Gcaud2639.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2639.t1
Unique NameGcaud2639.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length251
Homology
BLAST of Gcaud2639.t1 vs. uniprot
Match: A0A2V3IGM3_9FLOR (Sonic hedgehog protein A n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGM3_9FLOR)

HSP 1 Score: 218 bits (555), Expect = 1.400e-66
Identity = 108/184 (58.70%), Postives = 135/184 (73.37%), Query Frame = 0
Query:   66 LCFPANSIVNTLNRGDIAMHQLQIGDEVQVAS-NSEKRYSQVFTFSHRVQTSLFPFKSLVTEKGTLTLTAGHYVYTRNAIIAAKSVRTGDELQLADTSFAKVLDVQNVWRKGLYNPHTMEGELVVDGFRVSSYTTSVEANVANALLTPLRAVYRLFGIDFTAGAVERPLLRWVLPFLPSGGSTV 248
            +CFPA+++V TL+RG I + QLQ+GD+V VA   +   YS VFTFSHR+  S FPFKS+ TE+GTL ++AGHYVYTR+ + AAK++R  DELQLAD SF  V  V NVW KGLYNPHT  GEL+VDGFRVSSYTTSV  NVA ALL P+RA + L  +D TAG  E  +  W+  ++P G +TV
Sbjct:  142 VCFPASAVVTTLDRGAIRISQLQLGDKVLVAKVGTNSTYSTVFTFSHRIDHSWFPFKSIETEEGTLVVSAGHYVYTRDTLRAAKTLRPNDELQLADGSFTPVQRVHNVWEKGLYNPHTELGELLVDGFRVSSYTTSVRTNVATALLAPVRAAFALLRVDITAGLFEHSVHSWITRWVPKGANTV 325          
BLAST of Gcaud2639.t1 vs. uniprot
Match: A0A2V3IFE3_9FLOR (Protein hedgehog n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFE3_9FLOR)

HSP 1 Score: 155 bits (391), Expect = 5.020e-43
Identity = 76/184 (41.30%), Postives = 114/184 (61.96%), Query Frame = 0
Query:   67 CFPANSIVNTLNRGDIAMHQLQIGDEVQVASNSEKRYSQVFTFSHRVQTSLFPFKSLVTEKGTLTLTAGHYVYTRNAIIAAKSVRTGDELQLADTSFAKVLDVQNVWRKGLYNPHTMEGELVVDGFRVSSYTTSVEANVANALLTPLRAVYRLFGIDFTAGAVERPLLRWVLPFLPSGGSTVLL 250
            CFP N+ V   N G + M  L+ GD V  A+ +   YS+VF FSHR++TS+ PF+ + T    +T + GHY+YT+  ++AA +++ GD L      +  V+  ++VW +GLYNPHT+ GE VV+GFRVS YTT+V  ++A  LL+PLRA +R+ G D + G +      W+ P    G S++ L
Sbjct:   60 CFPGNAAVKVENIGWVPMRNLRTGDRVLQANGA---YSEVFGFSHRLRTSIHPFRRICTVTKCMTASHGHYIYTKQKLVAAGAIKAGDFLATGVDEYEAVIGSEDVWEQGLYNPHTLTGEFVVEGFRVSCYTTAVRPDLAKTLLSPLRAAFRVIGADISGGLLASVRQPWMFPPGMLGQSSLAL 240          
BLAST of Gcaud2639.t1 vs. uniprot
Match: R7Q619_CHOCR (HintN domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q619_CHOCR)

HSP 1 Score: 136 bits (342), Expect = 1.190e-35
Identity = 72/175 (41.14%), Postives = 107/175 (61.14%), Query Frame = 0
Query:   66 LCFPANSIVNTLNRGDIAMHQLQIGDEVQVASNSEKRYSQVFTFSHRVQTSLFPFKSLVTEKG-TLTLTAGHYVYTRNAIIAAKSVRTGDELQLADTSFAKVLDVQNVWRKGLYNPHTMEGELVVDGFRVSSYTTSVEANVANALLTPLRAVYRLFGIDFTAGAVERPLLRWVLP 239
            +CFPAN++V   N     M Q+Q+GD V+V  N    +S VF F+H+     + F +L T+ G TL+LT GHY+Y    + AAK+VR+GD + LAD + + V  V     +GLYNP T+ G+++V+G   ++YTT+VE ++A+ALL PLRAVY   G   +A       L  ++P
Sbjct:   68 VCFPANALVELENGATKMMSQVQLGDRVRVGPND---FSDVFMFTHKTAAIKYSFVTLATQSGHTLSLTKGHYLYVNGVVAAAKTVRSGDFITLADGTTSSVTQVGTEIARGLYNPQTVHGDIIVNGLLATTYTTTVERSMAHALLAPLRAVYSSIGWSMSALDAGADRLAGIVP 239          
BLAST of Gcaud2639.t1 vs. uniprot
Match: UPI001E1DDBBD (warthog protein 6-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DDBBD)

HSP 1 Score: 125 bits (315), Expect = 5.130e-31
Identity = 63/160 (39.38%), Postives = 99/160 (61.88%), Query Frame = 0
Query:   67 CFPANSIVNTLNRGDIAMHQLQIGDEVQVASNSEKRYSQVFTFSHRVQTSLFPFKSLVTEKG-TLTLTAGHYVYTRNAIIAAKSVRTGDELQLADTSFAKVLDVQNVWRKGLYNPHTMEGELVVDGFRVSSYTTSVEANVANALLTPLRAVYRLFGIDFT 225
            CFP +++V   +     M +++IGD V+V       +S+VF F+H+  T ++ F  + T  G +++LT GHY++    + AA  V  GD LQL      +V DV  V  KG+YNP T+ G++VV G RVS+YTT+VE  +A+A L  +R++YR+FG+ F+
Sbjct:  132 CFPGSAMVELESGARQRMDKMKIGDRVKVG---RAEFSEVFMFTHKTHTGIYDFVKITTSSGHSVSLTGGHYIHVNGGLAAASVVAVGDMLQLGTGEATEVTDVTCVQSKGIYNPQTLHGDIVVGGIRVSTYTTAVEPRLAHAGLGAIRSMYRIFGLTFS 288          
BLAST of Gcaud2639.t1 vs. uniprot
Match: A0A1X6PD14_PORUM (Hint domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PD14_PORUM)

HSP 1 Score: 126 bits (316), Expect = 1.150e-29
Identity = 68/152 (44.74%), Postives = 93/152 (61.18%), Query Frame = 0
Query:   67 CFPANSIVNTLNRGDIAMHQLQIGDEVQVASNSEKRYSQVFTFSHRVQTSLFPFKSLVTEKGTLTLTAGHYVYTRNAIIAAKSVRTGDELQLADTSFAKVLDVQNVWRKGLYNPHTMEGELVVDGFRVSSYTTSVEANVANALLTPLRAVYR 218
            CFPA++ +   +   + +  L  G  V+V   +   +S+VF FSH+V     PF  L T  G LTL+AGHYVY    + AA +V  GD L+ AD +   V  +  V   GLY PHT+ G++VVDGFRVS+YTT+VE  +A+ALL P+RA YR
Sbjct:  385 CFPASAALTLADGTAVGVDILATGHTVRVGKAA---HSEVFLFSHKVAGGDHPFLRLTTAAGALTLSAGHYVYANGGLKAAAAVAVGDTLETADGATVPVSAITAVRASGLYAPHTLHGDVVVDGFRVSTYTTAVEPRLAHALLAPVRAAYR 533          
BLAST of Gcaud2639.t1 vs. uniprot
Match: A0A2V3IFE6_9FLOR (Sonic hedgehog protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFE6_9FLOR)

HSP 1 Score: 123 bits (309), Expect = 2.520e-29
Identity = 68/167 (40.72%), Postives = 101/167 (60.48%), Query Frame = 0
Query:   67 CFPANSIVNTLNRGDIAMHQLQIGDEVQVASNSEKRYSQVFTFSHRVQTSLFPFKSLVTEKGTLTLTAGHYVYTRNAIIAAKSVRTGDELQLADTSFAKVLDVQNVWRKGLYNPHTMEGELVVDGFRVSSYTTSVEANVANALLTPLRAVYRLFGID---FTAGAVE 230
            CFPA++ V   +     M Q+ IGD V+V  +    +S+VF F+HR+Q     F  + T+   ++LT GHY++    + AAK+V+ GD ++LA    A V  V+ V   GLYNP T+ G++VV+G R S+YTT+V+   A+ LLTP RA+Y+ FG+    F  GAV 
Sbjct:  241 CFPADTTVELEDGSVKEMAQVNIGDRVRVGRSM---FSEVFMFTHRLQDGENYFVKIETDSSGISLTKGHYLFVNGVLAAAKTVQVGDLVELASGETATVRAVKKVKGTGLYNPQTISGDIVVNGIRASTYTTTVDPAFAHRLLTPFRALYQAFGVATSAFERGAVN 404          
BLAST of Gcaud2639.t1 vs. uniprot
Match: A0A7S1T873_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1T873_9RHOD)

HSP 1 Score: 121 bits (303), Expect = 1.290e-28
Identity = 73/162 (45.06%), Postives = 96/162 (59.26%), Query Frame = 0
Query:   67 CFPANSIVNTLNRGDIAMHQLQIGDEVQVASNSEKRYSQVFTFSHRVQTSLFPFKSLVTEKGTLTLTAGHYVYTRNAII-AAKSVRTGDELQLADTSFAKVLDVQNVWRKGLYNPHTMEGELVVDGFRVSSYTTSVEANVANALLTPLRAVYRLFGIDFTAG 227
            CFPA+S V TL+ G   M +L++GD V  +  S   YS VF F HR   +   F  L TE G LTL+  HYVY  +  +  A SV+ GD L  A     +V  ++N+  +GL+NPHT  G LVVDGF+VS YT +V  +VA+ LL PLRA++   G  F AG
Sbjct:  216 CFPASSTVITLS-GLRKMEELELGDSVMTSDGS---YSPVFFFGHREPNTWHNFIELETENGKLTLSPSHYVYLLDGTMRTAASVQIGDTLVSASGKAREVTGLKNIRERGLFNPHTSSGHLVVDGFKVSCYTETVNPHVAHVLLAPLRALH---GFGFIAG 370          
BLAST of Gcaud2639.t1 vs. uniprot
Match: A0A2V3IY57_9FLOR (Warthog protein 8 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IY57_9FLOR)

HSP 1 Score: 120 bits (300), Expect = 1.640e-28
Identity = 64/152 (42.11%), Postives = 95/152 (62.50%), Query Frame = 0
Query:   66 LCFPANSIVNTLNRGDIAMHQLQIGDEVQVASNSEKRYSQVFTFSHRVQTSLFPFKSLVTEKGTLTLTAGHYVYTRNAIIAAKSVRTGDELQLADTSFAKVLDVQNVWRKGLYNPHTMEGELVVDGFRVSSYTTSVEANVANALLTPLRAVY 217
            +CFPA++ V   +     + QL IGD VQV   S  ++S VF ++H    + + F  L T   ++TLT  HY+Y  + I  AKSV  G +L+L D S  +V+  + VW+ GLYNP T++G++VVDG   ++YTT+V+ N A+ALL PLRA +
Sbjct:  183 VCFPADASVRLQDGSVRTVSQLSIGDHVQV---SHAKFSPVFAWTHADAHTKYRFVQLSTPSTSITLTPSHYIYADDVIRPAKSVTLGMKLRLHDGSQQQVIGKKYVWKTGLYNPQTVDGDIVVDGIVATTYTTAVQINAAHALLAPLRAAF 331          
BLAST of Gcaud2639.t1 vs. uniprot
Match: A0A2V3J2J0_9FLOR (Temptin n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2J0_9FLOR)

HSP 1 Score: 120 bits (300), Expect = 3.210e-28
Identity = 65/155 (41.94%), Postives = 99/155 (63.87%), Query Frame = 0
Query:   65 DLCFPANSIVNTLNRGDIAMHQLQIGDEVQVASNSEKRYSQVFTFSHRVQTSLFPFKSLVTEKG-TLTLTAGHYVYTRNAIIAAKSVRTGDELQLADTSFAKVLDVQNVWRKGLYNPHTMEGELVVDGFRVSSYTTSVEANVANALLTPLRAVYR 218
            ++CFPA++ V   +     M QLQIGD V V +     YS +F F+H+     +PF  + T+K  +LTLT+GH++Y  +A + A +VR GD +QL D S + V  V      GLYNP T+ G+L+V+G RV++YT+++   +A++LLTPLRA Y+
Sbjct:  212 NVCFPAHAQVRLEDGSVRRMDQLQIGDRVHVGNGI---YSPIFMFTHQHARIRYPFVIIQTDKQHSLTLTSGHFMYANDASVRASAVRVGDYVQLEDGSKSLVTAVSKHISNGLYNPQTLHGDLIVNGVRVTTYTSAIHLTLAHSLLTPLRAFYQ 363          
BLAST of Gcaud2639.t1 vs. uniprot
Match: A0A2V3IGP9_9FLOR (Warthog protein 6 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGP9_9FLOR)

HSP 1 Score: 119 bits (299), Expect = 1.400e-27
Identity = 72/183 (39.34%), Postives = 105/183 (57.38%), Query Frame = 0
Query:   67 CFPANSIVNTLNRGDIAMHQLQIGDEVQVASNSEKRYSQVFTFSHRVQTSLFPFKSLVTEKG-TLTLTAGHYVYTRNAIIAAKSVRTGDELQLADTSFAKVLDVQNVWRKGLYNPHTMEGELVVDGFRVSSYTTSVEANVANALLTPLRAVYRLFGIDFTAGAVERPLLRWVLPFLPSGGSTV 248
            CFPA++ V   +     M  +++GD V+VAS     +S VF F+H++    + F  L    G +L LT GHY+Y    + AA+SV  GD ++  D     V  V  V  +GLYNP T+ G +VV+G R S+YTT+VE   A++LL PLRAV+RL G+  T+  ++    + +   LPSGG  V
Sbjct:  306 CFPAHATVELEDGSFKTMDSIELGDRVKVASGE---FSPVFMFTHKMAGISYSFVRLTASSGHSLELTKGHYLYVNGDLAAAESVHVGDSIE-TDAGVVSVSAVARVVSRGLYNPQTVNGNIVVNGVRASTYTTAVEIKTAHSLLLPLRAVFRLAGM--TSAMLDNGSDK-LASMLPSGGIIV 481          
The following BLAST results are available for this feature:
BLAST of Gcaud2639.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IGM3_9FLOR1.400e-6658.70Sonic hedgehog protein A n=1 Tax=Gracilariopsis ch... [more]
A0A2V3IFE3_9FLOR5.020e-4341.30Protein hedgehog n=1 Tax=Gracilariopsis chorda Tax... [more]
R7Q619_CHOCR1.190e-3541.14HintN domain-containing protein n=1 Tax=Chondrus c... [more]
UPI001E1DDBBD5.130e-3139.38warthog protein 6-like n=1 Tax=Mercenaria mercenar... [more]
A0A1X6PD14_PORUM1.150e-2944.74Hint domain-containing protein n=1 Tax=Porphyra um... [more]
A0A2V3IFE6_9FLOR2.520e-2940.72Sonic hedgehog protein n=1 Tax=Gracilariopsis chor... [more]
A0A7S1T873_9RHOD1.290e-2845.06Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A2V3IY57_9FLOR1.640e-2842.11Warthog protein 8 n=1 Tax=Gracilariopsis chorda Ta... [more]
A0A2V3J2J0_9FLOR3.210e-2841.94Temptin n=1 Tax=Gracilariopsis chorda TaxID=448386... [more]
A0A2V3IGP9_9FLOR1.400e-2739.34Warthog protein 6 n=1 Tax=Gracilariopsis chorda Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003587Hint domain N-terminalSMARTSM00306hint_7coord: 65..160
e-value: 7.7E-6
score: 35.4
NoneNo IPR availableGENE3D2.170.16.10Hedgehog/Intein (Hint) domaincoord: 67..198
e-value: 1.0E-29
score: 105.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 18..56
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 35..56
NoneNo IPR availablePANTHERPTHR11889:SF31PROTEIN HEDGEHOGcoord: 66..218
NoneNo IPR availablePANTHERPTHR11889HEDGEHOGcoord: 66..218
NoneNo IPR availableCDDcd00081Hintcoord: 67..195
e-value: 4.67979E-11
score: 56.8938
IPR001767Hedgehog protein, Hint domainPFAMPF01079Hintcoord: 66..219
e-value: 1.5E-24
score: 86.7
IPR036844Hint domain superfamilySUPERFAMILY51294Hedgehog/intein (Hint) domaincoord: 67..197

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_145_length_43658_cov_4.983588contigNODE_145_length_43658_cov_4.983588:7660..8652 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2639.t1Gcaud2639.t1Gracilaria caudata M_176_S67 malemRNANODE_145_length_43658_cov_4.983588 7660..8652 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2639.t1 ID=Gcaud2639.t1|Name=Gcaud2639.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=251bp
LPAFSKLSDFSYAPVRLRMTMTPRPSRRPGGFDDDDEEEFFGEEEEEEEE
DESSFFDIDDDGDDDLCFPANSIVNTLNRGDIAMHQLQIGDEVQVASNSE
KRYSQVFTFSHRVQTSLFPFKSLVTEKGTLTLTAGHYVYTRNAIIAAKSV
RTGDELQLADTSFAKVLDVQNVWRKGLYNPHTMEGELVVDGFRVSSYTTS
VEANVANALLTPLRAVYRLFGIDFTAGAVERPLLRWVLPFLPSGGSTVLL
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003587Hint_dom_N
IPR001767Hedgehog_Hint
IPR036844Hint_dom_sf