Gcaud8539.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8539.t1
Unique NameGcaud8539.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length329
Homology
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BLAST of Gcaud8539.t1 vs. uniprot
Match: A0A2V3IZU1_9FLOR (2-methylene-furan-3-one reductase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZU1_9FLOR)

HSP 1 Score: 369 bits (948), Expect = 9.740e-125
Identity = 197/327 (60.24%), Postives = 241/327 (73.70%), Query Frame = 0 
Query:    8 PTAMDALFLTRDTK---RKRHFNLLAGSVPVPPAAPPHLLVEVKAAAVSARDIAICRSLRALP---GKRHPLRAPVPGCALAGVVVRAPPQSDFKSGETVAALTRFGGGFGPYAALKPSECWRTHLSFADAAATAGAASAAFQAVRAAGVAAGYTVAVAGVLTAPGALIAQTCRLVYGARVVAGVHGADQLSAAAKYADIVVDRKLEKVTSKIASVPIDVAFDVEGRLEQLCRIVKKGGVVIRVICSAERVCEKEAKRVRNLCRKKDITLRRIEGCIDSKAVESTKSLLHTLQLSAPSGPAFGVRQWGPALRTAEKGVDVGAVLLLH 328
            P+ M+ALFLT   K     R + LLAG VPVP A   HLL+ VKAAAV ARD+AICR+ R+LP    +  P   PVPGCAL+GVVV APP   F+ G+ VAALTRFGG F PYA +   ECW T L FADAA TAGAAS AFQAVR A +    TVA+AG LTA GALIA+TCRLVYG  V+AGVHG  Q + A  YA+ VVDR   KVT+++    +DVAFDVEGRLEQLC++VKKGG V+RVI + E + + +A+RVR +C  + + L R+EG +D++AV+STK+LL TLQ+ APSGPAFG++QWGPAL  AE+GVDVGAV+LLH
Sbjct:    6 PSTMNALFLTSSDKASHNNRPYKLLAGPVPVPNAPQNHLLIRVKAAAVDARDVAICRAWRSLPTRPAQTSPPPPPVPGCALSGVVVTAPPHHPFQPGQHVAALTRFGGAFAPYATVHADECWLTRLPFADAAVTAGAASVAFQAVRVAALKGNDTVAIAGTLTAAGALIARTCRLVYGVNVIAGVHGPHQQAVAQSYANCVVDRSRNKVTAQLGHAVVDVAFDVEGRLEQLCKLVKKGGTVVRVIAATETIKQSQAQRVRAICSARRVNLIRVEGRLDARAVQSTKNLLQTLQICAPSGPAFGIKQWGPALTAAEQGVDVGAVVLLH 332
The following BLAST results are available for this feature:
BLAST of Gcaud8539.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IZU1_9FLOR9.740e-12560.242-methylene-furan-3-one reductase n=1 Tax=Gracilar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.720coord: 146..267
e-value: 1.0E-29
score: 105.7
NoneNo IPR availableGENE3D3.90.180.10coord: 30..322
e-value: 1.0E-29
score: 105.7
NoneNo IPR availablePANTHERPTHR44154QUINONE OXIDOREDUCTASEcoord: 29..251
IPR011032GroES-like superfamilySUPERFAMILY50129GroES-likecoord: 27..159
IPR036291NAD(P)-binding domain superfamilySUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 127..245

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1538_length_9864_cov_4.520004contigNODE_1538_length_9864_cov_4.520004:829..1815 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8539.t1Gcaud8539.t1Gracilaria caudata M_176_S67 malemRNANODE_1538_length_9864_cov_4.520004 829..1815 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8539.t1 ID=Gcaud8539.t1|Name=Gcaud8539.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=329bp
MTELRELPTAMDALFLTRDTKRKRHFNLLAGSVPVPPAAPPHLLVEVKAA
AVSARDIAICRSLRALPGKRHPLRAPVPGCALAGVVVRAPPQSDFKSGET
VAALTRFGGGFGPYAALKPSECWRTHLSFADAAATAGAASAAFQAVRAAG
VAAGYTVAVAGVLTAPGALIAQTCRLVYGARVVAGVHGADQLSAAAKYAD
IVVDRKLEKVTSKIASVPIDVAFDVEGRLEQLCRIVKKGGVVIRVICSAE
RVCEKEAKRVRNLCRKKDITLRRIEGCIDSKAVESTKSLLHTLQLSAPSG
PAFGVRQWGPALRTAEKGVDVGAVLLLH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011032GroES-like_sf
IPR036291NAD(P)-bd_dom_sf