGGRMFAPTKIWRKWHRKVPLNQKRYATVSALAASALPALVMARGHEIDDVPEVPLVIDDSVQAFNKTAKAVTLLKSLGAYDDVERVMETKNLRAGKGKMRNRRYKQRRGPLVVYHNDDGIVRAFRNLPGVDLCCVTRLNL 240
M + A RP+V+V S + G V +PAVF+APIR+D+V+ VHT M N+RQPYAV+ +GMQSSA SWGTGRAV+RIPRVPGGGTHR+GQGAFGNMCRGGR FAPTKIWR+WHRK+ N+KRYA SALAASAL +LVMARGH I+ V EVPLVI D Q KT AV LL+ +GAY+DV +V E+K LRAGKGK+RNRRY QRRGPL++Y D+GIV+AFRNLPGV+LC + LNL
Sbjct: 1 MVSVAVARPLVSVFSVEGEGTEGEVALPAVFTAPIRSDVVRSVHTRMALNKRQPYAVSTKAGMQSSAESWGTGRAVARIPRVPGGGTHRAGQGAFGNMCRGGRRFAPTKIWRRWHRKITKNEKRYAVASALAASALTSLVMARGHRIERVSEVPLVIGDQAQTMKKTKAAVALLEKIGAYEDVIKVKESKKLRAGKGKLRNRRYTQRRGPLIIYEKDEGIVKAFRNLPGVELCRMDSLNL 240
BLAST of Gcaud1915.t1 vs. uniprot
Match: A0A7S0RBK1_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0RBK1_9CHLO) HSP 1 Score: 324 bits (830), Expect = 2.880e-107 Identity = 156/233 (66.95%), Postives = 196/233 (84.12%), Query Frame = 0
Query: 8 RPVVTVLSADSAQPSGTVPMPAVFSAPIRNDIVQFVHTNMRKNRRQPYAVNNMSGMQSSAASWGTGRAVSRIPRVPGGGTHRSGQGAFGNMCRGGRMFAPTKIWRKWHRKVPLNQKRYATVSALAASALPALVMARGHEIDDVPEVPLVIDDSVQAFNKTAKAVTLLKSLGAYDDVERVMETKNLRAGKGKMRNRRYKQRRGPLVVYHNDDGIVRAFRNLPGVDLCCVTRLNL 240
RP+V+V+S ++ + +G +PAVFSAPIR DIV+ +HT+M KN+RQ Y+V +G Q++A SWGTGRAVSRIPRVPGGGTHR+GQGAFGNMCRGGRMFAPTK+WR+WHRK+ +NQKRYA VSALAASALPALVMARGH ++ VPEVPLV+ D+ ++ KT+KAV +LK +GAY DVE+ ++K +RAGKGKMRNRRY R+GPLVVY N++GI +AFRNLPGV++ V LNL
Sbjct: 3 RPLVSVISVETGEAAGQTALPAVFSAPIRPDIVRTIHTHMAKNKRQAYSVFYKAGHQTAAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKVWRRWHRKININQKRYAVVSALAASALPALVMARGHRVEQVPEVPLVLSDAAESITKTSKAVEVLKKIGAYPDVEKSKDSKAIRAGKGKMRNRRYTLRKGPLVVYANNNGIAKAFRNLPGVEVASVDTLNL 235 The following BLAST results are available for this feature:
BLAST of Gcaud1915.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gcaud1915.t1 ID=Gcaud1915.t1|Name=Gcaud1915.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=240bpback to top |