Gcaud7351.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gcaud7351.t1
Unique Name	Gcaud7351.t1
Type	polypeptide
Organism	Gracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length	247

Homology

[Close]

BLAST of Gcaud7351.t1 vs. uniprot
Match: A0A2V3ICQ0_9FLOR (Uncharacterized protein n=3 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ICQ0_9FLOR)

HSP 1 Score: 379 bits (973), Expect = 3.170e-131
Identity = 181/245 (73.88%), Postives = 207/245 (84.49%), Query Frame = 0

Query:    1 MRFFSIVSSLLLVLLLGDTLAQKLTLKSCKQMCARQYMSALRRKSCPPTSRRSAVRTGRVPAGGVCSSDADCVEGYACAASKTCNKVVKDVSFYVFANDYCEVFINGQYQGYVPRGFDVVEFKYSGTCDDIIMKVTNTGEYISSGIVMNFGGWNHGSQGFHQPPNGIALPIYGRAKLSPEGNFTNNDPSYDYMGWHEAIYAADMDQTGNFPKAMKDAGADPVTSDDIPTPDDTVMGIRYEFPDCY 245
            MRF+SI+SS  LVLLL + LAQKLTLK+CK+MC R+ +S L  K+C   +  SA        GGVCSSDADC EGY CAASKTCNK+V++V +YV+ NDYCE+FIN QYQG+VP GFDVV+F YSGTCDDIIMKVTN  +YISSGIVM +GGWNH SQGFHQ PNGIA+PIYGRAKLSPEGNFTNN PSYDYM W+EA+YAADMDQTGNFP++MKDAGADPVTSDD+ TP DTVMGIRYEFP+CY
Sbjct:    1 MRFYSILSSARLVLLLSNGLAQKLTLKACKRMCGREQISRLSSKTCSAKATSSAAXXXXXXXGGVCSSDADCAEGYGCAASKTCNKIVENVDYYVWTNDYCEIFINRQYQGFVPSGFDVVKFTYSGTCDDIIMKVTNGYDYISSGIVMKYGGWNHASQGFHQAPNGIAIPIYGRAKLSPEGNFTNNYPSYDYMSWNEAVYAADMDQTGNFPQSMKDAGADPVTSDDVLTPLDTVMGIRYEFPECY 245

[Close]

BLAST of Gcaud7351.t1 vs. uniprot
Match: A0A2V3IDN0_9FLOR (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDN0_9FLOR)

HSP 1 Score: 346 bits (887), Expect = 4.060e-118
Identity = 170/237 (71.73%), Postives = 188/237 (79.32%), Query Frame = 0

Query:    9 SLLLVLLLGDTLAQKLTLKSCKQMCARQYMSALRRKSCPPTSRRSAVRTGRVPAGGVCSSDADCVEGYACAASKTCNKVVKDVSFYVFANDYCEVFINGQYQGYVPRGFDVVEFKYSGTCDDIIMKVTNTGEYISSGIVMNFGGWNHGSQGFHQPPNGIALPIYGRAKLSPEGNFTNNDPSYDYMGWHEAIYAADMDQTGNFPKAMKDAGADPVTSDDIPTPDDTVMGIRYEFPDCY 245
            +LL +LLL    A  LTLK CKQ+C+R+          P  + +S+VRTG+V AGG CSSD          ASKTCNKV+KDV +YVFANDYCEVFING+YQGYVP GF V +F YSG CDDIIMKVTNTG++ISSGIVM +GGW HGSQGFHQ PNGIALPIYGRAKLSPEGNFTNNDPSYDYM W EAIYA DMD TGNFP +MK+ GADPVTSDDI TPDDTVMGIRYEFPDCY
Sbjct:   10 ALLSLLLLRSAQAGGLTLKQCKQICSRRSACGAPTHRSPRRATKSSVRTGQVKAGGSCSSDXXXXXXXXXXASKTCNKVLKDVPYYVFANDYCEVFINGKYQGYVPTGFAVQKFTYSGVCDDIIMKVTNTGDFISSGIVMEYGGWKHGSQGFHQTPNGIALPIYGRAKLSPEGNFTNNDPSYDYMSWKEAIYAKDMDATGNFPSSMKENGADPVTSDDIYTPDDTVMGIRYEFPDCY 246

The following BLAST results are available for this feature:

BLAST of Gcaud7351.t1 vs. uniprot

BLAST of Gcaud7351.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A2V3ICQ0_9FLOR	3.170e-131	73.88	Uncharacterized protein n=3 Tax=Gracilariopsis cho...	[more]
A0A2V3IDN0_9FLOR	4.060e-118	71.73	Uncharacterized protein n=2 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 17..21
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..3
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 22..246
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..21
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 4..16

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
NODE_1542_length_9851_cov_4.655123	contig	NODE_1542_length_9851_cov_4.655123:1737..2477 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria caudata M_176_S67 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gcaud7351.t1	Gcaud7351.t1	Gracilaria caudata M_176_S67 male	mRNA	NODE_1542_length_9851_cov_4.655123 1737..2477 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gcaud7351.t1 ID=Gcaud7351.t1|Name=Gcaud7351.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=247bp
MRFFSIVSSLLLVLLLGDTLAQKLTLKSCKQMCARQYMSALRRKSCPPTS
RRSAVRTGRVPAGGVCSSDADCVEGYACAASKTCNKVVKDVSFYVFANDY
CEVFINGQYQGYVPRGFDVVEFKYSGTCDDIIMKVTNTGEYISSGIVMNF
GGWNHGSQGFHQPPNGIALPIYGRAKLSPEGNFTNNDPSYDYMGWHEAIY
AADMDQTGNFPKAMKDAGADPVTSDDIPTPDDTVMGIRYEFPDCYS*