Gcaud8275.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8275.t1
Unique NameGcaud8275.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length247
Homology
The following BLAST results are available for this feature:
BLAST of Gcaud8275.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 21..32
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 33..37
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 38..246
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..37
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..20
NoneNo IPR availableTMHMMTMhelixcoord: 13..32

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1463_length_10453_cov_4.528759contigNODE_1463_length_10453_cov_4.528759:4872..5612 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8275.t1Gcaud8275.t1Gracilaria caudata M_176_S67 malemRNANODE_1463_length_10453_cov_4.528759 4872..5612 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8275.t1 ID=Gcaud8275.t1|Name=Gcaud8275.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=247bp
MMFFDIGKDVMMYFRVFSSPFFLSIVFGFISLRSCEADEAKPSPLPPLIR
WKQTAGIKMTADGPDQPYSVVRKRGTAFVGVAYREIIKATLSETNACTLS
FDKRCSIAHSSPGVVGEAHFRFEDPSRRLKGHTTQVLLACRCVDNRCGQA
IVMEPRKAVAANGSESYVCLYPKVNEKWKDCHTEVLSLEERDRDAKPKAP
RKRAYVVSLGQGGYWESTGARPYEANITEQELSSLKTTTFDTILAE*
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