Gcaud1728.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1728.t1
Unique NameGcaud1728.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length924
Homology
BLAST of Gcaud1728.t1 vs. uniprot
Match: A0A2V3ITY6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITY6_9FLOR)

HSP 1 Score: 665 bits (1716), Expect = 1.970e-223
Identity = 417/865 (48.21%), Postives = 536/865 (61.97%), Query Frame = 0
Query:    2 YHSAVDVFRARVDAALPSVLIFYRGERSFFCKQWLRRWLSIRGLAPRLRQLNAMLLLISSQSQGKAFSVADQLVGTRPDLHSHVLFFGDPHNTLVQYLRANAMPAPVVTNPQLHRAHGWLFEHGMVQPAVLAVFPHAVLYQWCSRPSFLNGAGKLDRPDPWHVWDSIESEMERVVNTQPSPLPLPMQSPSETSHRSAHVPVLSNSPT-ADAPQSPVLSE----LKSTSARPIH----VVESKLLPT-PSTVNTHSSEHSSEQSSSPEQLGATIRRLSSTLNALSSDTQKTPSHIHQNDLMCLPHILEHVFSAPAIATTLEPKHAQSPSS--SELRLQSSSWYDRRDTELNASQGKLHQFNAE------HTTTSESAAWDRLQLFGRIQGSQSSLQSSASSDHKSTEPILTSPERLEGKFS-TYVLNDEYTSSEIDAISVKDIRERLDS---DEQHHYSQLFARVSTLERQGTNRSFRSLLNTESQGP-SSSDVREPLEGSNTSLGSDVVDSLVRKVRSVRTSDSNLMSQFREGISFPSIRIDEEGENLEAGVFDILKELSDHLNIQEKRSSGSSKKSLKPSAVRAENFAANSRPDAGVLSLERKSSVDTAPITYTSFRNVLRVGIRDYSATASNEPLPVRRDRTTKGIIPELGDTQQGAKGSDSLVCDEVPTAFRMHHSQSDMARYAA-SLQSDASCDVGTSLLDVDSARERDERRS---ETHIHDEYEAYDEFLVAEYEVEERVEEQQSGNCKTGSQRDRPLSIGPQHVWVEEERELLRPIKSDTSPLDSALSKFNSSRRGEG-GVRGALGRLRRSVRYDEGERPRRLDSIKAMLLGRGRALGAADGDDVVRLASGPVGGVPED 838
            YH+A+D F AR+ A LP +L+FYRGERSFFC+QWL+RWLSIR L+PRL QLNA LL + SQSQGKAFS+ADQL          VLF+GDP N LV +L A+ +PAPV+TNP +HRAHGWLFEHGMVQPAV+AVF + VLY WCS PSFLNGAGKLDRPDPW VWD IE+ +E ++  +  P  +  +  S++S RS        +PT AD+PQSP+LS+    L ++S R       VV S    T P+ ++   + H +    +   L  TI     T N  S+ T   P            ++ E    +P+     E    QSPSS    L+LQ+  WYDR DT+LNAS  KLH F +       H +  +SA+ DRLQLF  IQ S SSL SSASSDH+S  P ++SP+  +   S T +LNDEY SSE+D +     RE   S   D+QHHYSQ  AR + +ER   NR+ R L + +SQGP SS D+REPLEGS  SLGSDVVDS++++V SVRTSDSN  S  R+G+SFPSIRIDEE E+ E+GVFD+L+ELSD + + E+RSS   +KS +  + RA  F+ ++R   GV SLER  S+++ P+  +S  N+   G              VR+DRTTK IIPEL    +   GS   + D+ P   R H  QS+     A SLQSD S DV  +++DV S  +R    +      + DEYEAYD+F+VAEY+VEE VEE+QS N      RD    IG   +    E+E LR IKS+TSP+D  LSKF+  R  +G G+RGA GR+RRS+RY++ ERPRR DS+KA +LGRG   G  DG   VR  S   GG  ED
Sbjct:    4 YHTALDTFSARIHAGLPCILVFYRGERSFFCRQWLKRWLSIRALSPRLTQLNAALLFVCSQSQGKAFSLADQLTNVTQHPSHQVLFYGDPDNALVNHLTASKLPAPVITNPTVHRAHGWLFEHGMVQPAVIAVFENVVLYHWCSNPSFLNGAGKLDRPDPWQVWDLIETNLESILKQRFPPQCIIPKLSSQSSTRSRLHSASGATPTSADSPQSPLLSDRNASLSASSYRSQRTEPSVVSSAFATTDPAVLHVRQNAHHTHSRQNHSSLVNTIN----TANLSSNSTVNRPG----------TNLFELTSFSPSHQPQPEQHATQSPSSPHESLKLQTPLWYDRPDTDLNASHHKLHNFTSSIPDSPPHPSDIQSAS-DRLQLFAAIQSSHSSLHSSASSDHRSPLPFVSSPDHPQRSSSATLLLNDEYASSELDVLCSPPSREDKLSRQLDDQHHYSQFLARATAMERNALNRAQRGLRSPDSQGPPSSGDLREPLEGSAASLGSDVVDSVLKRVGSVRTSDSNAGSHLRDGVSFPSIRIDEENEHRESGVFDVLRELSDQIYLYERRSS---RKSDRSGSGRALGFSTDARVPRGVRSLERNPSIESIPLKSSSGTNIGSAG--------------VRKDRTTKSIIPELDGVIKAKPGSS--LSDDSPLFVRNHSVQSETTGICAPSLQSDLSSDVDATVVDVASPNQRRTSHNPQMSARVRDEYEAYDDFVVAEYQVEESVEERQSDNAPNAHDRDLRAPIGSGDMIHGGEQEELRAIKSETSPMDETLSKFSRGRHIDGRGLRGAFGRVRRSIRYEDSERPRRFDSLKAKMLGRGEGRGG-DGRAGVRTRSR--GGNAED 831          
The following BLAST results are available for this feature:
BLAST of Gcaud1728.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3ITY6_9FLOR1.970e-22348.21Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 188..221
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 453..482
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 375..389
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 173..282
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 375..395
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 236..282

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1557_length_9764_cov_4.162618contigNODE_1557_length_9764_cov_4.162618:2692..7885 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1728.t1Gcaud1728.t1Gracilaria caudata M_176_S67 malemRNANODE_1557_length_9764_cov_4.162618 2692..7885 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1728.t1 ID=Gcaud1728.t1|Name=Gcaud1728.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=924bp
MYHSAVDVFRARVDAALPSVLIFYRGERSFFCKQWLRRWLSIRGLAPRLR
QLNAMLLLISSQSQGKAFSVADQLVGTRPDLHSHVLFFGDPHNTLVQYLR
ANAMPAPVVTNPQLHRAHGWLFEHGMVQPAVLAVFPHAVLYQWCSRPSFL
NGAGKLDRPDPWHVWDSIESEMERVVNTQPSPLPLPMQSPSETSHRSAHV
PVLSNSPTADAPQSPVLSELKSTSARPIHVVESKLLPTPSTVNTHSSEHS
SEQSSSPEQLGATIRRLSSTLNALSSDTQKTPSHIHQNDLMCLPHILEHV
FSAPAIATTLEPKHAQSPSSSELRLQSSSWYDRRDTELNASQGKLHQFNA
EHTTTSESAAWDRLQLFGRIQGSQSSLQSSASSDHKSTEPILTSPERLEG
KFSTYVLNDEYTSSEIDAISVKDIRERLDSDEQHHYSQLFARVSTLERQG
TNRSFRSLLNTESQGPSSSDVREPLEGSNTSLGSDVVDSLVRKVRSVRTS
DSNLMSQFREGISFPSIRIDEEGENLEAGVFDILKELSDHLNIQEKRSSG
SSKKSLKPSAVRAENFAANSRPDAGVLSLERKSSVDTAPITYTSFRNVLR
VGIRDYSATASNEPLPVRRDRTTKGIIPELGDTQQGAKGSDSLVCDEVPT
AFRMHHSQSDMARYAASLQSDASCDVGTSLLDVDSARERDERRSETHIHD
EYEAYDEFLVAEYEVEERVEEQQSGNCKTGSQRDRPLSIGPQHVWVEEER
ELLRPIKSDTSPLDSALSKFNSSRRGEGGVRGALGRLRRSVRYDEGERPR
RLDSIKAMLLGRGRALGAADGDDVVRLASGPVGGVPEDVWLTFISVMDER
AVFLLKLLHGFVGYFEICHLREEMVSRKLQVIEARFRVGFLPLYGTTCIK
DQKPERAHGGFLVFDFKCTLRRY*
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