Gcaud7027.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7027.t1
Unique NameGcaud7027.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length650
Homology
BLAST of Gcaud7027.t1 vs. uniprot
Match: A0A2V3IJB2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJB2_9FLOR)

HSP 1 Score: 606 bits (1562), Expect = 2.410e-208
Identity = 362/663 (54.60%), Postives = 436/663 (65.76%), Query Frame = 0
Query:    1 MTAQPRPTRRVSKRRRERSVPPVPTEGFARDELDSDDSA---------------------PKEPHFEVDDLDSTDDEQLDSEQAAFPSPQRHILGFTDAIFASDDXXXXPDFELASAQPLPSPPSLPTEEALXXXXXXXXXXXXXXXXXXDVRFPLESAQQAIQAHNTLQSSESSPPSPHHDMTYAQFLQALNSTAPAEPQSVPDALSQLLDDDDEFDYMREAANVRDDPLEFREDLPVSRREVAQLLSERDRALRRQKRQRTRRVASATRASSITPLFPPNLMPAPHTTIPFPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQIQQQALP--PGAVVSLSPACLAQFRDQLKAFVQILAHVHANCAKSVRLSGDEHLDPVTKNVHQQSEIMLKRVVENRSISISYHAMLETHIMHMARFSDGLSFRQFEKCFSEQNRKRSVYEIEGLADVEAFLNDCKTIALDQMPNRALERMDRVSQRHLKQALVTRKRQFTLSGAREGWFMWTAEDDRLLALTIAKYGREVAEYSKDLLPHRLEEDCQARVRHLCSRRCTDNAVKRQMTLISAPLNQQEVKLVQQGLRMFGECVEDQEVWKRIQRELLPGRQWSLLQKLWMWREARKKTKARYRAKVNQKKKAMKNAAK 640
            M+A+PRP RRVSKRRR    P V  EGF RDELDSDD A                     P+EPHFEVDDLDSTDD+     QAA    +   +GF D  FAS+D    PDFEL  A  LPSPP  P    L       XXXXXXXXXXX     +    Q +Q     +SS+S P +P  D+TYAQFLQALN +  + P   P+A +QLLDDDDEFDYMREAANV+DDPLEFR DL VSRREVAQLLSERD ALR Q++QR RR ASA +  ++    P NL+PA H  I                                                      +  ++LP  PG ++ L+P  ++ F++Q KAFVQILAHVHAN +KS R+S D      TK    +SE MLKRVV NR +S SYH ML+ H+MH++RFSD L +R FE+CF ++NR++S Y I+G   +E F++DC+T+ ++Q+P+ A+ R+D V + HLKQAL TRKRQFTL+GAREGWF WTAEDDRLLALTIAKYGREV EY+KDLLPHRLE DCQARVRHL SRRC DNAVKRQ+  ISAPLNQQEV LVQ GL+ FG  VED +VWKRIQRELLPGRQWSLLQKLW+WRE RKKTKARYRAK +++K+A+++A K
Sbjct:    1 MSARPRPCRRVSKRRRVEPFPSVTAEGFTRDELDSDDPAEHAPQHAKLHSSFAHLSDSLIPEEPHFEVDDLDSTDDDHFPPNQAATTLAEPQPIGFADVPFASEDEEDDPDFELNPAYALPSPPPSPXXXXLPFNLASFXXXXXXXXXXXXASGAIIHQPQPVQVQEVPKSSDSGPVTPSRDLTYAQFLQALNPSIASSPVP-PEAFNQLLDDDDEFDYMREAANVQDDPLEFRNDLLVSRREVAQLLSERDIALRSQRKQRARRSASAAKPPAVPLSLPQNLVPA-HAPI-----------------------------------------VAGGHACAAAPAPMPMRSLPLLPGTIMPLNPLSISHFQEQFKAFVQILAHVHANASKSFRMSDDGQSHQDTKQTLDRSERMLKRVVLNRQLSASYHDMLDKHVMHISRFSDELGYRAFEQCFRKENRRKSAYAIDGFESIEMFMSDCRTLPVEQLPSGAVARLDIVCRPHLKQALSTRKRQFTLTGAREGWFTWTAEDDRLLALTIAKYGREVGEYAKDLLPHRLEGDCQARVRHLSSRRCADNAVKRQVMHISAPLNQQEVALVQYGLQSFGSRVEDCDVWKRIQRELLPGRQWSLLQKLWLWRETRKKTKARYRAKESERKRALRDARK 620          
BLAST of Gcaud7027.t1 vs. uniprot
Match: R7Q8N9_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q8N9_CHOCR)

HSP 1 Score: 288 bits (736), Expect = 8.840e-84
Identity = 195/501 (38.92%), Postives = 262/501 (52.30%), Query Frame = 0
Query:  164 YAQFLQAL----NSTAPAEPQSVPDAL---SQLLDDDDEFDYMREAANVRDDPLEFREDLPVSRREVAQLLSERDRALRRQKRQ-------RTRRVASATRASSITPLFPPNLMPAPHTTIPFPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQIQQQALPPGAVVSLSPACLAQFRDQLKAFVQILAHVHANCAKSVRLS--------GDEHLDPVTKNVH-QQSEIMLKRVVENRSISISYHAMLETHIMHMARFSDGLSFRQFEKCFSEQNRKRSVYEIEGLADVEAFLNDCKTIALDQMPNRALERMDRVSQRHLKQALVTRK--RQFTLSGAREGWFMWTAEDDRLLALTIAKYG-REVAEYSKDLLPHRLEEDCQARVRHLCSRRCTDNAVKRQMTLISAPLNQQEVKLVQQGLRMFGE--CVEDQEVWKRIQRELLPGRQWSLLQKLWMWREARKKTKARYRAKVNQKKKAMK 636
            Y QFL  +            + VP  L   S  LDDDD+FDY+RE+A V+DDPLE+R+DL VSR+E+ QL S     LRRQ R        + R+   + RA  I+     +  PA   + P P                                                         P    ++L   C+    +Q+   VQ+L  VHA   K  R +         +E +D  T N    +SE++L+ +VEN+ +S  YH  L T++  +  FS+ L  R     F  +  K S Y +  L  +E F++DC+   L++MP   L R        + QA+ TR   RQ++ SG R GWF WTA DD LLA+T+AKYG  EV ++SKDLLPHR E+DCQ RV++L SRRC DN VKRQ+ LI++PLN  EV+ V +GL MFG   C++D  VWKRIQ ELLPGR+WS LQKLW WRE R+K KA+YRA+  +KKKAMK
Sbjct:  256 YQQFLMGILAESGDRVTEGSRDVPGGLPPPSWALDDDDDFDYLRESARVQDDPLEYRDDLQVSRKELVQLFSNSTVGLRRQTRHSRASQTVKPRQSNRSIRALPISRTL--SSAPAAAASAPHPVVNGAVSNTLRSQTGPSANRSVPTPYIGS----------------------------PNAPFINLPVHCVNMLHEQMSIHVQLLTAVHAKAKKVSRSAREPRFESGANETVDISTANAAANRSEVLLRGLVENKKVSALYHQALATNLSRLKAFSEKLLHRDGNAAFKYETCKTSAYNLPVLDLLEQFISDCRNANLEEMPGNVLARFKPFHNPQISQAMWTRPQGRQYSASGLRPGWFSWTAGDDFLLAITMAKYGSNEVGQFSKDLLPHRKEDDCQTRVKYLSSRRCPDNPVKRQVMLITSPLNNYEVEQVTRGLSMFGRGACLDDAAVWKRIQAELLPGREWSHLQKLWHWRETRRKYKAKYRARSYKKKKAMK 726          
The following BLAST results are available for this feature:
BLAST of Gcaud7027.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IJB2_9FLOR2.410e-20854.60Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q8N9_CHOCR8.840e-8438.92Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 621..641
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 139..164
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..164
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 29..48
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 503..545
e-value: 0.00516369
score: 33.3178

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_148_length_43424_cov_4.421157contigNODE_148_length_43424_cov_4.421157:31805..33754 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7027.t1Gcaud7027.t1Gracilaria caudata M_176_S67 malemRNANODE_148_length_43424_cov_4.421157 31805..33754 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7027.t1 ID=Gcaud7027.t1|Name=Gcaud7027.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=650bp
MTAQPRPTRRVSKRRRERSVPPVPTEGFARDELDSDDSAPKEPHFEVDDL
DSTDDEQLDSEQAAFPSPQRHILGFTDAIFASDDDDDDPDFELASAQPLP
SPPSLPTEEALPFTLAHFASEDEDDDPDFDVRFPLESAQQAIQAHNTLQS
SESSPPSPHHDMTYAQFLQALNSTAPAEPQSVPDALSQLLDDDDEFDYMR
EAANVRDDPLEFREDLPVSRREVAQLLSERDRALRRQKRQRTRRVASATR
ASSITPLFPPNLMPAPHTTIPFPSITPPAPVVAVPARAPSAPIPAVASVA
APGPAPAPAPAAPVITQNAAAATQIQQQALPPGAVVSLSPACLAQFRDQL
KAFVQILAHVHANCAKSVRLSGDEHLDPVTKNVHQQSEIMLKRVVENRSI
SISYHAMLETHIMHMARFSDGLSFRQFEKCFSEQNRKRSVYEIEGLADVE
AFLNDCKTIALDQMPNRALERMDRVSQRHLKQALVTRKRQFTLSGAREGW
FMWTAEDDRLLALTIAKYGREVAEYSKDLLPHRLEEDCQARVRHLCSRRC
TDNAVKRQMTLISAPLNQQEVKLVQQGLRMFGECVEDQEVWKRIQRELLP
GRQWSLLQKLWMWREARKKTKARYRAKVNQKKKAMKNAAKRGSNALASG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb