Gcaud8256.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8256.t1
Unique NameGcaud8256.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length169
Homology
BLAST of Gcaud8256.t1 vs. uniprot
Match: A0A2V3J0W9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0W9_9FLOR)

HSP 1 Score: 132 bits (332), Expect = 8.320e-35
Identity = 73/165 (44.24%), Postives = 94/165 (56.97%), Query Frame = 0
Query:    5 EGCIPHECELHFEQVQEYPSSFELQMSLSEKQLNDIDAFVAQHGQEDLNAVDGGMDEGYHCLFDPSPGSKIGGHVSWIQDPESASCAKCRADMRHLLTISSLEVGDPGTRWKAI---VDENGTSVNTDSEMREQLETGLCIGDVGSVYVMECRRCEHRPIRTIFQ 166
            EGC+P EC LH E+V+E+PSS  L +  S      +D  +  HGQED+ AVD      Y  LF  +P SK GGH +W+QD ++  C +C   M HLLT++S E  +   RW AI   V E+G     D +  E   TG+ +GDVGS YVM CRRC   PI T  Q
Sbjct:  132 EGCVPAECALHVEEVEEFPSSMALDVRTSAA----VDEVIKTHGQEDIAAVDADEVNYYDSLFGAAPQSKAGGHAAWMQDEDTVECEQCGERMEHLLTVASEENNESFGRWAAIEEGVGEDGEDGLDDDDEGEG-HTGVMLGDVGSYYVMVCRRCAQWPIATRLQ 291          
BLAST of Gcaud8256.t1 vs. uniprot
Match: UPI000475B36D (hypothetical protein n=1 Tax=Nocardiopsis valliformis TaxID=239974 RepID=UPI000475B36D)

HSP 1 Score: 95.1 bits (235), Expect = 1.650e-20
Identity = 56/162 (34.57%), Postives = 80/162 (49.38%), Query Frame = 0
Query:    8 IPHECELHFEQVQEYPSSFELQMSLSEKQLNDIDAFVAQHGQEDLNAVDGGMDEGYHCLFDPSPGSKIGGHVSWIQDPESASCAKCRADMRHLLTISSLEV-GDPGTRWKAIVDENGTSVNTDSEMREQLETGLCIGDVGSVYVMECRRCEHRPIRTIFQCS 168
            +P  C +H E V +YPS ++L   LS++     +    + G +            Y      +PG K+GG+ SW QDP    C  C   M HLLT+SS+E  GD  + W  + D +G  ++    ++ Q   GL +GD+G VYV ECR C  RP    F CS
Sbjct:  147 VPAPCVVHPEPVVDYPS-WDLPEDLSDQLSERFEQLEKETGWQ------------YEDELAEAPGIKMGGYPSWTQDPLWPECEGCGETMEHLLTVSSVEYDGDGSSTWIPVEDRDGGDLDVRDRVQLQRPHGLMLGDMGGVYVFECRTCPDRPFTHHFDCS 295          
BLAST of Gcaud8256.t1 vs. uniprot
Match: UPI000ACC41BA (DUF1963 domain-containing protein n=1 Tax=Streptomyces nodosus TaxID=40318 RepID=UPI000ACC41BA)

HSP 1 Score: 89.0 bits (219), Expect = 1.170e-18
Identity = 64/164 (39.02%), Postives = 79/164 (48.17%), Query Frame = 0
Query:    9 PHECELHFEQVQEYPSSFELQMSLSEKQLNDIDAFVAQHGQ-EDLNAVDGGMDEGYHCLFDPSPGSKIGGHVSWIQDPESASCAKCRADMRHLLTISSLEV-GDPGTRWKAIVDENGTSVNTDSEMREQLET--GLCIGDVGSVYVMECRRCEHRPIRTIFQCS 168
            P  C +H EQV EYPS       LS       D   A H + E+L A  G +   YH     +PG K+GG+  W Q+P    C  C   M HLLT++S E  G+    W  + D       TDS   E  +   GLC+GDVG VY+ ECR C  RPI   F CS
Sbjct:   88 PDPCVVHPEQVTEYPSR-----DLSR------DTHDALHARFEELKATTG-LYYSYHLA--EAPGIKLGGYPGWTQEPCWPDCEACGDRMEHLLTVASEEFDGESWRTWLPVEDR------TDSGWTEAADNPAGLCLGDVGGVYIFECRTCLDRPIGHWFDCS 231          
BLAST of Gcaud8256.t1 vs. uniprot
Match: A0A1S2PI45_9ACTN (DUF1963 domain-containing protein n=4 Tax=Streptomyces TaxID=1883 RepID=A0A1S2PI45_9ACTN)

HSP 1 Score: 89.4 bits (220), Expect = 2.240e-18
Identity = 62/163 (38.04%), Postives = 81/163 (49.69%), Query Frame = 0
Query:    9 PHECELHFEQVQEYPSSFELQMSLSEKQLNDIDAFVAQHGQEDLNAVDGGMDEGYHCLFDPSPGSKIGGHVSWIQDPESASCAKCRADMRHLLTISSLEV-GDPGTRWKAIVDENGTSVNTDSEMREQLET--GLCIGDVGSVYVMECRRCEHRPIRTIFQCS 168
            P+ C +H EQV EYPS ++L            DA  A+   ++L A  G +   YH     +PG K+GG+  W Q+P    C  C   M HLLT++S E  G+    W  + D       TDS   E  +   GLC+GDVG VY+ ECR C  RPI   F CS
Sbjct:  146 PNPCVVHPEQVTEYPS-WDLSRDTH-------DALQARF--DELKATTG-LYYSYHLA--EAPGIKLGGYPGWTQEPCWPDCEACGGRMEHLLTVASEEFDGESWRTWLPVEDR------TDSGWTEAADNPAGLCLGDVGGVYIFECRTCPDRPIGHWFDCS 289          
BLAST of Gcaud8256.t1 vs. uniprot
Match: A0A7W7MVV2_9ACTN (Uncharacterized protein n=1 Tax=Actinomadura catellatispora TaxID=95160 RepID=A0A7W7MVV2_9ACTN)

HSP 1 Score: 85.9 bits (211), Expect = 3.010e-17
Identity = 59/172 (34.30%), Postives = 82/172 (47.67%), Query Frame = 0
Query:    8 IPHECELHFEQVQEYPSSFELQMSLSEKQLNDIDAFVAQHGQEDLNAVDGGMDEGYHCLFDPSPGSKIGGHVSWIQDPESASCAKCRADMRHLLTISSLEV-GDPGTRWKAIVDE----------NGTSVNTDSEMREQLETGLCIGDVGSVYVMECRRCEHRPIRTIFQCS 168
            IPH C L  E+V E+P   +L   L ++        + Q   E  +      D  Y      +PG+K+GG VSWIQDP   +C +   ++ H+LTI+S E  G     W  + D           NG SV     + +Q    + IGD GS+YV  C RC+HRP  T+ QCS
Sbjct:  108 IPHPCVLSPERVAEFPDPRDLPWDLQQR--------IQQWENEARH------DWSYFYHLSAAPGTKVGGWVSWIQDPIWLTC-EAGHELEHMLTIASWESDGQSWKTWTPVEDRGRIGWHPGNVNGHSVQIPL-VPDQRPADIMIGDAGSMYVFTCTRCDHRPTLTLMQCS 263          
BLAST of Gcaud8256.t1 vs. uniprot
Match: A0A1Q4XDH6_9ACTN (Uncharacterized protein n=1 Tax=Nocardiopsis sp. TSRI0078 TaxID=1718951 RepID=A0A1Q4XDH6_9ACTN)

HSP 1 Score: 85.5 bits (210), Expect = 7.030e-17
Identity = 60/174 (34.48%), Postives = 79/174 (45.40%), Query Frame = 0
Query:    2 DEGEGCIPHECELHFEQVQEYPSSFELQMSLSEKQLNDIDAFVAQHGQEDLNAVDGGMDEGYHCLFDPSPGSKIGGHVSWIQDPESASCAKCRADMRHLLTISSLEVGDPGT--RW-----KAIVDENGTSVNTDSEMREQLETGLCIGDVGSVYVMECRRCEHRPIRTIFQCS 168
            D  EG +P  C +H E V EYP    +   L     +       Q G              Y      +PG K+GG+  W+QD     C  C A+M  LLT++S E  DPG+   W     +A VDE+    + +     Q   GL +GD GSVYV ECR+C  RPI+  F CS
Sbjct:  139 DPPEGTVPVPCVVHPEPVTEYPGWRNMGRDLHTALWDRAARMEEQTGWS------------YEEHLSEAPGIKVGGYPDWVQDAWRMVCDGCGAEMDPLLTVASWEY-DPGSWRSWLPVEERAGVDEHHGPFSFEDAGSAQGAAGLTLGDAGSVYVFECRKCPERPIKYGFDCS 299          
BLAST of Gcaud8256.t1 vs. uniprot
Match: A0A2V3IDQ3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDQ3_9FLOR)

HSP 1 Score: 82.0 bits (201), Expect = 4.750e-16
Identity = 52/163 (31.90%), Postives = 84/163 (51.53%), Query Frame = 0
Query:    8 IPHECELHFEQVQEYPSSFELQMSLSEKQLNDIDAFVAQHGQEDLNAVDGGMDE---GYHCLFDPSPGSKIGGHVSWIQDPESASCAKCRADMRHLLTISSLEVGDPGTRWKAIVDENGTSVNTDSEMREQLETGLCIGDVGSVYVMECRRCEHRPIRTIFQC 167
            +P EC L  E++ E P   +  +      L +++A++A + Q D+  +    +     Y  +F  SPGSK+GG VS++Q+  +  C    A   HLLT+SS + G+ G RW        +S N    +  + +T  C GD GSVY+  CR+C + P+  + QC
Sbjct:   75 VPRECRLFPERITENPPITDPAL------LAEVNAWLADNAQHDMEVMQLPPETRAWAYEGVFAESPGSKVGGFVSYVQEEYTPLCI-FDASTEHLLTLSSGD-GEAGHRWAPSDIPRDSSGNAQCHLVRRSDT--CFGDCGSVYIFICRKCSNWPVYALMQC 227          
BLAST of Gcaud8256.t1 vs. uniprot
Match: A0A2M9L428_9ACTN (DUF1963 domain-containing protein n=2 Tax=Kitasatospora sp. CB02891 TaxID=2020329 RepID=A0A2M9L428_9ACTN)

HSP 1 Score: 82.4 bits (202), Expect = 5.770e-16
Identity = 55/159 (34.59%), Postives = 72/159 (45.28%), Query Frame = 0
Query:    2 DEGEGCIPHECELHFEQVQEYPSSFELQMSLSEKQLNDIDAFVAQHGQEDLNAVDGGMDEGYHCLFDPSPGSKIGGHVSWIQDPESASCAKCRADMRHLLTISSLEVGDPGTRWKAIVDENGTSVNTDSEMREQLETGLCIGDVGSVYVMECRRCEHRP 160
            D G G +P  C +H E V EYPS       LS +  + +DA   Q  +E       G D  Y      +PG+K+GG+  W QDP+   C  C   M HLLT+ S E  D    W  + D +      D          L +GD+G VY+ ECR C  RP
Sbjct:  119 DAGYGRVPRPCVVHPELVTEYPS-----WDLSYELWDALDARFEQVEKET------GWD--YQNHLSTAPGTKLGGYPGWSQDPQWPHCPACGVPMDHLLTVESTEEHDHRQAWTPVEDRDVRREGAD----------LSLGDLGGVYLFECRTCPGRP 254          
BLAST of Gcaud8256.t1 vs. uniprot
Match: A0A4U0NIZ8_9ACTN (DUF1963 domain-containing protein n=2 Tax=Streptomyces piniterrae TaxID=2571125 RepID=A0A4U0NIZ8_9ACTN)

HSP 1 Score: 82.4 bits (202), Expect = 6.030e-16
Identity = 58/166 (34.94%), Postives = 79/166 (47.59%), Query Frame = 0
Query:    6 GCIPHECELHFEQVQEYPSSFELQMSLSEKQLNDIDA-FVAQHGQEDLNAVDGGMDEGYHCLFDPSPGSKIGGHVSWIQDPESASCAKCRADMRHLLTISSLEVGDPGTR--WKAIVDENGTSVNTDSEMREQLETGLCIGDVGSVYVMECRRCEHRPIRTIFQCS 168
            G IP  C +H E V EYPS       L +   + ++  FV    +        G D  YH     +PG+K+GGH  W QDP+   C++C   M HLLT+ S E  D  +R  W  I D++           E  +  L +GD+G VY+ ECR C  RP +  F CS
Sbjct:  123 GRIPKPCVVHPELVIEYPS-----WDLDDGLWDTLEPRFVHVEAET-------GWDYQYH--LSTAPGTKLGGHPGWCQDPQWPDCSECGKPMDHLLTVESTEA-DAVSRLTWTPIEDQDV----------EYEDAALMLGDMGGVYLFECRTCPGRPYKDRFDCS 263          
BLAST of Gcaud8256.t1 vs. uniprot
Match: UPI001E2FF252 (DUF1963 domain-containing protein n=2 Tax=Kitasatospora TaxID=2063 RepID=UPI001E2FF252)

HSP 1 Score: 81.6 bits (200), Expect = 1.280e-15
Identity = 53/157 (33.76%), Postives = 70/157 (44.59%), Query Frame = 0
Query:    4 GEGCIPHECELHFEQVQEYPSSFELQMSLSEKQLNDIDAFVAQHGQEDLNAVDGGMDEGYHCLFDPSPGSKIGGHVSWIQDPESASCAKCRADMRHLLTISSLEVGDPGTRWKAIVDENGTSVNTDSEMREQLETGLCIGDVGSVYVMECRRCEHRP 160
            G G +P  C LH E V EY +S++L   L ++  + ID    + G +            Y      +PG+K+GG   W QDP    C  CR  M HLLT+ S E  DP   W    D +      D          L +GD+G VY+ ECR C  RP
Sbjct:  130 GYGNVPRPCVLHPELVTEY-ASWDLPQELWDELEDRIDRVQRETGWD------------YQDHLSTAPGTKLGGWPGWGQDPRWPCCPGCRRPMDHLLTVESTEESDPRWAWTPAEDRDRGFEGAD----------LSLGDLGGVYLFECRSCPDRP 263          
The following BLAST results are available for this feature:
BLAST of Gcaud8256.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J0W9_9FLOR8.320e-3544.24Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
UPI000475B36D1.650e-2034.57hypothetical protein n=1 Tax=Nocardiopsis vallifor... [more]
UPI000ACC41BA1.170e-1839.02DUF1963 domain-containing protein n=1 Tax=Streptom... [more]
A0A1S2PI45_9ACTN2.240e-1838.04DUF1963 domain-containing protein n=4 Tax=Streptom... [more]
A0A7W7MVV2_9ACTN3.010e-1734.30Uncharacterized protein n=1 Tax=Actinomadura catel... [more]
A0A1Q4XDH6_9ACTN7.030e-1734.48Uncharacterized protein n=1 Tax=Nocardiopsis sp. T... [more]
A0A2V3IDQ3_9FLOR4.750e-1631.90Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2M9L428_9ACTN5.770e-1634.59DUF1963 domain-containing protein n=2 Tax=Kitasato... [more]
A0A4U0NIZ8_9ACTN6.030e-1634.94DUF1963 domain-containing protein n=2 Tax=Streptom... [more]
UPI001E2FF2521.280e-1533.76DUF1963 domain-containing protein n=2 Tax=Kitasato... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.30.320.10coord: 2..167
e-value: 1.1E-8
score: 37.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1520_length_9983_cov_4.292357contigNODE_1520_length_9983_cov_4.292357:1407..1913 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8256.t1Gcaud8256.t1Gracilaria caudata M_176_S67 malemRNANODE_1520_length_9983_cov_4.292357 1407..1913 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8256.t1 ID=Gcaud8256.t1|Name=Gcaud8256.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=169bp
MDEGEGCIPHECELHFEQVQEYPSSFELQMSLSEKQLNDIDAFVAQHGQE
DLNAVDGGMDEGYHCLFDPSPGSKIGGHVSWIQDPESASCAKCRADMRHL
LTISSLEVGDPGTRWKAIVDENGTSVNTDSEMREQLETGLCIGDVGSVYV
MECRRCEHRPIRTIFQCS*
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