Gcaud9156.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9156.t1
Unique NameGcaud9156.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length431
Homology
BLAST of Gcaud9156.t1 vs. uniprot
Match: A0A2V3IGT8_9FLOR (VWFA domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGT8_9FLOR)

HSP 1 Score: 491 bits (1265), Expect = 1.340e-169
Identity = 250/436 (57.34%), Postives = 316/436 (72.48%), Query Frame = 0
Query:    2 MSRTIVLLLSVFGCSLAVAPPCRRDVVFPYISCETDCAWYSHSTVTDCVQKKQFGCGLQTCSANGFQCILDSSITPACPNNEIPVKEVTLKPFRPVEFNLAFNLSEYMKDYIFLIDACNSTRPALDAVKEELIRFVRNVSADYNVGVAIYGSESSFDARGFSVLQTVTSNGEDVVRALQHIPVLPDGPRSSIQALSILGGSRTVEGAIESLGFRSRNRAVVLIGDTPGREVPCDAPYFTDLRRSWGFRIQK----IVVNIASPGLDAALPALHCDHYNIPEAQNPIREGQGS--SIAGEYIVHPPVTFDKLFQMYDEHRRYIPPRGYLPGWGRRVWITQNTTYRQFGYFQMPYPPPLSDGCNERVRMSIPSPWPELLKIPSEKDGKVRLEVEPLACRNGSFTCEVVVKDSRSRQFLGASSSR-VDGHVHIIKVKAC 430
            M   ++LL+++   S A++  CRR+VVFP++SC   C W+S+ ++  C +K QFGC LQ C+ NGFQC +D SI+P CPNNEIPV+EVTL P RPVEFNLAFNLSEY +D IFL DA  STR +LDA+K +LIRF+RNVS+ Y+VG+ +YGSE SF A G+SVLQTVT + E+ V+AL +IP+LPDGPR+S+ AL+ L G RTVEG I + GFRS+ R  +LIGDTPGREVPCDAP F+D+R     R       +  +I SPGL+AA+ A  C+++ IPEA NPI+  Q S  SI G  ++  PVTFD L+  Y + R Y PPRGY P WGR V +TQNTT R FGYFQMP P P SDGCNERV +S P  WP  L+ P+++ G ++L + P ACRNGSFTCEVV+KD R R  +G  SSR  DGHVHI+KV AC
Sbjct:    1 MKLFLILLVALLCNSYALSSRCRRNVVFPFVSCGNTCGWHSYQSIWKCCRKAQFGCRLQWCTRNGFQCAVDPSISPVCPNNEIPVEEVTLIPHRPVEFNLAFNLSEYTRDVIFLFDASTSTRSSLDALKNDLIRFIRNVSSTYSVGIGLYGSEQSFGAAGYSVLQTVTPHSEEAVQALHNIPMLPDGPRTSMLALATLIGLRTVEGGIPNFGFRSQERIFLLIGDTPGREVPCDAPSFSDIRHDIINRRGPSNIILTASIGSPGLNAAISAPPCNYHTIPEALNPIQAEQASDISIRGGQVM-TPVTFDTLYTTYHQIRSY-PPRGYFPNWGRAVTVTQNTTSRGFGYFQMPVPIPQSDGCNERVILSTPVSWPVPLQFPTKEVGTIQLALAPWACRNGSFTCEVVIKDVR-RNIIGTPSSRNFDGHVHIVKVNAC 433          
BLAST of Gcaud9156.t1 vs. uniprot
Match: A0A2V3IME3_9FLOR (VWFA domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IME3_9FLOR)

HSP 1 Score: 224 bits (571), Expect = 2.860e-65
Identity = 151/423 (35.70%), Postives = 216/423 (51.06%), Query Frame = 0
Query:   21 PPCRRDVVFPYISCETDCAWYSHSTVTDCVQKKQFGCGLQTCSANGFQCILDSSITP--ACPNNEIPVKEVTLKPFRPVEFNLAFNLSEYMKDYIFLIDACNSTRPALDAVKEELIRFVRNVSADYNVGVAIYGSESSFDARGFSVLQTVTSNGEDVVRALQHIPVLPDGPRSSIQALSILGGSRTVEGAIESLGFRSRNRAVVLIGDTPGREVPCDAPYFTDLRRSWGFRIQKIVVNIASPGLDAALPA----LHCDHYNIPEAQNPIREGQGSSIA----GEYIVHPPVTFDKLFQMYDEHRRYIPPRGYLPGWGRRVWITQNTTYRQFGYFQMPYPPPL---SDGCNERVRMSIPSPWPELLKIPSEKDGKVRLEVEPLACRNGSFTCEVVVKDSRSRQFLGASSSRVDGHVHIIKVKAC 430
            P CRR  VFP+++CE+ C  Y  +  + C QK QFGC  + CS++ ++C L+ ++     CPN E+PVK + L  F  V+FNLA NL  Y  D + LID  +STRP L A+K EL  FVR ++    VGVA+YGSE S+D  G SVL  VT   +  + AL+ IP   DG R++I AL      +T+  ++  L  R   R +VLIGD PGRE  C   Y  D+       I    V++ S GL++ALPA    ++  +Y+     +PI  GQ   I     GE +    VT   L    D  RR  P   Y    G  + ++  +    F  ++ PY PP+   S+GC  +V +   S  P  +  P+E    V + +    C +G FTCE+ V + R      +S S    H  +IK+  C
Sbjct:   26 PQCRRKNVFPFVTCESKCFSYYPNFGSGCSQKAQFGCEYKKCSSSSYRCALNPAVEKDNPCPNGEVPVKSINLTSF--VDFNLAINLRGYSTDVVLLIDTSSSTRPHLKAIKNELSSFVRQLNGSAKVGVAVYGSEESYDESGLSVLSAVTDYVDPALEALESIPETVDGTRTTITAL------KTLSSSVAGLNLRGNKRIIVLIGDRPGREPDCRNGYNRDMVLPSSTMIS---VSLGSDGLNSALPAPSACMNGSYYD----PSPIAVGQARDIVNRTNGEVV--EIVTAASLLWAVDTVRRR-PVYWYNRPPGSNIRVSSAS----FPLYRGPYTPPVQRYSNGCGNKVYLRT-SGLPAFISAPAEVTASVHVALPKGVCIHGPFTCEIRVVEIRRGGEYPSSWSIPFEHFEVIKIHGC 425          
BLAST of Gcaud9156.t1 vs. uniprot
Match: A0A2V3IEV7_9FLOR (VWFA domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEV7_9FLOR)

HSP 1 Score: 160 bits (406), Expect = 5.160e-42
Identity = 130/358 (36.31%), Postives = 178/358 (49.72%), Query Frame = 0
Query:   86 VKEVTLKPFRPVEFNLAFNLSEYMKDYIFLIDACNSTRPALDAVKEELIRFVRNVSADYNVGVAIYGSESSFDARGFSVLQTVTSNGEDVVRALQHIPVLPDGPRSSIQAL-SILGGSRTVEGAIESLGFRSRNRAVVLIGDTPGREVPCDAPYFTDLRRSWGFRIQKIVVNIASPGLDAALPALHCDHYNIPEAQNPIREGQGSSIA----GEYIVHPPVTFDKLFQMYDEHRRYIPPRGYLPGWGRRVWITQNTTYRQFGYFQMPYPPPLS--------DGCNERVRMSIPSPWPELLKIPSEKDGKVRLEVEPLACRNGSFTCEVVVKDSRSRQFLGASSSRVDGHVHIIKVKAC 430
            V  VTL+   P++ +L  N+    +D + L+DA  STR  L+ VKE+L  FVR +    NV VA YG ES     G+SV    TS+      AL +IP++ DGPR+SI A+ SI+   +  +G I  LG  +  R +VL+GDTPGRE  C     +D       R + +VVN+ASPGL+AALPA     Y    A   I EGQG+ +A    GE I    VT  KL +   + R  +     L G G  + +   T      Y    Y  P S         GC++RV +   S  P+    P +  GK+ L +    C+ G F CEV VK+ R  +F  +  S    H H+I VKAC
Sbjct:    2 VNNVTLRHHFPIDISLDINVPGDTQDIVMLVDASQSTRAKLNNVKEQLKSFVRTLGDVGNVSVAFYGGESDMGETGYSVALKATSDVNRAAEALDNIPIVADGPRTSITAMWSIM---QHQDGTIP-LGLFANRRIIVLVGDTPGREPECRHGIKSDRMSFSSQRTRVMVVNLASPGLNAALPAPAACGYITSAA---IPEGQGTRLADTSEGELISQ--VTSSKLRESILKLR--MNAANGLHGKGSHISVLSKT------YTYTEYTCPSSFCARTITTKGCDDRVIIR-KSNIPDFAHGPVQMTGKISLSLPAGICQRGPFYCEVEVKE-RLERFSYSHWSLPQRHTHLIGVKAC 340          
BLAST of Gcaud9156.t1 vs. uniprot
Match: A0A2V3IGI2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGI2_9FLOR)

HSP 1 Score: 159 bits (402), Expect = 1.110e-40
Identity = 128/420 (30.48%), Postives = 195/420 (46.43%), Query Frame = 0
Query:    9 LLSVFGCSLAVAPPCRRDVVFPYISCETDCAW-YSHSTVTDCVQKKQFGCGLQTCSANGFQCILDSSITP--ACPNNEIPVKEVTLKPFRPVEFNLAFNLSEYMKDYIFLIDACNSTRPALDAVKEELIRFVRNVS-ADYNVGVAIYGSESSFDARGFSVLQTVTSNGEDVVRAL---QHIPVLPDGPRSSIQALSILGGSRTVEGAIESLGFRSRNRAVVLIGDTPGREVPCDAPYFTDLR---RSWGFRIQKIVVNIASPGLDAALPA-LHCDHYN-IPEAQNPIREGQGSSIA----GEYIVHPPVTFDKLFQMYDEHRRYIPPRGYLPGWGRRVWITQNTTYRQFGYFQMPYPPPLSDGCNERVRMSIPSPWPELLKIPSEKDGKVRLEVEPLACRNGSFTCEVVVKDSRSRQFLG 412
            LL + G    ++  CR+D  FP+I+    C   ++   V+DC+   Q+G     C    F C L   I    +CPN E+PV  V +   RP   +L  N+     D I L+DA +STR  + A+K +++ F+R +     N+ +++ G+E SFD RG SVLQ  T+N  + V++L   + +P +PDGPR+S++ L        +     ++GFRS  + VVL+GDT GRE  C    F       R  G +   + V+I  PGL+A LP    C  +    EA   +   Q S+IA    G ++       D L Q      R  P     P  G  + + Q      F  F+ P+P      C+ RV+ +        L  P E   ++ + +    C +G F C V V   R+ QF G
Sbjct:    9 LLIIAGFFRLISAQCRQDFFFPHITSPFGCTGNFTGFQVSDCLVASQWGYEFSPCGEESFACSLKREIAANNSCPNAELPVSTVRVNLNRPTFVSLGINVPRPTLDVILLLDAVSSTRERIIALKPQIVSFIRQLEDVAENIHISVSGTEESFDQRGTSVLQRTTNNFAEAVQSLDEFERLPPIPDGPRASLRFL--------LPSITNTVGFRSEQQIVVLVGDTSGREPTCVFDRFDRTSFPSRFSGGQFSVVAVSIGDPGLNAPLPTQAPCTRFTPFVEA---VTANQASTIANLTQGAFV--EGFDADTLLQTVMNVSRNAPGNFGQPT-GFDISVPQP-----FSNFRRPFP----SVCDGRVQFNSTMGNRFFLAGPLETTVQLSISLANSGCMDGPFQCPVTVSAFRNNQFGG 405          
The following BLAST results are available for this feature:
BLAST of Gcaud9156.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IGT8_9FLOR1.340e-16957.34VWFA domain-containing protein n=1 Tax=Gracilariop... [more]
A0A2V3IME3_9FLOR2.860e-6535.70VWFA domain-containing protein n=1 Tax=Gracilariop... [more]
A0A2V3IEV7_9FLOR5.160e-4236.31VWFA domain-containing protein n=1 Tax=Gracilariop... [more]
A0A2V3IGI2_9FLOR1.110e-4030.48Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..25
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..430
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..15
score: 5.0
IPR002035von Willebrand factor, type APROSITEPS50234VWFAcoord: 111..259
score: 9.00252
IPR036465von Willebrand factor A-like domain superfamilySUPERFAMILY53300vWA-likecoord: 91..226

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1389_length_11009_cov_6.612566contigNODE_1389_length_11009_cov_6.612566:4203..5495 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9156.t1Gcaud9156.t1Gracilaria caudata M_176_S67 malemRNANODE_1389_length_11009_cov_6.612566 4203..5495 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9156.t1 ID=Gcaud9156.t1|Name=Gcaud9156.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=431bp
MMSRTIVLLLSVFGCSLAVAPPCRRDVVFPYISCETDCAWYSHSTVTDCV
QKKQFGCGLQTCSANGFQCILDSSITPACPNNEIPVKEVTLKPFRPVEFN
LAFNLSEYMKDYIFLIDACNSTRPALDAVKEELIRFVRNVSADYNVGVAI
YGSESSFDARGFSVLQTVTSNGEDVVRALQHIPVLPDGPRSSIQALSILG
GSRTVEGAIESLGFRSRNRAVVLIGDTPGREVPCDAPYFTDLRRSWGFRI
QKIVVNIASPGLDAALPALHCDHYNIPEAQNPIREGQGSSIAGEYIVHPP
VTFDKLFQMYDEHRRYIPPRGYLPGWGRRVWITQNTTYRQFGYFQMPYPP
PLSDGCNERVRMSIPSPWPELLKIPSEKDGKVRLEVEPLACRNGSFTCEV
VVKDSRSRQFLGASSSRVDGHVHIIKVKAC*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002035VWF_A
IPR036465vWFA_dom_sf