Gcaud2169.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2169.t1
Unique NameGcaud2169.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length163
Homology
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BLAST of Gcaud2169.t1 vs. uniprot
Match: A0A2V3J529_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J529_9FLOR)

HSP 1 Score: 204 bits (518), Expect = 1.350e-60
Identity = 99/145 (68.28%), Postives = 118/145 (81.38%), Query Frame = 0 
Query:    1 MKLWEDHDLDDPYEPIFITKDDPLDSKARRSFISEETPPYASGVDHHKLFGLPRKSYPPFYFNGPDISVGDGDPDVEISVQRIQKPMGEPSEVTSSSLDDAPRLPETEESNYKTAVMAASNFNNSLRNDRNDLRRWLVEDLAVRE 145
            MKLWEDHD DDPY+PIFITKD+  D+KARRSFI E+TPPYAS VDH  LFG+P K YP +YF+GPDISVG GDPD+E+SV+R+QKP+GE SE TSSSLDD  +   + ES Y +AV+AAS +N SLR++R  LRRWLVEDLA  E
Sbjct:  334 MKLWEDHDPDDPYQPIFITKDERFDTKARRSFIFEDTPPYASRVDHRNLFGVPSKDYPLYYFDGPDISVGGGDPDLEVSVKRLQKPVGEHSEETSSSLDDVIKRDASSESGYASAVVAASEYNKSLRDERIHLRRWLVEDLAAEE 478
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BLAST of Gcaud2169.t1 vs. uniprot
Match: R7Q737_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q737_CHOCR)

HSP 1 Score: 137 bits (346), Expect = 1.580e-35
Identity = 65/141 (46.10%), Postives = 94/141 (66.67%), Query Frame = 0 
Query:    1 MKLWEDHDLDDPYEPIFITKDDPLDSKARRSFISEETPPYASGVDHHKLFGLPRKSYPPFYFNGPDISVGDGDPDVEISVQRIQKPMGEPSEVTSSSLDDAPRLPETEESNYKTAVMAASNFNNSLRNDRNDLRRWLVEDL 141
            ++LWED DLDDPYEPIF+T+DD  D KAR+S++ E+  PYA   ++  LFG+P   YP ++F GP +S  DG+PD+E+ V R Q+   E SEV+ +S +            Y +AV+ A+ +N+ LR DR +LR+WLVED+
Sbjct:  312 LRLWEDRDLDDPYEPIFVTEDDEFDRKARKSWLVEDKAPYAEQFEYQNLFGVPSSDYPMYFFKGPSLSNVDGEPDIEVVVHRKQQVKVETSEVSGASEEINSHARIGGSDTYSSAVLEAAQYNSILRRDRTELRKWLVEDV 452
The following BLAST results are available for this feature:
BLAST of Gcaud2169.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J529_9FLOR1.350e-6068.28Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q737_CHOCR1.580e-3546.10Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 83..116
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 145..162
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 140..162

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1305_length_11579_cov_8.061368contigNODE_1305_length_11579_cov_8.061368:7075..7563 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2169.t1Gcaud2169.t1Gracilaria caudata M_176_S67 malemRNANODE_1305_length_11579_cov_8.061368 7075..7563 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2169.t1 ID=Gcaud2169.t1|Name=Gcaud2169.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=163bp
MKLWEDHDLDDPYEPIFITKDDPLDSKARRSFISEETPPYASGVDHHKLF
GLPRKSYPPFYFNGPDISVGDGDPDVEISVQRIQKPMGEPSEVTSSSLDD
APRLPETEESNYKTAVMAASNFNNSLRNDRNDLRRWLVEDLAVREKSEDE
DDEEDGDQNSSE*
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