Gcaud9168.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9168.t1
Unique NameGcaud9168.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length380
Homology
BLAST of Gcaud9168.t1 vs. uniprot
Match: A0A2V3IZB8_9FLOR (Myb-like protein D n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZB8_9FLOR)

HSP 1 Score: 440 bits (1131), Expect = 4.960e-149
Identity = 256/378 (67.72%), Postives = 291/378 (76.98%), Query Frame = 0
Query:    8 SDDGSQQERNHQRPTHAASAMQLLPPPGEVSRNVHNAPPPVHSSPKHSSHRKRSISQLVPSM-LARDISSLTHKPDDHASSVAQPQLR----ISPLRGHHRRADKYQRITAPVEGSTDMLAAAAAGSAMHNADNHSPSKSKRRSPANDSRTELLEENRVLRIELEHIKNKLRSADSRIKKMHKTIINHESLLHKYRSKLVDVFESGGDAPLSLRTPDDREHKRDERSKMHAESVSNSQ-EEQWSAYSPSASFEPEQSEDIRRMHERDVMSRSERGGALAKHRRTRAPAWTALEEEIFMKAYHKHGCQWKLYQDSLPGRSRRQIQSHGSYLIRQGKLTKKNSRPWQRRKPRHDGAPASTVNDAQVETETQEAAHRSEEE 379
            SD+GSQQERNHQRP H  S++ +LPPPGEVSR   N P    +SPKH+  RKR  + L+PSM  A DISSLT KPDDHASSVA PQ+R    ISP     RR DK+QR    VEGSTDML      SA++N ++ SP KSKRRS   +SRTELLEENR LRIELE  K+KLRSA+S I+KM + +   ESLL KYRS+LV++FESGGD  LSLR  D+R HKR+ERSK+  ES+SNS+ EEQWSAYSPS SF PEQSED RR  +RDVMSRSE  GA  KHRRTRAPAWT  EEEIFM+AYHKHGCQWKLYQ+SLPGRSRRQIQSHGSYLIRQGKL KKNSRPWQRRK R +GAP+STV DA VET+     HRS+EE
Sbjct:  145 SDNGSQQERNHQRPAHPPSSLPVLPPPGEVSRTARNTPAAADTSPKHNP-RKRRAAHLLPSMPAAPDISSLTQKPDDHASSVALPQVRDPFRISPPPTDDRRPDKFQRPNQHVEGSTDMLPTP---SALNNVEHQSPPKSKRRSTGKESRTELLEENRTLRIELEQTKSKLRSAESHIRKMRRDMTKKESLLLKYRSQLVELFESGGDPRLSLRMRDERLHKREERSKVDGESMSNSEDEEQWSAYSPSGSFGPEQSEDFRRGPDRDVMSRSE--GA-HKHRRTRAPAWTPREEEIFMEAYHKHGCQWKLYQNSLPGRSRRQIQSHGSYLIRQGKLAKKNSRPWQRRKARPEGAPSSTVKDADVETQ---GGHRSDEE 512          
BLAST of Gcaud9168.t1 vs. uniprot
Match: M1UPK2_CYAM1 (Uncharacterized protein n=2 Tax=cellular organisms TaxID=131567 RepID=M1UPK2_CYAM1)

HSP 1 Score: 71.2 bits (173), Expect = 7.330e-10
Identity = 31/70 (44.29%), Postives = 47/70 (67.14%), Query Frame = 0
Query:  281 KHRRTRAPAWTALEEEIFMKAYHKHGCQWKLYQDSLPGRSRRQIQSHGSYLIRQGKLTKKNSRPWQRRKP 350
            KH+  R   W+  E+ +F +AY   GC+W   +  LP ++R+Q+QSHG+YLI++G + K NSR W RR+P
Sbjct:  390 KHKMRRHSVWSEEEDCMFRRAYATFGCKWNRIKSFLPNKTRQQVQSHGTYLIKRGVIRKFNSRSWTRRQP 459          
BLAST of Gcaud9168.t1 vs. uniprot
Match: UPI000644AF75 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644AF75)

HSP 1 Score: 68.9 bits (167), Expect = 5.090e-9
Identity = 65/214 (30.37%), Postives = 93/214 (43.46%), Query Frame = 0
Query:  165 ELEHIKNKLRSADSRIKKMHKTIINHESLLHKYRSKLVDVFESGGDAPLS--------LRTPD----------------------DREHKRDERSK--------MHAESVSNSQEEQWSAYSPSASFEPEQSEDIRRMHERDVMSRSERGGALAKHRRT---RAPAWTALEEEIFMKAYHKHGCQWKLYQDSLPGRSRRQIQSHGSYLIRQGKL 337
            E E I+   +  + +++ M   I   + LL KYR  L+ +FE  G+A  S         R+P                       DRE +  ++S         M  +  + SQ +  S       F  E   +++R    D  S  E  GA  K R+T   R   W+  ++E F KAY+KHG  WK     LPG++R Q+QSHG YLIR GKL
Sbjct:  279 ESEKIEALTKHYNQKLEAMQNVIAKKDVLLTKYRKTLLKLFEDKGNAEESEGDNRSAISRSPSXXXXXXXXXXXXESRYSDSDMSDREQRPRKKSLPGAIMSMGMSGDQKAISQNQLLSQQQQQFIFRDESVNELKRKGGDDTKSGGE--GAPIKKRKTGSRRNTLWSVEDDETFAKAYNKHGKSWKTIHSLLPGKTREQVQSHGQYLIRIGKL 490          
BLAST of Gcaud9168.t1 vs. uniprot
Match: UPI000644B472 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644B472)

HSP 1 Score: 68.2 bits (165), Expect = 9.090e-9
Identity = 34/68 (50.00%), Postives = 44/68 (64.71%), Query Frame = 0
Query:  273 SERGGALAKHRRT---RAPAWTALEEEIFMKAYHKHGCQWKLYQDSLPGRSRRQIQSHGSYLIRQGKL 337
            SE+G      +RT   R   W+A ++EIF +AY++HG  WK     LPG+SR Q+QSHG YLIR GKL
Sbjct:  415 SEKGDESPAKKRTGSRRNTLWSAEDDEIFARAYNRHGKSWKTIHSMLPGKSREQVQSHGQYLIRIGKL 482          
BLAST of Gcaud9168.t1 vs. uniprot
Match: M2Y6B4_GALSU (Myb domain-containing protein isoform 1 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y6B4_GALSU)

HSP 1 Score: 65.5 bits (158), Expect = 5.180e-8
Identity = 29/54 (53.70%), Postives = 40/54 (74.07%), Query Frame = 0
Query:  286 RAPAWTALEEEIFMKAYHKHGCQWKLYQDSLPGRSRRQIQSHGSYLIRQGKLTK 339
            R+  WT  E+ +FMKA+ ++G +WK  Q  LP +SR+QIQSHG+YL+R GKL K
Sbjct:  348 RSNLWTPEEDALFMKAFKQYGTKWKQIQKVLPNKSRQQIQSHGAYLLRLGKLNK 401          
BLAST of Gcaud9168.t1 vs. uniprot
Match: D3AZX5_POLPP (Myb domain-containing protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3AZX5_POLPP)

HSP 1 Score: 65.1 bits (157), Expect = 9.030e-8
Identity = 38/88 (43.18%), Postives = 53/88 (60.23%), Query Frame = 0
Query:  253 FEPEQSEDIRRMHERDVMSRSERGGALAKHRRT---RAPAWTALEEEIFMKAYHKHGCQWKLYQDSLPGRSRRQIQSHGSYLIRQGKL 337
            F  E   +++R +E D+  +    G L K RRT   +   W+A ++E F KAY+K+G  WK     LPG++R Q+QSHG YLIR GKL
Sbjct:  426 FTHENVNELKRKNE-DIKQQPTPDGGL-KRRRTGSRKNTLWSAEDDETFAKAYNKYGKSWKTIHSLLPGKTREQVQSHGQYLIRIGKL 511          
BLAST of Gcaud9168.t1 vs. uniprot
Match: A0A151ZDC2_9MYCE (Myb domain-containing protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZDC2_9MYCE)

HSP 1 Score: 62.8 bits (151), Expect = 4.960e-7
Identity = 32/74 (43.24%), Postives = 47/74 (63.51%), Query Frame = 0
Query:  290 WTALEEEIFMKAYHKHGCQWKLYQDSLPGRSRRQIQSHGSYLIRQGKLTKKNSRPWQRRKPRHDGAPASTVNDA 363
            WTA ++  F  AYHK+G  WK     LP ++R Q+QSHG YLIR GKL   + +  +R + + DG P+S+ ++A
Sbjct:  493 WTAEDDAKFAAAYHKYGKSWKTIHSHLPDKTREQVQSHGQYLIRIGKLEDLH-KDGRRTRHQKDGNPSSSNSNA 565          
BLAST of Gcaud9168.t1 vs. uniprot
Match: F0ZWN5_DICPU (Uncharacterized protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZWN5_DICPU)

HSP 1 Score: 61.2 bits (147), Expect = 1.560e-6
Identity = 30/70 (42.86%), Postives = 43/70 (61.43%), Query Frame = 0
Query:  290 WTALEEEIFMKAYHKHGCQWKLYQDSLPGRSRRQIQSHGSYLIRQGKLTKKNSRPWQRRKPRHDGAPAST 359
            WTA ++E F +AY+K+G  WK     LP ++R Q+QSHG YLIR GKL   +    + R  + DG P ++
Sbjct:  469 WTAEDDEKFAEAYNKYGKSWKTIHSHLPDKTREQVQSHGQYLIRIGKLQDLHKDGRRTRHIKPDGLPLTS 538          
BLAST of Gcaud9168.t1 vs. uniprot
Match: F4Q1K9_CAVFA (Myb domain-containing protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4Q1K9_CAVFA)

HSP 1 Score: 61.2 bits (147), Expect = 1.600e-6
Identity = 26/48 (54.17%), Postives = 34/48 (70.83%), Query Frame = 0
Query:  290 WTALEEEIFMKAYHKHGCQWKLYQDSLPGRSRRQIQSHGSYLIRQGKL 337
            W+A ++E F +AY+K G  WK     LPG++R Q+QSHG YLIR GKL
Sbjct:  431 WSAEDDETFARAYNKFGKSWKTIHSHLPGKTREQVQSHGQYLIRIGKL 478          
BLAST of Gcaud9168.t1 vs. uniprot
Match: L8H7F2_ACACA (Myblike DNA-binding domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H7F2_ACACA)

HSP 1 Score: 61.2 bits (147), Expect = 1.880e-6
Identity = 25/52 (48.08%), Postives = 35/52 (67.31%), Query Frame = 0
Query:  286 RAPAWTALEEEIFMKAYHKHGCQWKLYQDSLPGRSRRQIQSHGSYLIRQGKL 337
            R+  WT  ++  F++AY  HG  WK   +SLP ++R Q+QSHG YLIR GK+
Sbjct:  809 RSTLWTPEDDAKFLRAYRMHGKSWKAIHESLPNKTREQVQSHGQYLIRTGKI 860          
The following BLAST results are available for this feature:
BLAST of Gcaud9168.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A2V3IZB8_9FLOR4.960e-14967.72Myb-like protein D n=1 Tax=Gracilariopsis chorda T... [more]
M1UPK2_CYAM17.330e-1044.29Uncharacterized protein n=2 Tax=cellular organisms... [more]
UPI000644AF755.090e-930.37hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
UPI000644B4729.090e-950.00hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
M2Y6B4_GALSU5.180e-853.70Myb domain-containing protein isoform 1 n=1 Tax=Ga... [more]
D3AZX5_POLPP9.030e-843.18Myb domain-containing protein n=1 Tax=Polysphondyl... [more]
A0A151ZDC2_9MYCE4.960e-743.24Myb domain-containing protein n=1 Tax=Tieghemostel... [more]
F0ZWN5_DICPU1.560e-642.86Uncharacterized protein n=1 Tax=Dictyostelium purp... [more]
F4Q1K9_CAVFA1.600e-654.17Myb domain-containing protein n=1 Tax=Cavenderia f... [more]
L8H7F2_ACACA1.880e-648.08Myblike DNA-binding domain containing protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 152..186
NoneNo IPR availableGENE3D1.10.10.60coord: 290..353
e-value: 1.1E-7
score: 34.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 215..235
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..92
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 256..281
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 213..283
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 320..336
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 236..255
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 320..379
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 137..154
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 120..154
IPR001005SANT/Myb domainSMARTSM00717santcoord: 286..334
e-value: 1.7E-4
score: 30.9
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 289..327
e-value: 1.68633E-5
score: 39.8662
IPR017930Myb domainPFAMPF00249Myb_DNA-bindingcoord: 289..327
e-value: 5.2E-7
score: 29.8
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 282..336
score: 9.783592
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 286..328

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1421_length_10791_cov_3.905047contigNODE_1421_length_10791_cov_3.905047:8332..9471 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9168.t1Gcaud9168.t1Gracilaria caudata M_176_S67 malemRNANODE_1421_length_10791_cov_3.905047 8332..9471 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9168.t1 ID=Gcaud9168.t1|Name=Gcaud9168.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=380bp
MRATGANSDDGSQQERNHQRPTHAASAMQLLPPPGEVSRNVHNAPPPVHS
SPKHSSHRKRSISQLVPSMLARDISSLTHKPDDHASSVAQPQLRISPLRG
HHRRADKYQRITAPVEGSTDMLAAAAAGSAMHNADNHSPSKSKRRSPAND
SRTELLEENRVLRIELEHIKNKLRSADSRIKKMHKTIINHESLLHKYRSK
LVDVFESGGDAPLSLRTPDDREHKRDERSKMHAESVSNSQEEQWSAYSPS
ASFEPEQSEDIRRMHERDVMSRSERGGALAKHRRTRAPAWTALEEEIFMK
AYHKHGCQWKLYQDSLPGRSRRQIQSHGSYLIRQGKLTKKNSRPWQRRKP
RHDGAPASTVNDAQVETETQEAAHRSEEE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR017930Myb_dom
IPR009057Homeobox-like_sf