Gcaud1891.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1891.t1
Unique NameGcaud1891.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length180
Homology
BLAST of Gcaud1891.t1 vs. uniprot
Match: A0A2V3J5Y8_9FLOR (ADP-ribosylation factor 3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5Y8_9FLOR)

HSP 1 Score: 322 bits (826), Expect = 5.510e-111
Identity = 160/180 (88.89%), Postives = 170/180 (94.44%), Query Frame = 0
Query:    1 MGNIIS-LFTSLMGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVESVSYKNIDFTVWDVGGQDKIRPLWRHYFQNTHGVIFVVDSNDRARFAEAREELNKMMMEDELRNAVLLVFANKQDLPNAANTADIVNALGLPELRSHPWYIMSCCATTGAGLYEGLDWLANKLKDV 179
            MGN IS +F SL+GKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVESVSYKNIDFTVWDVGGQDKIRPLWR+YFQNT G+IFVVDSND+ARF EAREEL KMM E+ELRNAVLLVFANKQDLPNAA+TA++VNALGLPELRSH WYIMSCCAT GAGL+EGLDWLA KLKDV
Sbjct:    1 MGNFISSVFASLIGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVESVSYKNIDFTVWDVGGQDKIRPLWRYYFQNTQGIIFVVDSNDQARFPEAREELAKMMAEEELRNAVLLVFANKQDLPNAASTAEVVNALGLPELRSHQWYIMSCCATNGAGLHEGLDWLAAKLKDV 180          
BLAST of Gcaud1891.t1 vs. uniprot
Match: A1XKU0_SUBDO (Arf1 n=1 Tax=Suberites domuncula TaxID=55567 RepID=A1XKU0_SUBDO)

HSP 1 Score: 292 bits (747), Expect = 6.260e-99
Identity = 142/177 (80.23%), Postives = 156/177 (88.14%), Query Frame = 0
Query:    1 MGNIISLFTSLMGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVESVSYKNIDFTVWDVGGQDKIRPLWRHYFQNTHGVIFVVDSNDRARFAEAREELNKMMMEDELRNAVLLVFANKQDLPNAANTADIVNALGLPELRSHPWYIMSCCATTGAGLYEGLDWLANKLK 177
            MGNI SLF SL GKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVE+V YKNI FTVWDVGGQDKIRPLWRHYFQNT G+IFVVDSNDR R +EAREE+N+M+ EDELR+AVLLVFANKQDLPNA N A+I + LGL  LR+  WYI + CAT+G GLYEGLDWL+ +LK
Sbjct:    1 MGNIASLFKSLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERISEAREEMNRMLQEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSQQLK 177          
BLAST of Gcaud1891.t1 vs. uniprot
Match: M2WZR6_GALSU (ADP-ribosylation factor n=2 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2WZR6_GALSU)

HSP 1 Score: 291 bits (746), Expect = 8.580e-99
Identity = 141/175 (80.57%), Postives = 157/175 (89.71%), Query Frame = 0
Query:    3 NIISLFTSLMGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVESVSYKNIDFTVWDVGGQDKIRPLWRHYFQNTHGVIFVVDSNDRARFAEAREELNKMMMEDELRNAVLLVFANKQDLPNAANTADIVNALGLPELRSHPWYIMSCCATTGAGLYEGLDWLANKLK 177
            +I  L + L GKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVE+V YKNI FTVWDVGGQDKIRPLWRHYFQNT GVIFVVDSNDR RF EAREEL+KM+ E+ELR+AVLLVFANKQDLPNAA+TA++VNAL LP LR+  W+IMSCCAT G GL+EGLDWL+++L 
Sbjct:    4 SISKLLSRLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGVIFVVDSNDRERFPEAREELHKMLSEEELRDAVLLVFANKQDLPNAASTAEVVNALALPSLRNRTWFIMSCCATNGDGLFEGLDWLSDQLS 178          
BLAST of Gcaud1891.t1 vs. uniprot
Match: A0A5J4YZ74_PORPP (ADP-ribosylation factor 1 n=2 Tax=Porphyridiaceae TaxID=2799 RepID=A0A5J4YZ74_PORPP)

HSP 1 Score: 289 bits (740), Expect = 7.290e-98
Identity = 140/173 (80.92%), Postives = 153/173 (88.44%), Query Frame = 0
Query:    7 LFTSLMGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVESVSYKNIDFTVWDVGGQDKIRPLWRHYFQNTHGVIFVVDSNDRARFAEAREELNKMMMEDELRNAVLLVFANKQDLPNAANTADIVNALGLPELRSHPWYIMSCCATTGAGLYEGLDWLANKLKDV 179
            LF SL GKK+MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVE+V YKNI FTVWDVGGQDKIRPLWRHYFQNT G+IFVVDSNDR RF EAREEL+KM+ E+ELRNAVLLVFANKQDLPNAA+TA++ NAL LP LR   WYI +CCAT G GL+EGLDWL+ +L  V
Sbjct:    8 LFDSLWGKKDMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRDRFVEAREELHKMLGEEELRNAVLLVFANKQDLPNAASTAELANALQLPNLRQRSWYIQACCATNGEGLFEGLDWLSEELGKV 180          
BLAST of Gcaud1891.t1 vs. uniprot
Match: UPI001CD83122 (ADP-ribosylation factor 2-like n=1 Tax=Solea senegalensis TaxID=28829 RepID=UPI001CD83122)

HSP 1 Score: 289 bits (739), Expect = 1.000e-97
Identity = 139/179 (77.65%), Postives = 156/179 (87.15%), Query Frame = 0
Query:    1 MGNIISLFTSLMGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVESVSYKNIDFTVWDVGGQDKIRPLWRHYFQNTHGVIFVVDSNDRARFAEAREELNKMMMEDELRNAVLLVFANKQDLPNAANTADIVNALGLPELRSHPWYIMSCCATTGAGLYEGLDWLANKLKDV 179
            MG   S+F S+ GKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVE+V YKNI FTVWDVGGQDKIRPLWRHYFQNT G+IFVVDSNDR R  EAREELN+M+ EDELR+AVLLVFANKQDLPNA N A++   LGLP LR+  WYI + CAT+G GLYEGLDWL+++LK++
Sbjct:    1 MGAFQSIFKSIFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERITEAREELNRMLAEDELRDAVLLVFANKQDLPNACNAAELTEKLGLPSLRNRNWYIQATCATSGDGLYEGLDWLSHELKNL 179          
BLAST of Gcaud1891.t1 vs. uniprot
Match: T1JZZ1_TETUR (Uncharacterized protein n=5 Tax=Bilateria TaxID=33213 RepID=T1JZZ1_TETUR)

HSP 1 Score: 288 bits (736), Expect = 2.970e-97
Identity = 141/178 (79.21%), Postives = 155/178 (87.08%), Query Frame = 0
Query:    1 MGNIIS-LFTSLMGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVESVSYKNIDFTVWDVGGQDKIRPLWRHYFQNTHGVIFVVDSNDRARFAEAREELNKMMMEDELRNAVLLVFANKQDLPNAANTADIVNALGLPELRSHPWYIMSCCATTGAGLYEGLDWLANKLK 177
            MGN+ + LF  L GKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVE+V YKNI FTVWDVGGQDKIRPLWRHYFQNT G+IFVVDSNDR R  EAREELN+M+ EDELR+AVLL+FANKQDLPNA N A+I + LGL  LRS  WYI + CAT+G GLYEGLDWL+N+LK
Sbjct:    1 MGNVFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELNRMLAEDELRDAVLLIFANKQDLPNAMNAAEITDKLGLHSLRSRNWYIQATCATSGDGLYEGLDWLSNQLK 178          
BLAST of Gcaud1891.t1 vs. uniprot
Match: A0A6F9D7D1_9ASCI (ADP-ribosylation factor 1 n=2 Tax=Phallusia mammillata TaxID=59560 RepID=A0A6F9D7D1_9ASCI)

HSP 1 Score: 287 bits (735), Expect = 4.210e-97
Identity = 139/171 (81.29%), Postives = 150/171 (87.72%), Query Frame = 0
Query:    7 LFTSLMGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVESVSYKNIDFTVWDVGGQDKIRPLWRHYFQNTHGVIFVVDSNDRARFAEAREELNKMMMEDELRNAVLLVFANKQDLPNAANTADIVNALGLPELRSHPWYIMSCCATTGAGLYEGLDWLANKLK 177
            LF+SL GKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVE+V YKNI FTVWDVGGQDKIRPLWRHYFQNT G+IFVVDSNDR R  EAREELN+M+ EDELR+A+LLVFANKQDLPNA   ADI   LGL  +R+  WYI S CAT+G GLYEGLDWL+NKLK
Sbjct:    8 LFSSLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRERVCEAREELNRMLAEDELRDAILLVFANKQDLPNAMKAADISEKLGLTSMRAREWYIQSACATSGDGLYEGLDWLSNKLK 178          
BLAST of Gcaud1891.t1 vs. uniprot
Match: A0A668AD65_9TELE (ADP-ribosylation factor 1-like n=2 Tax=Bilateria TaxID=33213 RepID=A0A668AD65_9TELE)

HSP 1 Score: 287 bits (734), Expect = 5.780e-97
Identity = 141/178 (79.21%), Postives = 154/178 (86.52%), Query Frame = 0
Query:    1 MGNIISLFTSLMGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVESVSYKNIDFTVWDVGGQDKIRPLWRHYFQNTHGVIFVVDSNDRARFAEAREELNKMMMEDELRNAVLLVFANKQDLPNAANTADIVNALGLPELRSHPWYIMSCCATTGAGLYEGLDWLANKLKD 178
            MGN  SLF +L GKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVE+V YKNI FTVWDVGGQDKIRPLWRHYFQNT G+IFVVDSNDR R  EAREEL +M+ EDELR+AVLLVFANKQDLPNA N A+I + LGL  LR   WYI + CAT+G GLYEGLDWL+N+LK+
Sbjct:    1 MGNFASLFKNLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERINEAREELARMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLKN 178          
BLAST of Gcaud1891.t1 vs. uniprot
Match: A0A7S1XG34_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XG34_9RHOD)

HSP 1 Score: 286 bits (731), Expect = 1.600e-96
Identity = 137/171 (80.12%), Postives = 152/171 (88.89%), Query Frame = 0
Query:    7 LFTSLMGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVESVSYKNIDFTVWDVGGQDKIRPLWRHYFQNTHGVIFVVDSNDRARFAEAREELNKMMMEDELRNAVLLVFANKQDLPNAANTADIVNALGLPELRSHPWYIMSCCATTGAGLYEGLDWLANKLK 177
            +F  L GK+EMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVE+V YKNI FTVWDVGGQD+IRPLWRHYFQNT GVIFVVDSNDR RF+EA EEL+KM+ E+ELR+A LLVFANKQDLPNAA T+++VNAL LP LR   WYIMSCCAT G GL+EGLDWL+N+L 
Sbjct:    8 IFAQLFGKQEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDRIRPLWRHYFQNTQGVIFVVDSNDRERFSEASEELHKMLGEEELRDAALLVFANKQDLPNAALTSEVVNALDLPNLRQRNWYIMSCCATNGEGLFEGLDWLSNQLS 178          
BLAST of Gcaud1891.t1 vs. uniprot
Match: T1FMZ1_HELRO (Uncharacterized protein n=18 Tax=Eumetazoa TaxID=6072 RepID=T1FMZ1_HELRO)

HSP 1 Score: 286 bits (731), Expect = 1.660e-96
Identity = 139/177 (78.53%), Postives = 152/177 (85.88%), Query Frame = 0
Query:    1 MGNIISLFTSLMGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVESVSYKNIDFTVWDVGGQDKIRPLWRHYFQNTHGVIFVVDSNDRARFAEAREELNKMMMEDELRNAVLLVFANKQDLPNAANTADIVNALGLPELRSHPWYIMSCCATTGAGLYEGLDWLANKLK 177
            MGN++ LF  L GKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVE+V YKNI FTVWDVGGQDKIRPLWRHYFQNT G+IFVVDSNDR R  EAREEL +M+ EDELR+AVLLVFANKQDLPNA N A+I + LGL  LR   WYI + CAT+G GLYEGLDWL+ +LK
Sbjct:    1 MGNLLGLFRGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVGEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRDWYIQATCATSGDGLYEGLDWLSTQLK 177          
The following BLAST results are available for this feature:
BLAST of Gcaud1891.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J5Y8_9FLOR5.510e-11188.89ADP-ribosylation factor 3 n=1 Tax=Gracilariopsis c... [more]
A1XKU0_SUBDO6.260e-9980.23Arf1 n=1 Tax=Suberites domuncula TaxID=55567 RepID... [more]
M2WZR6_GALSU8.580e-9980.57ADP-ribosylation factor n=2 Tax=Galdieria sulphura... [more]
A0A5J4YZ74_PORPP7.290e-9880.92ADP-ribosylation factor 1 n=2 Tax=Porphyridiaceae ... [more]
UPI001CD831221.000e-9777.65ADP-ribosylation factor 2-like n=1 Tax=Solea seneg... [more]
T1JZZ1_TETUR2.970e-9779.21Uncharacterized protein n=5 Tax=Bilateria TaxID=33... [more]
A0A6F9D7D1_9ASCI4.210e-9781.29ADP-ribosylation factor 1 n=2 Tax=Phallusia mammil... [more]
A0A668AD65_9TELE5.780e-9779.21ADP-ribosylation factor 1-like n=2 Tax=Bilateria T... [more]
A0A7S1XG34_9RHOD1.600e-9680.12Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
T1FMZ1_HELRO1.660e-9678.53Uncharacterized protein n=18 Tax=Eumetazoa TaxID=6... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006689Small GTPase superfamily, ARF/SAR typePRINTSPR00328SAR1GTPBPcoord: 73..98
score: 34.62
coord: 18..41
score: 52.45
coord: 118..139
score: 30.21
coord: 46..70
score: 36.24
IPR006689Small GTPase superfamily, ARF/SAR typeSMARTSM00178sar_sub_1coord: 1..176
e-value: 3.3E-27
score: 106.4
IPR006689Small GTPase superfamily, ARF/SAR typePFAMPF00025Arfcoord: 6..175
e-value: 2.3E-76
score: 255.2
NoneNo IPR availableSMARTSM00177arf_sub_2coord: 1..179
e-value: 3.1E-113
score: 392.2
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 17..179
e-value: 0.0025
score: -68.1
NoneNo IPR availablePANTHERPTHR11711:SF383ADP-RIBOSYLATION FACTOR A1Bcoord: 4..176
NoneNo IPR availablePROSITEPS51417ARFcoord: 10..176
score: 24.311863
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 15..139
e-value: 2.3E-23
score: 80.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 6..179
e-value: 5.6E-79
score: 266.1
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 13..177
IPR024156Small GTPase superfamily, ARF typePANTHERPTHR11711ADP RIBOSYLATION FACTOR-RELATEDcoord: 4..176
IPR045872ADP-ribosylation factor 1-5CDDcd04150Arf1_5_likecoord: 17..174
e-value: 5.76935E-109
score: 305.871

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1484_length_10307_cov_4.493148contigNODE_1484_length_10307_cov_4.493148:2740..3374 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1891.t1Gcaud1891.t1Gracilaria caudata M_176_S67 malemRNANODE_1484_length_10307_cov_4.493148 2740..3374 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1891.t1 ID=Gcaud1891.t1|Name=Gcaud1891.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=180bp
MGNIISLFTSLMGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGF
NVESVSYKNIDFTVWDVGGQDKIRPLWRHYFQNTHGVIFVVDSNDRARFA
EAREELNKMMMEDELRNAVLLVFANKQDLPNAANTADIVNALGLPELRSH
PWYIMSCCATTGAGLYEGLDWLANKLKDV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006689Small_GTPase_ARF/SAR
IPR005225Small_GTP-bd_dom
IPR027417P-loop_NTPase
IPR024156Small_GTPase_ARF
IPR045872Arf1-5-like