Gcaud3074.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud3074.t1
Unique NameGcaud3074.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length210
Homology
BLAST of Gcaud3074.t1 vs. uniprot
Match: UPI001E1DBFC7 (LOW QUALITY PROTEIN: spermidine/putrescine import ATP-binding protein PotA-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DBFC7)

HSP 1 Score: 80.5 bits (197), Expect = 4.350e-14
Identity = 41/66 (62.12%), Postives = 48/66 (72.73%), Query Frame = 0
Query:   73 RTFALYLWLTVLENIELGLSSASRVSRDVIRERSMRAIDIIGFDGYENAYPHELSGN----TGLVR 134
            +TFAL+ WLTVLEN+ELG+ + SRV R   R+R+M AID IG DGYENAYP ELSG      GL R
Sbjct:  163 QTFALFPWLTVLENVELGMIARSRVERAAARKRAMAAIDTIGLDGYENAYPRELSGGMRQRVGLAR 228          
BLAST of Gcaud3074.t1 vs. uniprot
Match: F1ZAQ2_9SPHN (ABC transporter related protein n=4 Tax=Novosphingobium TaxID=165696 RepID=F1ZAQ2_9SPHN)

HSP 1 Score: 74.3 bits (181), Expect = 5.080e-12
Identity = 40/66 (60.61%), Postives = 47/66 (71.21%), Query Frame = 0
Query:   73 RTFALYLWLTVLENIELGLSSASRVSRDVIRERSMRAIDIIGFDGYENAYPHELSGN----TGLVR 134
            +TFAL+ WLTVLEN+E+GL  A RV  D  R RS+ AID+IG DG+ENAYP ELSG      GL R
Sbjct:   86 QTFALFPWLTVLENVEIGLE-ALRVPADEARSRSLAAIDLIGLDGFENAYPKELSGGMRQRVGLAR 150          
BLAST of Gcaud3074.t1 vs. uniprot
Match: A0A0Q5QX59_9SPHN (Nitrate ABC transporter ATP-binding protein n=4 Tax=Proteobacteria TaxID=1224 RepID=A0A0Q5QX59_9SPHN)

HSP 1 Score: 73.6 bits (179), Expect = 9.490e-12
Identity = 40/66 (60.61%), Postives = 47/66 (71.21%), Query Frame = 0
Query:   73 RTFALYLWLTVLENIELGLSSASRVSRDVIRERSMRAIDIIGFDGYENAYPHELSGN----TGLVR 134
            +TFAL+ WLTVL+N+ELGL  A RV  D  R RS+ AID+IG DG+ENAYP ELSG      GL R
Sbjct:   94 QTFALFPWLTVLQNVELGLE-AQRVPADERRTRSLAAIDLIGLDGFENAYPKELSGGMRQRVGLAR 158          
BLAST of Gcaud3074.t1 vs. uniprot
Match: A0A125FZT4_9BURK (Nitrate ABC transporter ATP-binding protein n=18 Tax=Burkholderia TaxID=32008 RepID=A0A125FZT4_9BURK)

HSP 1 Score: 73.6 bits (179), Expect = 9.560e-12
Identity = 36/56 (64.29%), Postives = 45/56 (80.36%), Query Frame = 0
Query:   73 RTFALYLWLTVLENIELGLSSASRVSRDVIRERSMRAIDIIGFDGYENAYPHELSG 128
            +TFALY WLTVLEN+ELGL +   V  DV RERS+ AI++IG DG+E+A+P ELSG
Sbjct:  103 QTFALYPWLTVLENVELGLDALG-VGTDVARERSLAAIELIGLDGFESAFPRELSG 157          
BLAST of Gcaud3074.t1 vs. uniprot
Match: A0A7G1H0X3_9BACT (ABC transporter ATP-binding protein n=3 Tax=root TaxID=1 RepID=A0A7G1H0X3_9BACT)

HSP 1 Score: 73.2 bits (178), Expect = 1.270e-11
Identity = 35/56 (62.50%), Postives = 46/56 (82.14%), Query Frame = 0
Query:   73 RTFALYLWLTVLENIELGLSSASRVSRDVIRERSMRAIDIIGFDGYENAYPHELSG 128
            ++FAL+ WLTVLEN+ELGL S   +S DV RE+S+R +DI+G DG+E+AYP ELSG
Sbjct:   86 QSFALFPWLTVLENVELGLKSQG-LSDDVAREKSVRMLDIVGLDGFEDAYPRELSG 140          
BLAST of Gcaud3074.t1 vs. uniprot
Match: UPI00054BBFC4 (nitrate/sulfonate/bicarbonate ABC transporter ATP-binding protein n=1 Tax=Sphingomonas sp. ERG5 TaxID=1381597 RepID=UPI00054BBFC4)

HSP 1 Score: 73.2 bits (178), Expect = 1.290e-11
Identity = 39/66 (59.09%), Postives = 48/66 (72.73%), Query Frame = 0
Query:   73 RTFALYLWLTVLENIELGLSSASRVSRDVIRERSMRAIDIIGFDGYENAYPHELSGN----TGLVR 134
            +TFAL+ WLTVL+N+ELGL  A RV  D+ R R++ AID+IG DG+ENAYP ELSG      GL R
Sbjct:   92 QTFALFPWLTVLQNVELGLE-ARRVPADMRRARALAAIDLIGLDGFENAYPKELSGGMRQRVGLAR 156          
BLAST of Gcaud3074.t1 vs. uniprot
Match: A0A318J4L8_BURPY (NitT/TauT family transport system ATP-binding protein n=23 Tax=Burkholderia TaxID=32008 RepID=A0A318J4L8_BURPY)

HSP 1 Score: 72.8 bits (177), Expect = 1.770e-11
Identity = 35/56 (62.50%), Postives = 46/56 (82.14%), Query Frame = 0
Query:   73 RTFALYLWLTVLENIELGLSSASRVSRDVIRERSMRAIDIIGFDGYENAYPHELSG 128
            +TFALY WLTVL+N+ELGL  AS + RDVIR R++  I++IG DG+E+A+P ELSG
Sbjct:  104 QTFALYPWLTVLDNVELGLD-ASGLPRDVIRRRALSVIELIGLDGFESAFPRELSG 158          
BLAST of Gcaud3074.t1 vs. uniprot
Match: A0A0Q4JVC8_9SPHN (Nitrate ABC transporter ATP-binding protein n=10 Tax=Sphingomonas TaxID=13687 RepID=A0A0Q4JVC8_9SPHN)

HSP 1 Score: 72.4 bits (176), Expect = 2.380e-11
Identity = 39/66 (59.09%), Postives = 47/66 (71.21%), Query Frame = 0
Query:   73 RTFALYLWLTVLENIELGLSSASRVSRDVIRERSMRAIDIIGFDGYENAYPHELSGN----TGLVR 134
            +TFAL+ WLTVL+N+ELGL  A RV  D  R R++ AID+IG DG+ENAYP ELSG      GL R
Sbjct:   93 QTFALFPWLTVLQNVELGLE-AQRVPADERRTRALAAIDLIGLDGFENAYPKELSGGMRQRVGLAR 157          
BLAST of Gcaud3074.t1 vs. uniprot
Match: A0A3S1GYR0_ELYCH (ABC transporter domain-containing protein (Fragment) n=1 Tax=Elysia chlorotica TaxID=188477 RepID=A0A3S1GYR0_ELYCH)

HSP 1 Score: 68.6 bits (166), Expect = 3.080e-11
Identity = 31/56 (55.36%), Postives = 45/56 (80.36%), Query Frame = 0
Query:   73 RTFALYLWLTVLENIELGLSSASRVSRDVIRERSMRAIDIIGFDGYENAYPHELSG 128
            ++FAL  WLTVL+N+ELGL  A ++ +  +R R+++AID++G DG+ENAYP ELSG
Sbjct:   61 QSFALMPWLTVLQNVELGLE-ARKIEKRQVRRRALKAIDMVGLDGFENAYPKELSG 115          
BLAST of Gcaud3074.t1 vs. uniprot
Match: UPI0015758871 (nitrate/sulfonate/bicarbonate ABC transporter ATP-binding protein n=1 Tax=Sphingomonas bacterium TaxID=1895847 RepID=UPI0015758871)

HSP 1 Score: 72.0 bits (175), Expect = 3.210e-11
Identity = 39/66 (59.09%), Postives = 47/66 (71.21%), Query Frame = 0
Query:   73 RTFALYLWLTVLENIELGLSSASRVSRDVIRERSMRAIDIIGFDGYENAYPHELSGN----TGLVR 134
            +TFAL+ WLTVL+N+ELGL  A RV  D  R R++ AID+IG DG+ENAYP ELSG      GL R
Sbjct:   90 QTFALFPWLTVLQNVELGLE-AQRVPPDERRTRALAAIDLIGLDGFENAYPKELSGGMRQRVGLAR 154          
The following BLAST results are available for this feature:
BLAST of Gcaud3074.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001E1DBFC74.350e-1462.12LOW QUALITY PROTEIN: spermidine/putrescine import ... [more]
F1ZAQ2_9SPHN5.080e-1260.61ABC transporter related protein n=4 Tax=Novosphing... [more]
A0A0Q5QX59_9SPHN9.490e-1260.61Nitrate ABC transporter ATP-binding protein n=4 Ta... [more]
A0A125FZT4_9BURK9.560e-1264.29Nitrate ABC transporter ATP-binding protein n=18 T... [more]
A0A7G1H0X3_9BACT1.270e-1162.50ABC transporter ATP-binding protein n=3 Tax=root T... [more]
UPI00054BBFC41.290e-1159.09nitrate/sulfonate/bicarbonate ABC transporter ATP-... [more]
A0A318J4L8_BURPY1.770e-1162.50NitT/TauT family transport system ATP-binding prot... [more]
A0A0Q4JVC8_9SPHN2.380e-1159.09Nitrate ABC transporter ATP-binding protein n=10 T... [more]
A0A3S1GYR0_ELYCH3.080e-1155.36ABC transporter domain-containing protein (Fragmen... [more]
UPI00157588713.210e-1159.09nitrate/sulfonate/bicarbonate ABC transporter ATP-... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 74..128

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1510_length_10070_cov_5.324281contigNODE_1510_length_10070_cov_5.324281:2766..6003 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud3074.t1Gcaud3074.t1Gracilaria caudata M_176_S67 malemRNANODE_1510_length_10070_cov_5.324281 2766..6003 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud3074.t1 ID=Gcaud3074.t1|Name=Gcaud3074.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=210bp
LQEYDPASVPLRDNTNGVVCCIHQYKELRRIAVQSICGYHRLDILCHSAG
QGSFFMPVLIKAGDWAHNLLNDRTFALYLWLTVLENIELGLSSASRVSRD
VIRERSMRAIDIIGFDGYENAYPHELSGNTGLVRNRPFFYEGKTAVGGAR
YNPTYDSGLEVFCRRVANEVVPPRLCITQLPSSSSANRFKLSMVARYKTP
SPVNYQSRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase