Gcaud8253.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8253.t1
Unique NameGcaud8253.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length425
Homology
BLAST of Gcaud8253.t1 vs. uniprot
Match: A0A2V3J7S9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J7S9_9FLOR)

HSP 1 Score: 403 bits (1035), Expect = 6.010e-135
Identity = 223/423 (52.72%), Postives = 277/423 (65.48%), Query Frame = 0
Query:    3 YVKLLFLVLTFNHVFAQT-FCTSTIDLETFLTRSFRANVDLIRLGVPSEIVKRYYDKAVMDMTLTCNCSSATIDENCVSLFFTETMEVAYLRDLLQIESV-SDERRDRFGLLQPNPK--FFPLFRTNLTLHGLSLSQTEELNKDLNHLLLNSQSVVSIQSRYWQRSRFPSDEEFFQDTFEAQKAACDVYQDITNLTNLTFPAWAATAYVIGLVLEVRAAQGNETAAMMMLANHTSLVFNGVRCYRVSGSQLEYPVSKMEQYMMTAKRLLDETNRIFKP-DLRDIRMLSSAPSAYYSDLVTTLSSLRSSGDSETVLITDGKITRLESVNDTLQVD---LPNIELTSPTNMRPECPDGYILASRAVPVVSMDELCCSEKCEFAELSLVDPFAFAINQERCCGLCNYLECTDHNLLPESTPLKYTG 417
            Y+   F V+     FA+   CTSTI L  FL+ SF  N DLIR GVPSE+V +YYD+AVMD+   CNCSS ++DE CV L F E++E++ L+  L  +S+ S  +RD+     P  K   FPL+    TL GLS +QTEELN  L  LL  S+SVVSIQS YWQRSRFPSDE FFQDT+E+QKAAC  YQ  + + N TFPAWAATAYVIGLV EVR AQG  +AA+ +LA H S VFNG RCYRV+G +L  PV KME+Y+ TA++LL+E  +   P  L DIR +S + + ++  LVT LSSL S+GD  TVL+TDG       VN  L  D   L  I L        ECP+ +I  SR +P+ +MDE CC EKCE+A LSL DPF + + QE+CC LCNY  C DH LLPE   LK +G
Sbjct:    2 YLATAFFVILVTRTFARAPKCTSTIGLNAFLSTSFLVNADLIRFGVPSEVVTKYYDRAVMDVARFCNCSSVSVDETCVQLIFEESLELSLLKGALDADSLLSKGQRDQVSPTAPENKVKLFPLYDPGKTLSGLSSTQTEELNSHLTRLLSASKSVVSIQSEYWQRSRFPSDETFFQDTYESQKAACGEYQVASKMDNRTFPAWAATAYVIGLVQEVRKAQGEVSAAIDILAAHASFVFNGARCYRVNGLKLHIPVRKMEEYLATAQKLLNEAGQRSHPIPLNDIRKVSESSATFFPRLVTKLSSLSSNGDGRTVLVTDGTTIERALVNTLLMGDPLLLGEITLGPAAY---ECPERWIRVSRVLPLANMDEQCCPEKCEYAALSLSDPFLYTVTQEKCCELCNYFICKDHTLLPE---LKISG 418          
BLAST of Gcaud8253.t1 vs. uniprot
Match: A0A2V3J4E3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4E3_9FLOR)

HSP 1 Score: 201 bits (511), Expect = 4.080e-57
Identity = 121/326 (37.12%), Postives = 182/326 (55.83%), Query Frame = 0
Query:   22 CTSTIDLETFLTRSFRANVDLIRLGVPSEIVKRYYDKAVMDMTLTCNCSSATIDENCVSLFFTETMEVAYLRDLLQIESVSDERRDRFGLLQPNPKFFPLFRTNLTLHGLSLSQTEELNKDLNHLLLNSQSVVSIQSRYWQRSRFPSDEEFFQDTFEAQKAACDVYQDITNLTNLTFPAWAATAYVIGLVLEVRAAQGNETAAMMMLANHTSLVFNGVRCYRVSGSQLEYPVSKMEQYMMTAKRLLDETNRIFKPDLRDIRMLSSAPSAYYSDLVTTLSSLRSSGDSETVLITDGKITRLESVN-DTLQVDL---PNIELTSPTNM 343
            C + I L TFL  S++AN +LIR G PSEIV+  YD ++++M  +C CS+ T+D+ CV   F    EV+ LR  +  ++ +              K F L+ ++  L  L+ +Q   L     HLL  +    +I+S  WQRS FPSD+ FFQD    QK AC+ +  +T+   LT+PA +ATAYVIGLV  VR A+ +    + +LANHT+ V+NGVRC ++SG +L  PV+ +E Y  T + +L   +      LR++R L      +   LV  LS+L S GDS TVL+ +  +    +V  D +++ L   P++ +TS   M
Sbjct:   26 CNNVISLSTFLNDSYQANANLIRFGAPSEIVRALYDHSLIEMASSCECSTTTVDQFCVHTIFNLDNEVSVLRSTIDTDATT----------VGTDKLFRLYDSSKVLDSLAANQIASLEFCRTHLLSLTPDTTTIKSPAWQRSIFPSDDVFFQDDASGQKDACNTFNAVTHPQGLTYPASSATAYVIGLVQSVRKAKLDMAVPLQILANHTTFVYNGVRCNKLSGDRLHIPVTYLEDYKKTIESILSSASTD-TGILRNVRELLQNSKMFLPSLVDKLSALISYGDSATVLVANAIVGNPSTVTRDLVELTLAADPSLLVTSMPGM 340          
The following BLAST results are available for this feature:
BLAST of Gcaud8253.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J7S9_9FLOR6.010e-13552.72Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J4E3_9FLOR4.080e-5737.12Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..424
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1514_length_10049_cov_4.962442contigNODE_1514_length_10049_cov_4.962442:3533..4807 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8253.t1Gcaud8253.t1Gracilaria caudata M_176_S67 malemRNANODE_1514_length_10049_cov_4.962442 3533..4807 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8253.t1 ID=Gcaud8253.t1|Name=Gcaud8253.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=425bp
MGYVKLLFLVLTFNHVFAQTFCTSTIDLETFLTRSFRANVDLIRLGVPSE
IVKRYYDKAVMDMTLTCNCSSATIDENCVSLFFTETMEVAYLRDLLQIES
VSDERRDRFGLLQPNPKFFPLFRTNLTLHGLSLSQTEELNKDLNHLLLNS
QSVVSIQSRYWQRSRFPSDEEFFQDTFEAQKAACDVYQDITNLTNLTFPA
WAATAYVIGLVLEVRAAQGNETAAMMMLANHTSLVFNGVRCYRVSGSQLE
YPVSKMEQYMMTAKRLLDETNRIFKPDLRDIRMLSSAPSAYYSDLVTTLS
SLRSSGDSETVLITDGKITRLESVNDTLQVDLPNIELTSPTNMRPECPDG
YILASRAVPVVSMDELCCSEKCEFAELSLVDPFAFAINQERCCGLCNYLE
CTDHNLLPESTPLKYTGTPTLISI*
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