Gcaud9986.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9986.t1
Unique NameGcaud9986.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length83
Homology
BLAST of Gcaud9986.t1 vs. uniprot
Match: R7Q390_CHOCR (40S ribosomal protein S21 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q390_CHOCR)

HSP 1 Score: 145 bits (367), Expect = 4.140e-44
Identity = 65/82 (79.27%), Postives = 77/82 (93.90%), Query Frame = 0
Query:    1 MQNDKGEVVDLYIPRKCSASNRLITAKDHASVQINIARVDENGVITGEHDTVAICGYVRRKGLSDDAFYRIAKEKGYYQSTK 82
            MQN+KG+VVDLYIPRKCSASNRLITAKDHASVQIN+ RVDENGV+TGE DT+A+CG+VRRKGLSDDAFYR+ ++KG++  TK
Sbjct:    1 MQNEKGDVVDLYIPRKCSASNRLITAKDHASVQINVGRVDENGVLTGEFDTIALCGFVRRKGLSDDAFYRLVRDKGFFDETK 82          
BLAST of Gcaud9986.t1 vs. uniprot
Match: A0A5J4Z5Q6_PORPP (40S ribosomal protein S21 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z5Q6_PORPP)

HSP 1 Score: 119 bits (298), Expect = 2.280e-33
Identity = 52/76 (68.42%), Postives = 67/76 (88.16%), Query Frame = 0
Query:    1 MQNDKGEVVDLYIPRKCSASNRLITAKDHASVQINIARVDENGVITGEHDTVAICGYVRRKGLSDDAFYRIAKEKG 76
            MQNDK E+VDLYIPRKCSA+NR++TAKDH+SVQIN+  VDE+G  TGE++T+A+CG +R KGL DD+ YR+AK+KG
Sbjct:    1 MQNDKKEIVDLYIPRKCSATNRILTAKDHSSVQINVGLVDEDGRYTGEYETIALCGMIRGKGLGDDSIYRLAKQKG 76          
BLAST of Gcaud9986.t1 vs. uniprot
Match: A0A0S6XI99_BLOB1 (Uncharacterized protein n=1 Tax=Fungal sp. (strain No.11243) TaxID=1603295 RepID=A0A0S6XI99_BLOB1)

HSP 1 Score: 116 bits (290), Expect = 1.530e-31
Identity = 53/81 (65.43%), Postives = 68/81 (83.95%), Query Frame = 0
Query:    1 MQNDKGEVVDLYIPRKCSASNRLITAKDHASVQINIARVDENGVITGEHDTVAICGYVRRKGLSDDAFYRIAKEKGYYQST 81
            M+N++GE+VDLY+PRKCSA+NR+I AKDHASVQI+IA+VDENG  TGE+ T A+CG+VR  G SDDAF R+A+  GY +S 
Sbjct:    1 MENERGELVDLYVPRKCSATNRIIKAKDHASVQISIAKVDENGRYTGENQTYALCGFVRAMGESDDAFNRLAQRDGYLKSV 81          
BLAST of Gcaud9986.t1 vs. uniprot
Match: A0A0L0RYP8_ALLM3 (40S ribosomal protein S21 n=2 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0RYP8_ALLM3)

HSP 1 Score: 113 bits (283), Expect = 3.020e-31
Identity = 54/81 (66.67%), Postives = 66/81 (81.48%), Query Frame = 0
Query:    1 MQNDKGEVVDLYIPRKCSASNRLITAKDHASVQINIARVDENGVITGEHDTVAICGYVRRKGLSDDAFYRIAKEKGYYQST 81
            MQNDKG++VDLYIPRKCSA+ RLITAKDH+SVQINIA VDENGV+TG+  T A  G VRR G SDD+  R+A++ GY ++ 
Sbjct:    1 MQNDKGDIVDLYIPRKCSATGRLITAKDHSSVQINIADVDENGVMTGDFHTFAFSGAVRRAGESDDSLNRLAQQSGYLKNV 81          
BLAST of Gcaud9986.t1 vs. uniprot
Match: A0A1X6P5C6_PORUM (40S ribosomal protein S21 n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P5C6_PORUM)

HSP 1 Score: 113 bits (283), Expect = 3.020e-31
Identity = 51/75 (68.00%), Postives = 63/75 (84.00%), Query Frame = 0
Query:    1 MQNDKGEVVDLYIPRKCSASNRLITAKDHASVQINIARVDENGVITGEHDTVAICGYVRRKGLSDDAFYRIAKEK 75
            MQNDK EVVDLYIPRKCSA+NRLITAKDHA+VQ+N+ +VD+ G +TGE +T A+CG++R KGL DD   R+ KEK
Sbjct:    1 MQNDKKEVVDLYIPRKCSATNRLITAKDHAAVQLNVGKVDDQGRLTGEVETFALCGFIRTKGLGDDCLNRLVKEK 75          
BLAST of Gcaud9986.t1 vs. uniprot
Match: G1XE75_ARTOA (40S ribosomal protein S21 n=3 Tax=Orbiliaceae TaxID=47021 RepID=G1XE75_ARTOA)

HSP 1 Score: 112 bits (279), Expect = 1.300e-30
Identity = 49/76 (64.47%), Postives = 66/76 (86.84%), Query Frame = 0
Query:    1 MQNDKGEVVDLYIPRKCSASNRLITAKDHASVQINIARVDENGVITGEHDTVAICGYVRRKGLSDDAFYRIAKEKG 76
            M+ND+G++VDLY+PRKCSA+NR+I AKDHASVQI++A+VDENG  TGEH T A+CG+VR +G +DD+F R+A+  G
Sbjct:    1 MENDQGQLVDLYVPRKCSATNRIIKAKDHASVQISVAKVDENGRATGEHITYALCGFVRSRGEADDSFNRLAQRDG 76          
BLAST of Gcaud9986.t1 vs. uniprot
Match: A0A6A6HH30_9PEZI (40S ribosomal protein S21 n=1 Tax=Viridothelium virens TaxID=1048519 RepID=A0A6A6HH30_9PEZI)

HSP 1 Score: 111 bits (278), Expect = 1.750e-30
Identity = 50/81 (61.73%), Postives = 65/81 (80.25%), Query Frame = 0
Query:    1 MQNDKGEVVDLYIPRKCSASNRLITAKDHASVQINIARVDENGVITGEHDTVAICGYVRRKGLSDDAFYRIAKEKGYYQST 81
            MQN+KG+VVDLY+PRKCSA+NR+I AKDHASVQI++ +VDENG  TGE+ T A+CG+VR  G SDD+  R+A+  GY +  
Sbjct:    1 MQNEKGDVVDLYVPRKCSATNRIIKAKDHASVQISVGKVDENGRYTGENQTYALCGFVRAMGESDDSINRLAQRDGYLKGV 81          
BLAST of Gcaud9986.t1 vs. uniprot
Match: UPI0018AE8EF8 (40S ribosomal protein S21-like n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI0018AE8EF8)

HSP 1 Score: 111 bits (277), Expect = 2.210e-30
Identity = 51/75 (68.00%), Postives = 65/75 (86.67%), Query Frame = 0
Query:    1 MQNDKGEVVDLYIPRKCSASNRLITAKDHASVQINIARVDENGVITGEHDTVAICGYVRRKGLSDDAFYRIAKEK 75
            MQN++G+++DLYIPRKCSA+NRLITAKDHASVQINI  VDENGV TG+H TVA+CG++R +G +D A  RI ++K
Sbjct:    1 MQNEEGKMMDLYIPRKCSATNRLITAKDHASVQINIGHVDENGVYTGQHTTVALCGFIRAQGDADSALDRIWQKK 75          
BLAST of Gcaud9986.t1 vs. uniprot
Match: R1GFB2_BOTPV (40S ribosomal protein S21 n=11 Tax=leotiomyceta TaxID=716546 RepID=R1GFB2_BOTPV)

HSP 1 Score: 111 bits (277), Expect = 2.480e-30
Identity = 50/81 (61.73%), Postives = 67/81 (82.72%), Query Frame = 0
Query:    1 MQNDKGEVVDLYIPRKCSASNRLITAKDHASVQINIARVDENGVITGEHDTVAICGYVRRKGLSDDAFYRIAKEKGYYQST 81
            M+N++GE+VDLY+PRKCSA+NR+I AKDHASVQI+IA+VDENG  TGE+ T A+CG+VR  G SDD+  R+A+  G+ +S 
Sbjct:    1 MENERGELVDLYVPRKCSATNRIIKAKDHASVQISIAKVDENGRYTGENQTYALCGFVRAMGESDDSINRLAQRDGFLKSV 81          
BLAST of Gcaud9986.t1 vs. uniprot
Match: A0A4S3JDZ0_9EURO (40S ribosomal protein S21 n=10 Tax=Eurotiales TaxID=5042 RepID=A0A4S3JDZ0_9EURO)

HSP 1 Score: 111 bits (277), Expect = 2.630e-30
Identity = 48/81 (59.26%), Postives = 66/81 (81.48%), Query Frame = 0
Query:    1 MQNDKGEVVDLYIPRKCSASNRLITAKDHASVQINIARVDENGVITGEHDTVAICGYVRRKGLSDDAFYRIAKEKGYYQST 81
            M+N+KGE+VDLY+PRKCSA+NR+I A DHASVQI++ +VDENG  TGE+ T A+CG++R +G SDD+  R+A+  GY +S 
Sbjct:    1 MENEKGEIVDLYVPRKCSATNRIIKANDHASVQISVGQVDENGRYTGENQTYALCGFIRARGESDDSLNRLAQRDGYLKSV 81          
The following BLAST results are available for this feature:
BLAST of Gcaud9986.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R7Q390_CHOCR4.140e-4479.2740S ribosomal protein S21 n=1 Tax=Chondrus crispus... [more]
A0A5J4Z5Q6_PORPP2.280e-3368.4240S ribosomal protein S21 n=1 Tax=Porphyridium pur... [more]
A0A0S6XI99_BLOB11.530e-3165.43Uncharacterized protein n=1 Tax=Fungal sp. (strain... [more]
A0A0L0RYP8_ALLM33.020e-3166.6740S ribosomal protein S21 n=2 Tax=Allomyces macrog... [more]
A0A1X6P5C6_PORUM3.020e-3168.0040S ribosomal protein S21 n=1 Tax=Porphyra umbilic... [more]
G1XE75_ARTOA1.300e-3064.4740S ribosomal protein S21 n=3 Tax=Orbiliaceae TaxI... [more]
A0A6A6HH30_9PEZI1.750e-3061.7340S ribosomal protein S21 n=1 Tax=Viridothelium vi... [more]
UPI0018AE8EF82.210e-3068.0040S ribosomal protein S21-like n=1 Tax=Dioscorea c... [more]
R1GFB2_BOTPV2.480e-3061.7340S ribosomal protein S21 n=11 Tax=leotiomyceta Ta... [more]
A0A4S3JDZ0_9EURO2.630e-3059.2640S ribosomal protein S21 n=10 Tax=Eurotiales TaxI... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038579Ribosomal protein S21e superfamilyGENE3D3.30.1230.20coord: 1..82
e-value: 7.7E-40
score: 136.7
IPR001931Ribosomal protein S21ePIRSFPIRSF002148RPS21ecoord: 1..82
e-value: 1.7E-37
score: 125.4
IPR001931Ribosomal protein S21ePFAMPF01249Ribosomal_S21ecoord: 1..78
e-value: 2.6E-39
score: 133.3
IPR001931Ribosomal protein S21ePANTHERPTHR1044240S RIBOSOMAL PROTEIN S21coord: 1..77
NoneNo IPR availablePANTHERPTHR10442:SF040S RIBOSOMAL PROTEIN S21coord: 1..77
IPR018279Ribosomal protein S21e, conserved sitePROSITEPS00996RIBOSOMAL_S21Ecoord: 11..19

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_132_length_45408_cov_4.668756contigNODE_132_length_45408_cov_4.668756:12557..12986 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9986.t1Gcaud9986.t1Gracilaria caudata M_176_S67 malemRNANODE_132_length_45408_cov_4.668756 12557..12986 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9986.t1 ID=Gcaud9986.t1|Name=Gcaud9986.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=83bp
MQNDKGEVVDLYIPRKCSASNRLITAKDHASVQINIARVDENGVITGEHD
TVAICGYVRRKGLSDDAFYRIAKEKGYYQSTK*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038579Ribosomal_S21e_sf
IPR001931Ribosomal_S21e
IPR018279Ribosomal_S21e_CS