Gcaud9992.t2 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9992.t2
Unique NameGcaud9992.t2
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length317
Homology
BLAST of Gcaud9992.t2 vs. uniprot
Match: A0A2V3IIU3_9FLOR (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIU3_9FLOR)

HSP 1 Score: 276 bits (705), Expect = 1.740e-88
Identity = 131/237 (55.27%), Postives = 169/237 (71.31%), Query Frame = 0
Query:   52 FSVDGHVSHGINTFNDKRIVDLSESSNIFSSFGSIYELGVVNERGNNASVITERTPFSSLVATIDAFEYQASLGFPAGVGPFNIPIANTPTLTIISQDLNDRVAPRSFSESSDPSVIGLPYLSRESDDQITLADWNRMSTRIVGRCFNNSALVKIVVKNALPNGLYTLWDVGVTDALTDDEALSAGPFGGLPNVIVTNARGYGSIVRRLNYCPVDKCEGSKR---YLSQRKDWIHTV 285
            FSV GH++HG+N FND  + + S SSNIFSSF  + E+GV+   G NAS+ITE TP SS+VATIDAF+++  LGFP G GPFNIPI+  PT  + S  L +RV P SF  SSDP+V+G  YLS   +D +T+ADWNR + R+ G C N +A V I ++NALPNGL+++WDVGV+ AL  +E LS  PFGG+PNV+ T+  G GSI RRLNYCP+D+C+GS R   YLS    + H V
Sbjct:   27 FSVPGHIAHGVNDFNDNLLANYSSSSNIFSSFPPLAEIGVITPGGTNASLITENTPLSSIVATIDAFDFRTFLGFPPGAGPFNIPISQAPTFNLFSSSLLERVTPSSFESSSDPNVVGQVYLSAGVNDNVTVADWNRATGRMTGTCRNGTAHVYIEMQNALPNGLFSMWDVGVSMALAPNETLSLSPFGGIPNVLTTDRNGRGSISRRLNYCPLDECQGSSRCSLYLSMNYHFDHVV 263          
BLAST of Gcaud9992.t2 vs. uniprot
Match: A0A2A5HEK6_9ALTE (Uncharacterized protein n=1 Tax=Alteromonadaceae bacterium TaxID=1916082 RepID=A0A2A5HEK6_9ALTE)

HSP 1 Score: 98.6 bits (244), Expect = 5.480e-20
Identity = 67/237 (28.27%), Postives = 114/237 (48.10%), Query Frame = 0
Query:   39 ALAQLTQATAESSFS--VDGHVSHGINTFNDKRIVDLSESSNI---FSSFGSIYELGVVNERGNNASVITERTPFSSLVATIDAFEYQASLGFPAGVGPFNIPIANTPTLTIISQDLN--DRVAPRSFSESSDPSVIGLPYLSRESDDQITLADWNRMSTRIVGRCFNNSALVKIVVKNALPNGLYTLWDVGVTDALTDDEALSAGPFGGLPNVIVTNARGYGSIVRRLNYCPVDKC 268
            +L+ L  A  + +F   + G+ +HG+N FN+  +VD +         +   ++ E+G      ++A  IT+ T  +  VAT       +SL    GV  F  P     +L +I  +L        R      + +  G  Y++   + + T+ +W  +S     RC ++  +V+I V++A PN LY+LWD+GV +  T+ E + + PFGGLPNV+ T+  G G       +CP   C
Sbjct:   15 SLSPLADAKDQQNFRGVITGYAAHGVNVFNNHTLVDYTSEFPYAPGLNEIPALTEIGYFQPGADDAGTITDETDSNLPVAT------SSSLARFFGVVDFVDPSNFNQSLDLIGSNLMGYQSTTDRGLLVPFELAGPGDTYVAGGVNSRPTVGEWGEISGVARIRCDDDGGVVEISVRDAFPNQLYSLWDIGVLNPKTESEVVYSTPFGGLPNVMTTDENGCGYKKITTPFCPKRSC 245          
BLAST of Gcaud9992.t2 vs. uniprot
Match: UPI001E5FC39C (hypothetical protein n=1 Tax=Marinibactrum sp. C21 TaxID=2904075 RepID=UPI001E5FC39C)

HSP 1 Score: 96.3 bits (238), Expect = 3.300e-19
Identity = 73/227 (32.16%), Postives = 113/227 (49.78%), Query Frame = 0
Query:   40 LAQLTQATAESSFSVD------GHVSHGINTFNDKRIVDLSESS-NIFSSFGSIYELGVVNE---RGNNASVITERTPFSSLVATIDAFEYQASLGFPAGVGPFNIPIANTPTLTIISQDLNDRVAPRSFSE-SSDPSVIGLPYLSRESDDQITLADWNR---MSTRIVGRCFNNSALVKIVVKNALPNGLYTLWDVGVTDALTDDEALSAGPFGGLPNVIVTNARG 252
            L  LT A +  SF+        G++SHGIN +N + I D S +S  +   F +  E+GV  E    G +  VIT  T  S  VAT   F    + G    +   N+P+    +       ++DR+ P SF     DP V    Y S   +   T+ DW +   + T +V +  + ++ V+I +++A PN ++TLWD+G +  L+D E   A P GG+PNV+ T+A G
Sbjct:    8 LVALTVAVSSVSFAAKKVQVFPGYISHGINVYNGELIADYSSTSPGVEWLFEAPREIGVFIEGAPEGTDGGVITAETDRSLPVATTRDFLDFFNPGGEIDLSLLNVPLDQIGSNFFGFTAVDDRIIPPSFDTVEEDPEV----YRSAGVNAAPTVGDWEKARGVMTAVVHK--DGTSTVRITLRDAFPNAVFTLWDIGSSRPLSDTEEGYAVPLGGIPNVVRTDANG 228          
BLAST of Gcaud9992.t2 vs. uniprot
Match: A0A2P5L7M6_9GAMM (Uncharacterized protein n=2 Tax=Methylococcaceae TaxID=403 RepID=A0A2P5L7M6_9GAMM)

HSP 1 Score: 69.3 bits (168), Expect = 1.000e-9
Identity = 63/237 (26.58%), Postives = 99/237 (41.77%), Query Frame = 0
Query:   51 SFSVDGHVSHGINTFNDKRIVDLSESSNIFSSFGSIYELGVVNERGNNASVITERTPFS-------SLVATIDAFEYQASLGFPAGVGPF-NIPIANTPTLTIISQDLNDRVAPRSFSESSDPSVIGLPYLSRESDDQITLADWNRMSTRIVGRCFNN-SALVKIVVKNALPNGLYT---LWDVGVTDALTDDEALSAGPFGGLPNVIVTNARGYGSIVRRLNYCPVDKCEGSKRYL 275
            +F V+G    G N    + +V+L     +   F   +    + E       I +  PF+       SLVAT     Y+ + GFP       NIP+   PT        ++  +   F  +  P          +S+D ITL DW      +   C ++ SA V I ++  +P+ +Y+   +W+   T    +   +   PFGG+PN+ VT+A G G   RRL  CP+D      R L
Sbjct:   39 TFHVNGVAVTGFNEVCGEAVVNLPLPPPLSPDFHGAF----IGEYDTTQGAI-DAIPFTPTNCNPNSLVATTTDPVYRDAFGFPDPDSRLKNIPLRKVPTTVTFDDQRSELSSIGVFPPNPFPPT------KNQSNDPITLGDWLSARGNMTIVCKSDGSASVVIRMRKLIPDSIYSAIAVWNT--TPPFLNQPTVFPLPFGGVPNIFVTDAEGNGVFKRRLAACPMDPTPDGSRLL 262          
BLAST of Gcaud9992.t2 vs. uniprot
Match: A0A3S5I668_9GAMM (Uncharacterized protein n=3 Tax=Pseudoalteromonas TaxID=53246 RepID=A0A3S5I668_9GAMM)

HSP 1 Score: 65.1 bits (157), Expect = 2.670e-8
Identity = 59/221 (26.70%), Postives = 101/221 (45.70%), Query Frame = 0
Query:   53 SVDGHVSHGINTFNDKRIVDLSESSNIFS--SFGSIYEL----GVVNERGNNASVITERTPFSSLVATIDAFEYQASLGFP-AGVGPFNIPIANTPTLTIISQDLNDRVAPRSFSESSDPSVIGLPYLSRESDDQITLADWNRMSTRIVGRCFN-NSALVKIVVKNALPNGLYTLWDVGVTDALTDDEALSAGPFGGLPNVIVTNARGYGSIVRRLNYCPV 265
            +V GH++ G+N +  +++ +   + +  +  SF  + E     G ++ +  +A      T  +S    I+    Q+ L  P A     N PI + PT   +    N     R   E S+P    +P+     ++ ITL  W++   R   +C+N NSA      K+  PN +Y++  + V D   +   L   PFGGLPNV +T+ RG     + +N CP+
Sbjct:   36 TVKGHLTTGVNNYCGRKLFEFPAAYDSLNDLSFQFVGEYDPTPGALDAKPLSAENCESDTILASTTDPINVAWLQSFLDMPDADPRLKNRPIMDKPTYVDLIG--NHGYIERRLPEHSNP----VPFFDGPKEE-ITLGSWSKARGRYKFQCYNDNSAKTVARFKHLFPNSMYSM--LAVWDRAGE---LVVQPFGGLPNVFITDKRGNARYEKEINGCPL 244          
BLAST of Gcaud9992.t2 vs. uniprot
Match: A0A3B0Z8Q7_9ZZZZ (Uncharacterized protein n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B0Z8Q7_9ZZZZ)

HSP 1 Score: 62.0 bits (149), Expect = 1.580e-7
Identity = 47/147 (31.97%), Postives = 66/147 (44.90%), Query Frame = 0
Query:  119 EYQASLGFPA-GVGPFNIPIANTPTLTIISQDLNDRVAPRSFSESSDPSVIGLPYLSRESDDQITLADWNRM--STRIVGRCFNNSALVKIVVKNALPNGLYTLWDVGVTDALTDDEALSAGPFGGLPNVIVTNARGYGSIVRRLNY 262
            E       PA G  P  +P+   PTL  I+  LN  V   S S ++    +  P     + + IT  DW  +  S  IV    N    + + VK  LPN LYT+W   V            GPFGG+PNV+VT+ +G  ++ R L +
Sbjct:   66 ESSVLFNIPADGTDP--VPLRQVPTL-YITDGLNPVVIDESISATNMMQGLAFP----GTPNPITYGDWLNIGQSKLIVKNLNNGMTKINMKVKGLLPNSLYTVWQFNVMPG-------PPGPFGGIPNVLVTDHKGNATLRRTLPF 198          
BLAST of Gcaud9992.t2 vs. uniprot
Match: A6F7D9_9GAMM (Uncharacterized protein n=1 Tax=Moritella sp. PE36 TaxID=58051 RepID=A6F7D9_9GAMM)

HSP 1 Score: 59.7 bits (143), Expect = 1.610e-6
Identity = 52/234 (22.22%), Postives = 105/234 (44.87%), Query Frame = 0
Query:   54 VDGHVSHGINTFNDKRIVDLSES----SNIFSSFGSIYELGVVNERGNNASVITER-----TPFSSLVATIDAFEYQASLGFPAGVGPF-NIPIANTPTLTIISQDLNDRVAPRSFSESSDPSVIG-LPYLSRESDDQITLADWNRMSTRIVGRCFNNSALVKIV-VKNALPNGLYTLWDVGVTDALTDDEALSAGPFGGLPNVIVTNARGYGSIVRRLNYCPVDKCEGSKRYL 275
            + GH++ G+N +  K++    ++    +++   F   Y+    + +  +A +++E      T  +S    I+    Q+ L  P       N+ + + PT         D V    + + + P+    +PY     DD ITL +W++        C+++ +   +   +   PN +Y++  +GV D    + +L   PFGGLPNV++T+  G     +R+N CP+   + +   L
Sbjct:   34 IKGHLTTGVNNYCGKKLFKFPDAYASLNDLSFQFVGQYD---PDPQAQDAILLSEENCNDDTILASTTDPINVAWLQSFLDMPDADSRLKNVKLMDKPTYV-------DLVGNHGYIDRTRPTHSNPVPYFDGPQDD-ITLGEWSKARGNYQFICYDDGSAKTVARFRKLFPNSMYSM--LGVWDK---EGSLVVQPFGGLPNVMITDKHGRARYEKRVNGCPLRPSDDNSELL 251          
The following BLAST results are available for this feature:
BLAST of Gcaud9992.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A2V3IIU3_9FLOR1.740e-8855.27Uncharacterized protein n=2 Tax=Gracilariopsis cho... [more]
A0A2A5HEK6_9ALTE5.480e-2028.27Uncharacterized protein n=1 Tax=Alteromonadaceae b... [more]
UPI001E5FC39C3.300e-1932.16hypothetical protein n=1 Tax=Marinibactrum sp. C21... [more]
A0A2P5L7M6_9GAMM1.000e-926.58Uncharacterized protein n=2 Tax=Methylococcaceae T... [more]
A0A3S5I668_9GAMM2.670e-826.70Uncharacterized protein n=3 Tax=Pseudoalteromonas ... [more]
A0A3B0Z8Q7_9ZZZZ1.580e-731.97Uncharacterized protein n=1 Tax=hydrothermal vent ... [more]
A6F7D9_9GAMM1.610e-622.22Uncharacterized protein n=1 Tax=Moritella sp. PE36... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_132_length_45408_cov_4.668756contigNODE_132_length_45408_cov_4.668756:24847..26286 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9992.t2Gcaud9992.t2Gracilaria caudata M_176_S67 malemRNANODE_132_length_45408_cov_4.668756 24847..26286 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9992.t2 ID=Gcaud9992.t2|Name=Gcaud9992.t2|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=317bp
MSSVTYDPENMFQSSGCERENHASEASVMIPWFLCLIWALAQLTQATAES
SFSVDGHVSHGINTFNDKRIVDLSESSNIFSSFGSIYELGVVNERGNNAS
VITERTPFSSLVATIDAFEYQASLGFPAGVGPFNIPIANTPTLTIISQDL
NDRVAPRSFSESSDPSVIGLPYLSRESDDQITLADWNRMSTRIVGRCFNN
SALVKIVVKNALPNGLYTLWDVGVTDALTDDEALSAGPFGGLPNVIVTNA
RGYGSIVRRLNYCPVDKCEGSKRYLSQRKDWIHTVSEKVTSSRGIYEGSS
NQYSTLPVSQSFPAVR*
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