Gcaud9167.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9167.t1
Unique NameGcaud9167.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length104
Homology
BLAST of Gcaud9167.t1 vs. uniprot
Match: A0A2V3IZH2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZH2_9FLOR)

HSP 1 Score: 182 bits (463), Expect = 1.210e-57
Identity = 84/103 (81.55%), Postives = 95/103 (92.23%), Query Frame = 0
Query:    1 MQARLRTGKILRPDVEDDVLRKPVSESKFRHPSPGSQQPPLVPQGPYENVFNIEYHSRDVRRRHTREQINAAQAAATAGLPPTPGTPAHSKFLGMAGDFDRQQ 103
            ++ RL TGKILRPDV+DDVLR+PVSESKFR+PSPGSQQPP+VPQGPYE+VFNIEYHSRD RRRHTREQ++ + AAATAGLPPT GTPA S+FLGMAGDFDR Q
Sbjct:   34 LRERLSTGKILRPDVQDDVLRQPVSESKFRYPSPGSQQPPVVPQGPYEHVFNIEYHSRDARRRHTREQVHPSDAAATAGLPPTAGTPAQSRFLGMAGDFDRHQ 136          
BLAST of Gcaud9167.t1 vs. uniprot
Match: A0A1X6NNY7_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NNY7_PORUM)

HSP 1 Score: 99.4 bits (246), Expect = 1.350e-24
Identity = 50/113 (44.25%), Postives = 70/113 (61.95%), Query Frame = 0
Query:    1 MQARLRTGKILRPDVEDDVLRKPVSESKFRHPSPGSQQPPLVPQGPYENVFNIEYHSRDVRRRHTREQ-----------INAAQAAATAGLPPTPGTPAHSKFLGMAGDFDRQ 102
            ++ RL TGK+LRPDV DDVLR P+ +SK+R P+PG Q+P +VP GPY+NVF+I Y  R        +            ++A +A + A LPPTPG    +  LG AG+FD++
Sbjct:   27 LKERLATGKLLRPDVADDVLRLPMEQSKYRTPAPGDQRPTIVPTGPYKNVFDIAYFKRGPGAGLASDASAPASPAASPLLSAEEAKSAADLPPTPGRVPVAIHLGYAGEFDKK 139          
BLAST of Gcaud9167.t1 vs. uniprot
Match: A0A7J7IGP3_9RHOD (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IGP3_9RHOD)

HSP 1 Score: 99.0 bits (245), Expect = 2.510e-24
Identity = 51/110 (46.36%), Postives = 70/110 (63.64%), Query Frame = 0
Query:    4 RLRTGKILRPDVEDDVLRKPVSESKFRHPSPGSQQPPLVPQGPYENVFNIEYHSRDVRRRHTREQI-----------NAAQAAATAGLPPTPGTPAHSKFLGMAGDFDRQ 102
            RLR G+I R D+E +  R+P  ES+FR+PSPGSQ+P L+PQGP + VF+I YHSRD RRR  RE             ++++A+ T+ LPPTPG     + LG   +F R+
Sbjct:   41 RLRRGRIFRADLEPENWREPWRESRFRYPSPGSQKPALIPQGPQQRVFDITYHSRDERRRVIRETCLLRVAPSEPTPSSSEASNTSSLPPTPGVFLRWQNLGSLKEFTRE 150          
BLAST of Gcaud9167.t1 vs. uniprot
Match: M2Y413_GALSU (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y413_GALSU)

HSP 1 Score: 73.9 bits (180), Expect = 1.120e-14
Identity = 38/84 (45.24%), Postives = 50/84 (59.52%), Query Frame = 0
Query:    4 RLRTGKILRPDVEDDVLRKPVSESKFRHPSPGSQQPPLVPQGPYENVFNIEYHSRDVRRRHTREQINAAQA--AATAGLPPTPG 85
            R+RTGKI RPD+ D V R    ++   H        PLVPQGPY+ VF+I+Y+SRD RR+  REQ+   +    +   LPP PG
Sbjct:   31 RVRTGKIFRPDLPDYVQRFSEVKNPRFHTHLQENAKPLVPQGPYKQVFDIQYYSRDTRRKIQREQVEPVKVFDPSAESLPPVPG 114          
The following BLAST results are available for this feature:
BLAST of Gcaud9167.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IZH2_9FLOR1.210e-5781.55Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A1X6NNY7_PORUM1.350e-2444.25Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7J7IGP3_9RHOD2.510e-2446.36NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
M2Y413_GALSU1.120e-1445.24NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..43
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 9..28
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 68..103

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1421_length_10791_cov_3.905047contigNODE_1421_length_10791_cov_3.905047:7801..8204 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9167.t1Gcaud9167.t1Gracilaria caudata M_176_S67 malemRNANODE_1421_length_10791_cov_3.905047 7801..8204 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9167.t1 ID=Gcaud9167.t1|Name=Gcaud9167.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=104bp
MQARLRTGKILRPDVEDDVLRKPVSESKFRHPSPGSQQPPLVPQGPYENV
FNIEYHSRDVRRRHTREQINAAQAAATAGLPPTPGTPAHSKFLGMAGDFD
RQQ*
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