Gcaud1214.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1214.t1
Unique NameGcaud1214.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length381
Homology
The following BLAST results are available for this feature:
BLAST of Gcaud1214.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 53..380
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 32..52
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..31
NoneNo IPR availableTMHMMTMhelixcoord: 30..52

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1358_length_11186_cov_4.670302contigNODE_1358_length_11186_cov_4.670302:7645..8787 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1214.t1Gcaud1214.t1Gracilaria caudata M_176_S67 malemRNANODE_1358_length_11186_cov_4.670302 7645..8787 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1214.t1 ID=Gcaud1214.t1|Name=Gcaud1214.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=381bp
MDATGEYHSTVTPETLFGITASRARSVRTLPMVKLIFLLAVAVISLAIVG
QVCDLSSLRWHSRSWRSITEKQLFFIANRPDAALESSIWKMQNNAEYRRI
STVPTRLNRARSPSWVLRGPNVDPSPGAPLIYDSWVFTRHCDGGYTCFVH
LYMVQIADETEVVVGYQIKSLLSNLNVPQTTRARIAAMSEAQVNYIAHEL
VTQVGEGLEQPVCGVDIEFVKAAIKETAAEVLENCDFTNKIEACYPRKSV
LRFPSAPLEKTYMLPTWQCSRKRYCRAVLDVHSINNCVSSRAGYKIFSVD
DEVRSVDEGTKGRIDSTDREKACQWANTLINEVHEDLGDLGCDLDVEAVC
DGMLAGAKTVISCTQTDQDSCLSLTDASCA*
back to top