Gcaud2547.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2547.t1
Unique NameGcaud2547.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length1176
Homology
BLAST of Gcaud2547.t1 vs. uniprot
Match: A0A2V3J6T6_9FLOR (Crossover junction endonuclease MUS81 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6T6_9FLOR)

HSP 1 Score: 561 bits (1445), Expect = 8.670e-178
Identity = 414/1181 (35.06%), Postives = 633/1181 (53.60%), Query Frame = 0
Query:   18 LQTEFENATGEWIRKALRTAIKNVRSCRRVILTREDALEINGVGDYIASVIETYLNECPPFPDGIPEHILQAQREAQPSTSNNRSVREGRERGXXXXXXXXXXXXXXXXXXXXXDQTGVQSSSLMDLQQDSNSICQSRSVSTPTQNQTRSREGTPRKRARKEYVPRVGTATASLLIAMLKALDDEDLSELKKEDLAKRAERYTTEKILGVRSGDKNSWYDGWSGMNPQLISKGLVTKRGKPLVFKLTDKGVQTARICFEQYEDLRKRRQLKYEDEGALETSAMPPSVPQSSEVRGNDDDEICIVPVSSSPRLSNKSRYNGGSKRGPRHVQPQRGKGRSAREAFSASEDTPIEDTMSEEQCDDFQLAKRLQEEFDGELGHSHVTQHAPPSTTSTDFREPQNLSRFVNFG---RPEAARSLRDADMDRGIRLARKYAAGEEFGTTSIARRRNSVP--QNEVPGARANQPSETKSLREDDKRHESNQSDIHQADKSSLVSSRNGSARRRKLAGAPLQRVCRVFEELEKEGESRQDLIMIAGEMFDQGKLPKTENALTKALRETMRAVQEAENEERNPPEPMDLVLTTLGGSGSHPKDDHDSSGDEVNRIRKTFEKRAQNPSARGNPSRSNPFSSEEDGIIDLIDGDDISNNDDVNHVHSVDSEEEGLNQIPNDVQV---PRTPENYVKSDLDYSGALEEETRVIDLV-NES-QSLPFVPRNTSRSSHQKSRDQEEVIVIDGNYTSSDAK---------RESLVERSGKRSVIGEDDRAPRSFSGKKQIIPSTEEPIYIESDDDENGSRNSIHDQGFQRISSTPPVTPVTGELCSRERNVRNATDFRQSSSMTTPRIDNPQRRRPHVQDEVNIC-RSNDQTSAAKQQVIDLESMDLERSQDPVVASGPSFNNRLCNEE-----CKVILVVDSMERLEQHRSQIISSFPELLRENNIMCDVRRLPCGDALFLAQFNDGTEFVLDYIFERKTISDYGLSMSDGRIARQSYLLLHSNISNPLLIIEGDMKANSQVYNQPRMHSKLAELEVCADVYVKRTSNIRDTAHFYGSILRILQRK-CGTMSRSKIIEGRMKFSEWSDRIDRIKRKTTLEELFMLQLLSLEGLGIGRARSISNLGYRTPQSLHQAYETKKNMHEKEALLNSRGSGIGRKISSAVAHLFCSEDYNT 1172
            L  +    +G+ +++AL+ AI+N+   R  ILT+ DAL I GVG+YIA++IE +L E PPFPDG+P+ +L A+    P TS  R            XXXXXXXXX          ++    S L++   D   +  +      +   +    G  R RA   Y+PRV +A A+LL+A+L  L++ D+    K DL  RA+ Y +++++  R+GD NSW+DGW+ MN QL+SKGLV KRG+P  F LTDKG++ AR+C +++ ++ KR   +Y  E     S M P+  +S++    DDD +C VP SS   L   S +   S  G   + PQR    SARE F    D   +  +S+EQ D F +A   Q EF G+ GH+       PS T    R+   L+  V +G   R  A+R +  ++   G+ L RKY  GEEFG  S  R        ++ +   + N+PS             SN S  HQ+           + RRRK++ A   R  RV E LEK+G SRQDLIMIA  M   GK P+ ++ L KA+ +T+ AVQ+AE++ ++   P+ +  ++L          ++ +G+ +  +     + A+       P R+ P   E      L+                 DSE       P + +V   PRT  + +K          E+  VIDLV NE+ ++ P    N   + H KS D   +IV+D + +S D +         +ES  E     +++   DR  +S   K+    +++E + + SDD+ + +    +    + +  +     V      +E+      D+++S  +    + N Q   P  +    +  R    T +A+    D++   ++ S      + P  N+ + +E      C+++L++DS ER+  ++ Q  SSF E+L+  NI  DVR+LPCGD LF+A+F+DGTE ++DY+ ERKT+ DYG SMSDGRI++QSY+LL+S I N +LI+EGD+K NS +Y+QPRMHSKLAELEVCA+VYVK+T +++DT HFYG ILR LQ K CGT S+++++ GR  FSEW   +   K+  TLE++FMLQL    G+G+ +A++I ++GY+TPQ L +AY+ K+ M EKE +LN  GS IG  +S +VA +F    Y++
Sbjct:    2 LHEQIACVSGDRLKQALQKAIRNIIPLRFPILTKRDALSIKGVGEYIANLIEAFLVENPPFPDGVPQPVLGAEMHPSPFTSGARGX----------XXXXXXXXXPSTRGRRRTKRSDTAPSLLLNSDDDEPHVLPAAQKPFSSVGASIPPRGGKRTRA---YIPRVNSAPAALLMALLDGLEN-DIESFIKADLVPRAQLYFSDQMVKNRNGDTNSWHDGWTSMNSQLVSKGLVDKRGRPARFGLTDKGIEIARLCRQRHLEVEKRTVSQYNGETRGTASGMSPAFNRSTQ--DLDDDVVC-VPASSLSSLGKSSNFRLDST-GNASI-PQR----SARE-FQQVSDMRSDGRLSQEQTDRF-VALEPQLEF-GQKGHAGTVVQMRPSGTDVTARQATGLNELVGYGGTSRRNASRRMNASEERCGLSLRRKYDVGEEFGIASDRRAPTDCSDIRSPIQAPQVNRPSS------------SNHSAPHQS-----------TERRRKISPAQCDRAVRVIERLEKDGNSRQDLIMIADAMLAAGKFPRDDDTLFKAMSDTLWAVQQAESKSQDTSRPLQVQFSSL----------NNETGNLLLEVSPGRNQEAE-------PVRNTPKDWEY-----LL----------------YDSE-------PEESRVRSGPRTKTSLMKEP---RSCEREDGSVIDLVDNETIKASPSTESNVPIAPHTKSADNCPLIVLDDSESSVDIRPIEINNSPFKESKRELHTSHNIVHNSDRW-QSSPEKEDRSSNSDEAMLVLSDDENDTNCYKENPSSRRHVDLSHLCAAVNSSSPRKEQGENKGEDYQKSQGLF---LYNSQSCAPANEANSKVLPRRPRPTESAQMPKHDVDFSLVQGSVQDSARAEPLSNSHIQDESHKDGRCRIVLILDSAERIAPNKVQNYSSFVEMLKVRNIPYDVRQLPCGDTLFVARFDDGTEILMDYLIERKTVDDYGASMSDGRISKQSYMLLNSLICNAILILEGDLKDNSYLYDQPRMHSKLAELEVCANVYVKKTKDLQDTVHFYGCILRRLQAKFCGT-SKAQMLNGRHVFSEWLRSMQHAKKSMTLEQVFMLQLCHFPGVGMNKAQTIMSMGYKTPQLLCRAYQQKRTMKEKENMLNPPGSKIGATVSKSVAQVFTLSSYDS 1080          
BLAST of Gcaud2547.t1 vs. uniprot
Match: R7QEB5_CHOCR (To fill in n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QEB5_CHOCR)

HSP 1 Score: 186 bits (472), Expect = 2.270e-44
Identity = 95/265 (35.85%), Postives = 156/265 (58.87%), Query Frame = 0
Query:  911 ECKVILVVDSMERLEQHRSQIISSFPELLRENNIMCDVRRLPCGDALFLAQFNDGTEFVLDYIFERKTISDYGLSMSDGRIARQSYLLLHSNISNPLLIIEGDMKANSQVYNQPRMHSKLAELEVCADVYVKRTSNIRDTAHFYGSILRILQRKCGTMSRSKIIEGRMKFSEWSDRIDRIKRKTTLEELFMLQLLSLEGLGIGRARSISNLGYRTPQSLHQAYETKKNMHEKEALLNSRGSGIGRKISSAVAHLFCSEDYNTNYA 1175
            EC+V+LVVDSMER+ +    I+ +    L    + C+VR+LPCGDA+F+AQ+  G E +LDYI ERKT+ D+  SM DGR  RQ++++  + I   + ++EGD+K ++ + N      + AE+EVC D YVK+T ++ DT  FY S+ + L  +      +  +EGR  +  W++R+  + R  +L +LFMLQL  ++ +G   A  I   G +TP +L++ + + +N  ++E +      GI +K    +A LF + +Y    A
Sbjct:  735 ECRVVLVVDSMERVRKRSRDILDTIKGQLLAQGVDCEVRQLPCGDAMFVAQYPGGIEVILDYIIERKTLEDFHASMRDGRERRQAFMMRQAQIPRRIFLLEGDVKRSALLRNNASFEKRRAEIEVCDDFYVKKTKSLDDTLWFYSSMYKRLCMQFSERPLALAMEGRNLYQNWNERMRGLTRGISLGQLFMLQLCQVKHVGKDTAVGIVKSGCKTPIALYERFRSVQNEADRENVFAGE-VGINKKAVRTLAKLFTASEYEVEAA 998          
BLAST of Gcaud2547.t1 vs. uniprot
Match: A0A182Y981_ANOST (ERCC4 domain-containing protein n=1 Tax=Anopheles stephensi TaxID=30069 RepID=A0A182Y981_ANOST)

HSP 1 Score: 97.1 bits (240), Expect = 3.200e-17
Identity = 92/330 (27.88%), Postives = 148/330 (44.85%), Query Frame = 0
Query:  868 CRSNDQTSAAKQQVIDLESMDLERSQD--PVVASGPSFNNRLCNEECKVILVVDSMERLEQHRSQIISSFPELLRENNIMCDVRRLPCGDALFLAQFNDGTEFVLDYIFERKTISDYGLSMSDGRIARQSYLLLHSNISNPLLIIEGDMKANSQVYNQPRMHSKLAELEVCADVY-VKRTSNIRDTAHFYGSILRILQRKC------GTMSRSKIIEGRMKFSEWSDRIDRIK-----------RKTTLEELFMLQLLSLEGLGIGRARSISNLGYRTPQSLHQAYETKKNMHEKEALLN----SRGSGIGRKISSAVAHLFCSEDYNTN 1173
            CR N +  A + + I+ E+M  +   D  PV A      + +     K IL+VD+ E + + +S +  +  +L  ++++  +VRRL  GD  ++ + +DG EF+L YI ERK I D   S+ DGR   Q + L    + N + +IE     N++    P      A L      + VK T N   T  +   +   L              R    + R  F   S  +  +            R +T++++FM QLL ++ L I +  +I +  Y TPQ L +AYE   +  E++ LLN         IG K+S  +  L  SE YNT+
Sbjct:  138 CRINAEEPAQEVEPIE-EAMPNDSIFDHVPVAAVSLGDGDFVRISHPKAILLVDTCETIGKSKSSLDRTLQQLA-QHSVAHEVRRLTVGDFAWIVKADDGREFLLPYILERKRIDDLASSIKDGRFHEQKFRLKQCGLPNVIYLIEH--LGNNRQVGVPEATLTQAALNTYVQGFTVKYTENHHHTVLYLSVMTNFLNNYLKDKLYLNVTDRPASDDPRDAFRFSSQTVPLLSFDYFYKQSAKTRDSTVQDVFMKQLLQIKLLTIEKVNAIVDK-YPTPQRLFRAYERCPSETERQRLLNLPYGPTNRMIGEKLSKIIYQLMMSERYNTS 462          
BLAST of Gcaud2547.t1 vs. uniprot
Match: A0A2T7DBW2_9POAL (ERCC4 domain-containing protein n=22 Tax=Panicum TaxID=4539 RepID=A0A2T7DBW2_9POAL)

HSP 1 Score: 97.4 bits (241), Expect = 5.180e-17
Identity = 80/302 (26.49%), Postives = 139/302 (46.03%), Query Frame = 0
Query:  888 DLERSQDPVVASGPSFNNRLCNEECKVILVVDSMERLEQHRSQIISSFPELLRENNIMCDVRRLPCGDALFLAQFN-DGTEFVLDYIFERKTISDYGLSMSDGRIARQSYLLLHSNISNPLLIIEGDMKANSQVYNQP----RMHSKLAELEVCADVYVKRTSNIRDTAHFYGSILRILQRKCGTMSRSKIIEGRMKFSEWSDR------IDRIKRK------TTLEELFMLQLLSLEGLGIGRARSISNLGYRTPQSLHQAYETKK-NMHEKEALLNSRGSGIGRKISSAVAHLFCSEDYN 1171
            D+  +  P++A  P  +N    E  +V+ ++D  E+      ++  +   +  + ++  ++R+LP GD +++A+   D TE+VLD+I ERK + D   S++D R   Q   L    +   + ++EGD        N P    R+ +     E+     V+RTS   DT           QR+ G ++RS I    + FS ++         D  KRK      TT+ E+F LQL+ +  +    A ++  L Y TP  L QAY     + H +E +L ++   +    S  +  LFC + +N
Sbjct:  313 DIAFTDKPILAMPPRQSNEKFLEGYEVVFILDDREKFGSRSRKVADN---ICSQIHVPVEIRKLPVGDGIWIARHRKDHTEYVLDFIVERKEVLDLDGSIADSRYRDQKLRLKRCGLRKLIYLVEGDP-------NHPDAPERIKTACFTTEILDGFDVQRTSGFADT-----------QRRYGHLTRSIIKYYDINFSTYAKTSHVCPTYDEFKRKCCDLEKTTVSEIFALQLMQVPQVTEEAALAVIEL-YPTPLFLAQAYSALDGDTHAQEEMLKNKSKMVNAGASRNIFELFCGDGWN 592          
BLAST of Gcaud2547.t1 vs. uniprot
Match: A0A834ZYI0_9POAL (ERCC4 domain-containing protein n=1 Tax=Digitaria exilis TaxID=1010633 RepID=A0A834ZYI0_9POAL)

HSP 1 Score: 96.7 bits (239), Expect = 6.050e-17
Identity = 85/306 (27.78%), Postives = 143/306 (46.73%), Query Frame = 0
Query:  877 AKQQVIDLESM---DLERSQDPVVASGPSFNNRLCNEECKVILVVDSMERLEQHRSQIISSFPELLRENNIMCDVRRLPCGDALFLAQFN-DGTEFVLDYIFERKTISDYGLSMSDGRIARQSYLLLHSNISNPLLIIEGDMKANSQVYNQPRMHSKLAELEVCADVYVKRTSNIRDTAHFYGSILRILQRKCGTMSRSKIIEGRMKFSEWSDRIDRIKRK-----TTLEELFMLQLLSLEGLGIGRARSISNLGYRTPQSLHQAYETKK-NMHEKEALLNSRGSGIGRKISSAVAHLFCSEDYNT 1172
            + Q+V +L+S+   D   + +P++A  P   N    E  +V+ ++D  E+      ++  +    +   ++  +VR LP GDA+++A+   D TE+VLD+I ERK + D   S+ D R   Q   +    +   + ++EGD   N  V  + R  +     E+     V+RTS   DT   Y  + R +  +C   + S + E R     +    D  KRK     TT+ ++F LQL+ +  +    A ++  L Y TP  L QAY     +   ++A+L S+   I    S  V  LFC +  NT
Sbjct:  216 SSQRVFELQSLSAADTAFADEPILAMPPRQPNEKFLEAYEVVFILDDREKFGSRSRKVADNIRSQI---HVPVEVRHLPVGDAIWIARNRKDRTEYVLDFIVERKEVLDLNGSIEDNRYRDQKLRMKRCGLRKMIYLVEGDPN-NPDV--RERTKTACFTTEILDGFDVQRTSGFADTQRRYCHLTRSII-ECYDANVSTLAETRRVCPTY----DEFKRKCELEKTTVSQIFALQLMQVPQVTEEAALAVIRL-YPTPFFLAQAYYALDGDPPAQQAMLESKNKKINAGASRNVFELFCGDGRNT 509          
BLAST of Gcaud2547.t1 vs. uniprot
Match: A0A368RFP0_SETIT (ERCC4 domain-containing protein n=4 Tax=Setaria TaxID=4554 RepID=A0A368RFP0_SETIT)

HSP 1 Score: 95.5 bits (236), Expect = 2.170e-16
Identity = 78/285 (27.37%), Postives = 137/285 (48.07%), Query Frame = 0
Query:  892 SQDPVVASGPSFNNRLCNEECKVILVVDSMERLEQHRSQIISSFPELLREN-NIMCDVRRLPCGDALFLAQFN-DGTEFVLDYIFERKTISDYGLSMSDGRIARQSYLLLHSNISNPLLIIEGDMKANSQVYNQPRMHSKLAELEVCADVYVKRTSNIRDTAHFYGSILR-ILQRKCGTMS-RSKIIEGRMKFSEWSDRIDRIKRKTTLEELFMLQLLSLEGLGIGRARSISNLGYRTPQSLHQAYETKK-NMHEKEALLNSRGSGIGRKISSAVAHLFCSEDYN 1171
            + DP++A  P  +N    E  +V+ ++D+ E+         S   +++R   ++  +VR+LP GD +++A+   D TE+VLD+I ERK ISD+  S+ D R   Q   L    +   + ++EGD  + +      R+ +     E+     V+RTS   DT   YG + R I++      S  +K       + E+  +   +K KTT+ ++F LQL+ +  +    A ++    Y TP  L QAY     +   +EA+L ++   +    S ++  LFC    N
Sbjct:  329 TDDPILAMPPRQSNEKFLEAYEVVFILDNREKFGSR-----SKIADIIRSQIHVPVEVRKLPVGDGIWIARHRKDRTEYVLDFIVERKEISDFDGSIEDNRYRDQKLRLKRCGLRKMIYLVEGDPNSPNAT---KRIKTACFTTEILDGFDVQRTSGYADTQRRYGHLTRSIMEYYDANFSIHAKTSPVCPTYDEFERKCCDLK-KTTVSQIFALQLMQVPQVTEEAALAVIE-HYPTPFLLAQAYYILDGDTPTQEAMLKNKSEVVDAGASRSIFELFCGGGRN 603          
BLAST of Gcaud2547.t1 vs. uniprot
Match: K3XKS1_SETIT (ERCC4 domain-containing protein n=1 Tax=Setaria italica TaxID=4555 RepID=K3XKS1_SETIT)

HSP 1 Score: 91.3 bits (225), Expect = 2.580e-16
Identity = 78/284 (27.46%), Postives = 133/284 (46.83%), Query Frame = 0
Query:  892 SQDPVVASGPSFNNRLCNEECKVILVVDSMERLEQHRSQIISSFPELLRENNIMCDVRRLPCGDALFLAQFN-DGTEFVLDYIFERKTISDYGLSMSDGRIARQSYLLLHSNISNPLLIIEGDMKANSQVYNQPRMHSKLAELEVCADVYVKRTSNIRDTAHFYGSILR-ILQRKCGTMS-RSKIIEGRMKFSEWSDRIDRIKRKTTLEELFMLQLLSLEGLGIGRARSISNLGYRTPQSLHQAYETKK-NMHEKEALLNSRGSGIGRKISSAVAHLFCSEDYN 1171
            + DP++A  P  +N    E  +V+ ++D+ E+           F       N++  VR+LP GD +++A+   D TE+VLD+I ERK ISD+  S+ D R   Q   L    +   + ++EGD  + +      R+ +     E+     V+RTS   DT   YG + R I++      S  +K       + E+  +   +K KTT+ ++F LQL+ +  +    A ++    Y TP  L QAY     +   +EA+L ++   +    S ++  LFC    N
Sbjct:   17 TDDPILAMPPRQSNEKFLEAYEVVFILDNREKF---------GF-------NLVIQVRKLPVGDGIWIARHRKDRTEYVLDFIVERKEISDFDGSIEDNRYRDQKLRLKRCGLRKMIYLVEGDPNSPNAT---KRIKTACFTTEILDGFDVQRTSGYADTQRRYGHLTRSIMEYYDANFSIHAKTSPVCPTYDEFERKCCDLK-KTTVSQIFALQLMQVPQVTEEAALAVIE-HYPTPFLLAQAYYILDGDTPTQEAMLKNKSEVVDAGASRSIFELFCGGGRN 279          
BLAST of Gcaud2547.t1 vs. uniprot
Match: UPI0019392865 (crossover junction endonuclease MUS81-like n=2 Tax=Styela clava TaxID=7725 RepID=UPI0019392865)

HSP 1 Score: 94.4 bits (233), Expect = 2.680e-16
Identity = 73/276 (26.45%), Postives = 128/276 (46.38%), Query Frame = 0
Query:  897 VASGPSFNNRLCNEECKVILVVDSMERLEQHRSQIISSFPELLRENNIMCDVRRLPCGDALFLAQFNDGT-------EFVLDYIFERKTISDYGLSMSDGRIARQSYLLLHSNISNPLLIIEGDMKANSQVYNQPRMHSKLAELEVCADVYVKRTSNIRDTAHFYGSILRILQRK--CGTMSRSKIIEGRMKFSEWSDR----------IDRIKRKTTLEELFMLQLLSLEGLGIGRARSISNLGYRTPQSLHQAYETKKNMHEKEALLNSRGSGI 1153
            + S P F   L   E  ++L VD+ E + + R + +      L + N+  + R L  GD L++AQ            E VL+YI ERK +SD  +S+ DGR   Q   L  S I N + +IE      +Q   +  +   +   ++  ++ VK T N + T  +   + + LQR     T+   +I + +  FS+   +          +   ++K T++E+F+ QL+ + G+   +A +I+ L Y TP  L + Y    +  EKE L++    G+
Sbjct:  190 MTSSPVFT--LSPGEFDIVLCVDTRETMGESRRKEMGVE---LNKQNVCYEQRTLHIGDFLWIAQEKPALCVGRKPKELVLNYIIERKILSDLSMSIKDGRFREQKIRLKQSGIGNIIYLIENMGNIENQSLPEQTLRQAIYNTQIVDNICVKFTKNAKATVRYLDLMTKHLQRSYLTFTLEALEISDSQGDFSQPETKKLTPFNVFNEMGSKRKKLTIKEMFIRQLMQIHGMSYDKASAITAL-YETPNQLVEKYRNLPSEKEKEELISKVKFGL 459          
BLAST of Gcaud2547.t1 vs. uniprot
Match: A0A059LJH4_9CHLO (ERCC4 domain-containing protein (Fragment) n=1 Tax=Helicosporidium sp. ATCC 50920 TaxID=1291522 RepID=A0A059LJH4_9CHLO)

HSP 1 Score: 90.9 bits (224), Expect = 7.340e-16
Identity = 75/276 (27.17%), Postives = 132/276 (47.83%), Query Frame = 0
Query:  895 PVVASGPSFNNRLCNEEC-KVILVVDSMERLEQH----RSQIISSFPELLRENNIMCDVRRLPCGDALFLAQ-------------FNDGTEFVLDYIFERKTISDYGLSMSD-GRIARQSYLLLHSNISNPLLIIEGDMKANSQVYNQPRMHSKLAELEVCADVYVKRT--SNIRDTAHFYGSILRILQRKCGTMSRSKIIEGRM--KFSEWSDRIDRIKRKT-TLEELFMLQLLSLEGLGIGRARSISNLGYRTPQSLHQAYETKKNMHEKEALL 1146
            P +  G SF      E C +V+ +VD+ E         R + +    + LR   +  + R LP GD +++A+              + GTEFVLD++ ERK+++D   S+    R A Q   L      N L ++EGD+   S   +Q  + + +AE E      V RT  +  +DT      + + ++ +C     S     R    ++E+ DR+   +R+  TL++++   L ++ G+G   AR+++   Y TP++LH AY    ++ +K+ALL
Sbjct:   16 PPLLPGSSF------EACYRVVALVDAREHFGGGSGGGRGEALRGHMDALRARGLRVEERTLPVGDVVWVARATQAWSESGGGGSVDPGTEFVLDWVLERKSVTDLLASIRGRARFATQKKALAQCGRPNVLFLLEGDVDTLSNASDQKAIKTAIAECEFVHGFQVLRTRGTGYQDTFRRLQILTQAVEAQCRARPSSGATSPRACPTWAEFVDRVTAARREVVTLQDMWTCMLGTVSGVGAEAARAVA-AAYPTPRALHLAYAACGSVEQKKALL 284          
BLAST of Gcaud2547.t1 vs. uniprot
Match: A0A1Y2FI93_PROLT (Putative DNA repair protein Mus81 n=1 Tax=Protomyces lactucae-debilis TaxID=2754530 RepID=A0A1Y2FI93_PROLT)

HSP 1 Score: 93.6 bits (231), Expect = 8.170e-16
Identity = 81/305 (26.56%), Postives = 143/305 (46.89%), Query Frame = 0
Query:  875 SAAKQQVIDLESMDLERSQDPVVASGPSFNNRLCNEECKVILVVDSMERLEQHRSQIISSFPELLRENNIMCDVRRLPCGDALFLAQFNDGTEFVLDYIFERKTISDYGLSMSDGRIARQSYLLLHSNISNPLLIIEGDMKANSQVYNQPRMHSKLAELEVCADVYVKRTSNIRDTAHFYGSILRILQ------------------RKCGTMSR--SKIIEGRMKFSEWSDRIDRIKRKTT---LEELFMLQLLSLEGLGIGRARSISNLGYRTPQSLHQAYETKKNMHEKEALLNSRGSGIGRK 1156
            + + +QV+D  + D+ +S  PV+    SF         KV LV+D+ E + Q     I +    L ++NI    R L  GDAL++A+ NDG EFVLD I ERK + D   S+ DGR   Q + L        + IIE    AN +++ +  M + ++ ++V    +VKR  ++  T ++  ++ + L+                  R    +S   +K   G   F  + D  D + +K++   + ++++  L+ + G+   +A  I    + T   L QAY    +  E+E ++  + +G GRK
Sbjct:  260 AGSTRQVVDAAAFDITQSFTPVIIPAGSF---------KVQLVIDNREVITQKDRDFIEAS---LYKSNIELIQRSLKVGDALWIAKCNDGREFVLDQIVERKRMDDLAASIKDGRWQEQRFRLAKCGAQQVIYIIEESHAANVELFAEA-MTTAISTMQVADGHFVKRVPSLDGTINYLATMTKKLKSIYEGQTLKALPDHMVDSRAFVQLSEHLNKTQPGTRYFLSY-DAFDGLNQKSSNMRVGDIWIRMLMCIRGVSAEKAVEIQE-HFPTLSLLLQAYAKCSSQQEREKMMAEQCAGFGRK 549          
The following BLAST results are available for this feature:
BLAST of Gcaud2547.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J6T6_9FLOR8.670e-17835.06Crossover junction endonuclease MUS81 n=1 Tax=Grac... [more]
R7QEB5_CHOCR2.270e-4435.85To fill in n=1 Tax=Chondrus crispus TaxID=2769 Rep... [more]
A0A182Y981_ANOST3.200e-1727.88ERCC4 domain-containing protein n=1 Tax=Anopheles ... [more]
A0A2T7DBW2_9POAL5.180e-1726.49ERCC4 domain-containing protein n=22 Tax=Panicum T... [more]
A0A834ZYI0_9POAL6.050e-1727.78ERCC4 domain-containing protein n=1 Tax=Digitaria ... [more]
A0A368RFP0_SETIT2.170e-1627.37ERCC4 domain-containing protein n=4 Tax=Setaria Ta... [more]
K3XKS1_SETIT2.580e-1627.46ERCC4 domain-containing protein n=1 Tax=Setaria it... [more]
UPI00193928652.680e-1626.45crossover junction endonuclease MUS81-like n=2 Tax... [more]
A0A059LJH4_9CHLO7.340e-1627.17ERCC4 domain-containing protein (Fragment) n=1 Tax... [more]
A0A1Y2FI93_PROLT8.170e-1626.56Putative DNA repair protein Mus81 n=1 Tax=Protomyc... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 562..585
NoneNo IPR availableGENE3D3.40.50.10130coord: 907..1060
e-value: 1.0E-22
score: 82.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 292..416
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 753..777
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 627..643
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 838..852
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 805..823
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 377..396
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 458..480
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 400..416
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 481..499
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 456..519
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 658..672
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 578..676
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 82..179
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 602..626
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 753..864
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 131..167
NoneNo IPR availablePANTHERPTHR13451:SF0CROSSOVER JUNCTION ENDONUCLEASE MUS81coord: 9..1166
IPR006166ERCC4 domainSMARTSM00891ERCC4_2coord: 915..1014
e-value: 1.1E-11
score: 54.8
IPR006166ERCC4 domainPFAMPF02732ERCC4coord: 927..1054
e-value: 1.5E-13
score: 51.2
IPR027421DNA polymerase lambda lyase domain superfamilyGENE3D1.10.150.110coord: 9..74
e-value: 3.5E-6
score: 29.2
IPR027421DNA polymerase lambda lyase domain superfamilySUPERFAMILY47802DNA polymerase beta, N-terminal domain-likecoord: 7..73
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 173..284
e-value: 1.4E-15
score: 58.9
IPR042530EME1/EME2, C-terminal domainGENE3D1.10.150.670coord: 1094..1171
e-value: 2.8E-9
score: 39.3
IPR033309Crossover junction endonuclease Mus81PANTHERPTHR13451CLASS II CROSSOVER JUNCTION ENDONUCLEASE MUS81coord: 9..1166
IPR011335Restriction endonuclease type II-likeSUPERFAMILY52980Restriction endonuclease-likecoord: 912..1059

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_146_length_43567_cov_5.009154contigNODE_146_length_43567_cov_5.009154:30406..33933 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2547.t1Gcaud2547.t1Gracilaria caudata M_176_S67 malemRNANODE_146_length_43567_cov_5.009154 30406..33933 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2547.t1 ID=Gcaud2547.t1|Name=Gcaud2547.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=1176bp
MAPRISRFCINQGVVDALQTEFENATGEWIRKALRTAIKNVRSCRRVILT
REDALEINGVGDYIASVIETYLNECPPFPDGIPEHILQAQREAQPSTSNN
RSVREGRERGQGRGRGRGRGRGRGRGQGRGRDQTGVQSSSLMDLQQDSNS
ICQSRSVSTPTQNQTRSREGTPRKRARKEYVPRVGTATASLLIAMLKALD
DEDLSELKKEDLAKRAERYTTEKILGVRSGDKNSWYDGWSGMNPQLISKG
LVTKRGKPLVFKLTDKGVQTARICFEQYEDLRKRRQLKYEDEGALETSAM
PPSVPQSSEVRGNDDDEICIVPVSSSPRLSNKSRYNGGSKRGPRHVQPQR
GKGRSAREAFSASEDTPIEDTMSEEQCDDFQLAKRLQEEFDGELGHSHVT
QHAPPSTTSTDFREPQNLSRFVNFGRPEAARSLRDADMDRGIRLARKYAA
GEEFGTTSIARRRNSVPQNEVPGARANQPSETKSLREDDKRHESNQSDIH
QADKSSLVSSRNGSARRRKLAGAPLQRVCRVFEELEKEGESRQDLIMIAG
EMFDQGKLPKTENALTKALRETMRAVQEAENEERNPPEPMDLVLTTLGGS
GSHPKDDHDSSGDEVNRIRKTFEKRAQNPSARGNPSRSNPFSSEEDGIID
LIDGDDISNNDDVNHVHSVDSEEEGLNQIPNDVQVPRTPENYVKSDLDYS
GALEEETRVIDLVNESQSLPFVPRNTSRSSHQKSRDQEEVIVIDGNYTSS
DAKRESLVERSGKRSVIGEDDRAPRSFSGKKQIIPSTEEPIYIESDDDEN
GSRNSIHDQGFQRISSTPPVTPVTGELCSRERNVRNATDFRQSSSMTTPR
IDNPQRRRPHVQDEVNICRSNDQTSAAKQQVIDLESMDLERSQDPVVASG
PSFNNRLCNEECKVILVVDSMERLEQHRSQIISSFPELLRENNIMCDVRR
LPCGDALFLAQFNDGTEFVLDYIFERKTISDYGLSMSDGRIARQSYLLLH
SNISNPLLIIEGDMKANSQVYNQPRMHSKLAELEVCADVYVKRTSNIRDT
AHFYGSILRILQRKCGTMSRSKIIEGRMKFSEWSDRIDRIKRKTTLEELF
MLQLLSLEGLGIGRARSISNLGYRTPQSLHQAYETKKNMHEKEALLNSRG
SGIGRKISSAVAHLFCSEDYNTNYA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006166ERCC4_domain
IPR027421DNA_pol_lamdba_lyase_dom_sf
IPR036388WH-like_DNA-bd_sf
IPR042530EME1/EME2_C
IPR033309Mus81
IPR011335Restrct_endonuc-II-like