Gcaud236.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud236.t1
Unique NameGcaud236.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length465
Homology
BLAST of Gcaud236.t1 vs. uniprot
Match: R7Q5R6_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q5R6_CHOCR)

HSP 1 Score: 282 bits (721), Expect = 2.130e-86
Identity = 184/474 (38.82%), Postives = 238/474 (50.21%), Query Frame = 0
Query:    8 SEKDATVRQTILANLEAPRLQGVATKHFTAFQKRRDLYEKQLAEKNREPGVNVTPTSFKASIDDTLLDIFITAGWIDAASVEEITEEQLQNCVRERANFEPEGDDLSRIRYLIRKVKMDDSIKDPEQRVWTLHYKYVTTLHSHGLRDLPKTKPHIAIKHILKVIKPKRLRERMQDIVEWKKDEHFEKKDFGAFMRELARQAKKLEEKR-----------GPDRISESEDESEHDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDS------------------------------------------------------------------KGEI-------------------------------------------FDQILLAKPALQLQKLDPPHLYNGIAKNGEPITCTDEISLDIQLRIRHGTRLALRSMLWKVGEAAIDQVIIGREVLQSIGCDNRAILAA 361
            S  D TVRQTI+ NLEAPRL+GVATK+FTAF K+RDLYEKQLAEKNREPGV++TPTS++ASIDD+ L IF+TA WI A S+E I+EEQ++ CV+E+A+++ E  +L RI  L++ VKMD S+K+ E RVW+LH +Y+  L + GL DLP  KPHIAIKHILK IKP RLR R++ I++W+K E F KKDFGAFMR LA QAK LE ++             DR SE E   +HD                                     S                                                                  KG +                                           FD I  A   L +  L PPH Y+ + ++   +TC   ++ D+ LRIRHG +L LR++ WKV +   + VIIGREVLQ+IGCDN+A+L A
Sbjct:    9 STSDGTVRQTIITNLEAPRLEGVATKYFTAFLKKRDLYEKQLAEKNREPGVHITPTSYRASIDDSYLRIFLTAKWIKAESLEAISEEQIRECVKEKASYKLEEYELDRIDNLVKDVKMDMSLKEAEDRVWSLHLRYLEVLEAAGLADLPTRKPHIAIKHILKRIKPFRLRSRIRSILQWRKGEDFGKKDFGAFMRVLAEQAKTLEMEQVSREQQMASSSDSDRSSE-ESSGKHDKRHRVTKKGKKSRRGRRGDAKRGVSSGQDKHPKDSLSSTESKKRRSFAPKCFNPACDGYHFIDDCPISSEEQRRRYKDEYRARKQRKMRFDTGSGSADRQIGQRKGSVRRIGADAIDPHSSLFSATFIDSAVESVIMADQGSDGNIMPPAVFDMIAEAASNLHVASLVPPHTYSFVDQD-RGLTCRRSMTADVHLRIRHGVKLVLRNITWKVSDQPAECVIIGREVLQAIGCDNKAMLQA 480          
BLAST of Gcaud236.t1 vs. uniprot
Match: A0A2V3IG26_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IG26_9FLOR)

HSP 1 Score: 157 bits (398), Expect = 5.440e-40
Identity = 87/235 (37.02%), Postives = 150/235 (63.83%), Query Frame = 0
Query:    3 SNQGESEKDATVRQTILANLEAPRLQGVATKHFTAFQKRRDLYEKQLAEKNREPGVNVTPTSFKASIDDTLLDIFITAGWIDAASVEEITEEQLQNCVRERANFEPEGDDLSRIRYLIRKVKMDDSIKDP--EQRVWTLHYKYVTTLHSHGLRDLPKTKPHIAIKHILKVIKPKRLRERMQDIVEWKKDEHFEKKDFGAFMRELARQAKKLEEK------RGPDRISESEDESEH 229
            +  G      TVR+TI+ ++EAPRL+ ++T+ F  F+++R++YE+++AEKN E G+ V  T+++ SI   +LD+F+TA W+   SVE+ITE+ L+ CV E+A   PE  DL++I   ++ V+MD + K    + +V  L  KY TTL + G  +  + +P +A+KH++K +  ++LR+RM   ++ +K E F KK++  FMREL ++AK+++        +     S+S+D+ EH
Sbjct:    8 AGSGPETATDTVRKTIIESVEAPRLKDISTEDFVLFKQKREVYERKIAEKNAESGIQVPLTTYRNSITKPVLDMFVTACWVPVESVEDITEQHLRQCVEEQARVNPEEYDLAQIERDLKYVRMDKNTKSNSLDMQVLRLGLKYSTTLENLGYSEFIEKQPQLAVKHVIKRVTHEQLRKRMLLTIKLRKKEGF-KKNYKVFMRELVKEAKQIDRHEAAKGFKARSNFSDSDDDLEH 241          
BLAST of Gcaud236.t1 vs. uniprot
Match: A0A2V3IRL8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRL8_9FLOR)

HSP 1 Score: 154 bits (388), Expect = 2.730e-37
Identity = 88/235 (37.45%), Postives = 148/235 (62.98%), Query Frame = 0
Query:    3 SNQGESEKDATVRQTILANLEAPRLQGVATKHFTAFQKRRDLYEKQLAEKNREPGVNVTPTSFKASIDDTLLDIFITAGWIDAASVEEITEEQLQNCVRERANFEPEGDDLSRIRYLIRKVKMDDSIKDP--EQRVWTLHYKYVTTLHSHGLRDLPKTKPHIAIKHILKVIKPKRLRERMQDIVEWKKDEHFEKKDFGAFMRELARQAKKLEEK------RGPDRISESEDESEH 229
            +  G      TVRQTI+ ++EAPRL+ ++T+ F  F+++ ++YE+Q+AEKN E G+ V   ++  SI   +LDIF+TA W+   SVE+ITE+ L+ CV E A   PE  +L++I   ++ V+MD + K    E +V  L  KY TTL + G  +  + +P +A++H++K +  ++LR+RM   ++ +K+E F KK++ AFMREL ++AK+++        +     S+S+D+ EH
Sbjct:    8 AGSGPETPTDTVRQTIIESVEAPRLRDISTEDFVLFKQKLEVYERQIAEKNAESGIQVPLKTYWNSITKPVLDIFVTACWVPVESVEDITEQHLRQCVEEPAQVNPEEYNLAQIERDLKYVRMDKNTKSNSLEMQVLRLGLKYSTTLENLGYSEFIEKQPQLAVEHVIKRVTHEQLRKRMLLTIKLRKEEGF-KKNYKAFMRELLKEAKQIDRHEAAKGLKARSNFSDSDDDLEH 241          
BLAST of Gcaud236.t1 vs. uniprot
Match: A0A2V3IZ32_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZ32_9FLOR)

HSP 1 Score: 127 bits (320), Expect = 5.890e-31
Identity = 66/167 (39.52%), Postives = 105/167 (62.87%), Query Frame = 0
Query:    3 SNQGESEKDATVRQTILANLEAPRLQGVATKHFTAFQKRRDLYEKQLAEKNREPGVNVTPTSFKASIDDTLLDIFITAGWIDAASVEEITEEQLQNCVRERANFEPEGDDLSRIRYLIRKVKMDDSIKDP--EQRVWTLHYKYVTTLHSHGLRDLPKTKPHIAIKHI 167
            +  G      TVRQTI+ ++EAPRL+ ++T+ F  F+++R++YE+Q+AEKN E G  V   +++ SI   +LD+F+TA W+   SVE ITE+ L+ CV ERA   PE  DL++I   ++ V+MD + K    E +V  L   Y TTL + G  +  + +P +A++H+
Sbjct:    8 AGSGPETATDTVRQTIIESVEAPRLKDISTEDFVLFKQKREVYERQIAEKNAESGTQVPLKTYRNSITKPVLDMFVTACWVPVESVEGITEQHLRQCVEERARVYPEQYDLAQIERDLKYVRMDKNTKSNSLEMQVLWLGLNYSTTLENLGYSEFIEKQPQLAVEHV 174          
BLAST of Gcaud236.t1 vs. uniprot
Match: A0A2V3IG25_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IG25_9FLOR)

HSP 1 Score: 121 bits (303), Expect = 1.320e-28
Identity = 65/177 (36.72%), Postives = 115/177 (64.97%), Query Frame = 0
Query:   13 TVRQTILANLEAPRLQGVATKHFTAFQKRRDLYEKQLAEKNREPGVNVTPTSFKASIDDTLLDIFITAGWIDAASVEEITEEQLQNCVRERANFEPEGDDLSRIRYLIRKVKMDDSIKDPEQRVWTLHYKYVTTLHSHGLRDLPKTKPHIAIKHILKVIKPKRLRERMQDIVEWKKD 189
            +VRQ +L   +A RL G++T+ F +F+++R++YE+++ EK+ E G  +  TS++ SI + +L++F++A W+  +SV++ITE+ L+  + ERA   PE  DL++I   I K+ MD S+K  E +VW L  +Y T L   G   + + +P +AI  IL+ I   +LR+RM+  ++ +K+
Sbjct:   16 SVRQ-LLRRSKALRLTGISTEAFLSFKQKREIYERRVTEKSSEHGTTIPATSYRNSIQNPVLEMFVSAQWVYVSSVDDITEDHLKASIEERAKVNPEDYDLAQIEKGICKICMDRSVKTLEMQVWQLGLQYATKLEEIGYSKVIQMQPKLAIGRILRRISHLQLRKRMKLTLKHRKE 191          
BLAST of Gcaud236.t1 vs. uniprot
Match: R7QD00_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QD00_CHOCR)

HSP 1 Score: 99.4 bits (246), Expect = 1.410e-20
Identity = 53/187 (28.34%), Postives = 103/187 (55.08%), Query Frame = 0
Query:  283 LQLQKLDPPHLYNGIAKNGEP-----ITCTDEISLDIQLRIRHGTRLALRSMLWKVGEAAIDQVIIGREVLQSIGCDNRAILAAACDKNDGVINIPTAMAEDAKKRNAAEAGAICTVMREGLYHSSA-MEGDDGLEDSKVYIDLGDDEPGVLDEALQKLIAEAEANGMSETGVEELTEMIQEFKPVF 463
            + +++   P  +N +   G+      + C  E++L+++L IRHG  L LR+M W V    + + ++GR VL+++G + + +L AA D+    I I + + ++   +     G++  +M +G++HS      D G  +   ++DLG+D    +D+AL++L+ E+  NG+SE G   L  M+  ++ VF
Sbjct:    1 MSVRQYSTPRNFNWVILKGQNREDIYVRCDKEVTLNVELFIRHGFYLELRNMAWYVATTEVGEPLLGRPVLEALGINTKELLVAAIDRMGHSIEIGSLVPDEVYPK-----GSVARLMHQGIFHSDGEYVADHGDSEDDTWLDLGEDTASEIDQALERLVQESVDNGISENGKARLRSMLDRYRDVF 182          
BLAST of Gcaud236.t1 vs. uniprot
Match: A0A2V3IKC4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKC4_9FLOR)

HSP 1 Score: 91.3 bits (225), Expect = 9.690e-19
Identity = 42/95 (44.21%), Postives = 68/95 (71.58%), Query Frame = 0
Query:    3 SNQGESEKDATVRQTILANLEAPRLQGVATKHFTAFQKRRDLYEKQLAEKNREPGVNVTPTSFKASIDDTLLDIFITAGWIDAASVEEITEEQLQ 97
            +  G      TVRQTI+ ++EAPRL+ ++T++F  F+++R++YE+Q+AEKN E G+ V  T+ + SI   +LD+F+TA W+   SVE+ITE+ L+
Sbjct:    8 AGSGPETATDTVRQTIIESVEAPRLKDISTEYFVLFKQKREVYERQIAEKNAELGIQVPLTTLRNSITKPVLDMFVTACWVAVDSVEDITEQHLR 102          
BLAST of Gcaud236.t1 vs. uniprot
Match: A0A2V3ISV8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISV8_9FLOR)

HSP 1 Score: 82.8 bits (203), Expect = 7.310e-14
Identity = 47/151 (31.13%), Postives = 92/151 (60.93%), Query Frame = 0
Query:   64 SFKASIDDTLLDIFITAGWIDAASVEEITEEQLQNCVRERANFEPEGDDLSRIRYLIRKVKMDDSIKDP--EQRVWTLHYKYVTTLHSHGLRDLPKTKPHIAIKHILKVIKPKRLRERMQDIVEWKKDEHFEKKDFGAFMRELARQAKKLE 212
            ++++SIDD++L++F+ A WI+A +++E+ EE+ + C+ E A+ + +  DL  I   I  V+M+   ++   E+++W    KY TT    G  +   TKP +AI+HI + I  + L+  ++ I++  K+E+  + DF  F+R+   +AK ++
Sbjct:    2 TYRSSIDDSVLELFLIANWIEALTIDEVMEEEPKACIEECAHIDEKDYDLGIIERDIFHVQMEKPCREANLEKQIWRSCLKYKTTRKKCGYDNFIDTKPKLAIRHIYRKITDRSLKTSIKLILDLHKEEY--EIDFHNFVRKAVEEAKTVD 150          
BLAST of Gcaud236.t1 vs. uniprot
Match: A0A7S1TH60_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TH60_9RHOD)

HSP 1 Score: 62.0 bits (149), Expect = 4.790e-8
Identity = 39/133 (29.32%), Postives = 68/133 (51.13%), Query Frame = 0
Query:   22 LEAPRLQGVATKHFTAFQKRRDLYEKQLAEKNREPGVNVTPTSFKASIDDTLLDIFITAGWI--DAASVEEITEEQLQNCVRERANFEPEGDDLSRIRYLIRKVKMDDSIK-DPEQRVWTLHYKYVTTLHSHG 151
            +E P L+G +T     F ++R  YE ++ EKN++PGV++TP  +  SI  +L D  I A     +     ++T+  ++  +++ A   P+  D   +  L+ KVKM +  + D E R   L ++Y   L   G
Sbjct:    2 IEHPILRGCSTSDAVRFLEKRREYEFEVQEKNKQPGVSMTPIPYMRSISRSLADALIRARKFGSEVDDYNKLTDTLVETYIKDLAGKSPQAPDSKYLDCLVHKVKMKNYQEPDGEARALDLFHRYCRALEQGG 134          
The following BLAST results are available for this feature:
BLAST of Gcaud236.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
R7Q5R6_CHOCR2.130e-8638.82Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IG26_9FLOR5.440e-4037.02Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IRL8_9FLOR2.730e-3737.45Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IZ32_9FLOR5.890e-3139.52Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IG25_9FLOR1.320e-2836.72Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QD00_CHOCR1.410e-2028.34Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IKC4_9FLOR9.690e-1944.21Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ISV8_9FLOR7.310e-1431.13Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7S1TH60_9RHOD4.790e-829.32Hypothetical protein (Fragment) n=1 Tax=Compsopogo... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 35..55
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 208..267

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1316_length_11484_cov_5.657158contigNODE_1316_length_11484_cov_5.657158:5537..7246 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud236.t1Gcaud236.t1Gracilaria caudata M_176_S67 malemRNANODE_1316_length_11484_cov_5.657158 5537..7246 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud236.t1 ID=Gcaud236.t1|Name=Gcaud236.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=465bp
MSSNQGESEKDATVRQTILANLEAPRLQGVATKHFTAFQKRRDLYEKQLA
EKNREPGVNVTPTSFKASIDDTLLDIFITAGWIDAASVEEITEEQLQNCV
RERANFEPEGDDLSRIRYLIRKVKMDDSIKDPEQRVWTLHYKYVTTLHSH
GLRDLPKTKPHIAIKHILKVIKPKRLRERMQDIVEWKKDEHFEKKDFGAF
MRELARQAKKLEEKRGPDRISESEDESEHDDSSRSTEKESRKFERSKNSK
DKRSGKKRGRNDQGGRDSKGEIFDQILLAKPALQLQKLDPPHLYNGIAKN
GEPITCTDEISLDIQLRIRHGTRLALRSMLWKVGEAAIDQVIIGREVLQS
IGCDNRAILAAACDKNDGVINIPTAMAEDAKKRNAAEAGAICTVMREGLY
HSSAMEGDDGLEDSKVYIDLGDDEPGVLDEALQKLIAEAEANGMSETGVE
ELTEMIQEFKPVFG*
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