Gcaud1955.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1955.t1
Unique NameGcaud1955.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length230
Homology
BLAST of Gcaud1955.t1 vs. uniprot
Match: A0A2V3IVH0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVH0_9FLOR)

HSP 1 Score: 340 bits (873), Expect = 1.610e-116
Identity = 171/234 (73.08%), Postives = 200/234 (85.47%), Query Frame = 0
Query:    1 MAKGEPATNLDLSY----TSTAPSQFITPSEAAHHQVQPAISPFPTHSPSPPPPAEDNR-FVFLDKLPKVVWNVDPTIKLKLRKYFYPLGVTRLSLGADLDLRHKKLSFKWSWRDRIIGGRLEFHEDKISLTKTFNIDTRTKLDVKAAFDIHSRKTLFSLNVRPFLGILPYDRPPAGLSVRQKIPVDKRLQIEFQGRLSVPEAKISNDSVSAFSLGEGNFVFDLEELNFRFLVQ 229
            M  GEP   +D SY    TST  SQ++TP+EAA HQ+QPA+S   T  P PPP    +R F+  D+LPK+VWN+DP IKLK RKYFYPL VTRLSLGADLDLR K+LSFKWSWRDRIIG RLEF +DKIS+TK F+IDTRTKLDV+A+FDIHSRKTLFSLN+RPFLGILP+DRPPAGL++RQK+P+DKR+Q+EFQGRLSVPEA+ISN++ SAFSLGEGNFVFDLEELNFRFL+Q
Sbjct:    1 MGTGEPV--VDFSYAPPSTSTT-SQYLTPAEAAQHQLQPAVSSL-TPPPLPPPEGSSHRRFLVFDELPKIVWNIDPIIKLKFRKYFYPLAVTRLSLGADLDLRRKQLSFKWSWRDRIIGSRLEFADDKISITKRFDIDTRTKLDVRASFDIHSRKTLFSLNIRPFLGILPHDRPPAGLTIRQKVPMDKRMQVEFQGRLSVPEARISNETASAFSLGEGNFVFDLEELNFRFLLQ 230          
BLAST of Gcaud1955.t1 vs. uniprot
Match: M2XGM5_GALSU (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XGM5_GALSU)

HSP 1 Score: 146 bits (369), Expect = 8.090e-41
Identity = 69/161 (42.86%), Postives = 105/161 (65.22%), Query Frame = 0
Query:   63 PKVVWNVDPTIKLKLRKYFYPLGVTRLSLGADLDLRHKKLSFKWSWRDRIIGGRLEFHEDKISLTKTFNIDTRTKLDVKAAFDIHSRKTLFSLNVRPFLGILPYDRPPAGLSVRQKIPVDKRLQIEFQGRLSVPEAKISNDSVSAFSLGEGNFVFDLEELN 223
            PK+VW  +P+ KLKLRK+FYPL +T+L+LGADLDL+H   +F  +W+DRIIGGRL   ++++SL K F +D +   ++  ++D    +TLF     P+ GI     PP G+++R+KIP+D R +++    L  PEA     S  A S G G+F+ D+++LN
Sbjct:    5 PKLVWKCNPSTKLKLRKHFYPLALTKLTLGADLDLQHGFWTFHTAWKDRIIGGRLAVKDNQVSLVKEFLVDQKNTFNIHISYDWKIGQTLFGFRFSPYRGIQTNTHPP-GMALRRKIPLDYRTKLDVFAWLQFPEATCEATSTGAVSFGTGDFILDIQQLN 164          
BLAST of Gcaud1955.t1 vs. uniprot
Match: A0A7S0V7N4_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0V7N4_9CRYP)

HSP 1 Score: 129 bits (325), Expect = 4.040e-34
Identity = 66/165 (40.00%), Postives = 99/165 (60.00%), Query Frame = 0
Query:   63 PKVVWNVDPT-IKLKLRKYFYPLGVTRLSLGADLDLRHKKLSFKWSWRDRIIGGRLEFHEDKISLTKTFNIDTRTKLDVKAAFDIHSRKTLFSLNVRPFLGILPY---DRPPAGLSVRQKIPVDKRLQIEFQGRLSVPEAKISNDSVSAFSLGEGNFVFDLEELN 223
            P + W + P   K+KLRK  +PLG+TRL++GAD D    + S K SW+D +IGG L  H  ++++TK F +D R  L +KAAFD H++K+L    ++P +G+      +RP  G S R+++P+   L+IE    + +PEA  +  S     LG G+F  DL ELN
Sbjct:   16 PGIKWQLRPERTKIKLRKRIFPLGLTRLTVGADYDPIAGEWSIKTSWKDTVIGGHLNIHGTELAMTKDFRVDDRNALSLKAAFDWHTKKSLIGFTLKPMMGLNAMSGSNRP--GFSFRKRVPLTDNLEIELDSVVEIPEATYTTSSSQGVCLGIGDFCVDLRELN 178          
BLAST of Gcaud1955.t1 vs. uniprot
Match: A0A7S0HRP7_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HRP7_9CRYP)

HSP 1 Score: 130 bits (328), Expect = 1.110e-33
Identity = 67/165 (40.61%), Postives = 98/165 (59.39%), Query Frame = 0
Query:   63 PKVVWNVDP--TIKLKLRKYFYPLGVTRLSLGADLDLRHKKLSFKWSWRDRIIGGRLEFHEDKISLTKTFNIDTRTKLDVKAAFDIHSRKTLFSLNVRPFLGILP--YDRPPAGLSVRQKIPVDKRLQIEFQGRLSVPEAKISNDSVSAFSLGEGNFVFDLEELN 223
            P + WN+ P  TI LK+RK  YPLG+TRL+LGAD D      S K SWRD +IGG +     +I++TK FN+D RT L +KA FD  ++K++    +RP  G+    Y      L +R+++P+ +   +EF   L +P+A  ++ S    SLG G+F  D+ ELN
Sbjct:   92 PGITWNLKPKRTI-LKIRKRLYPLGITRLTLGADFDPMEGSWSIKTSWRDLVIGGNINIQGSEIAITKDFNVDERTSLWLKAGFDWQTKKSMVGFKIRPNPGLSARMYSESGPMLQMRKRVPIHENFHVEFDSSLQLPDAAYTSTSGGKLSLGLGDFKVDMRELN 255          
BLAST of Gcaud1955.t1 vs. uniprot
Match: L1ISR6_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1ISR6_GUITC)

HSP 1 Score: 122 bits (306), Expect = 2.490e-30
Identity = 68/167 (40.72%), Postives = 100/167 (59.88%), Query Frame = 0
Query:   63 PKVVWNVDP--TIKLKLRKYFYPLGVTRLSLGADLD--LRHKKLSFKWSWRDRIIGGRLEFHEDKISLTKTFNIDTRTKLDVKAAFDIHSRKTLFSLNVRPFLGILP--YDRPPAGLSVRQKIPVDKRLQIEFQGRLSVPEAKISNDSVSAFSLGEGNFVFDLEELN 223
            P + WN+ P  TI LK+RK  YPLG+TRL+LGAD D  L   + S K SWRD +IGG +     +I++TK FN+D RT L +KA FD  ++K++    +RP  G+    Y      L +R+++P+ +   +EF    S+P+A  ++ S    SLG G+F  D+ ELN
Sbjct:  102 PGITWNLKPKRTI-LKIRKRLYPLGITRLTLGADFDPMLGSWRRSVKTSWRDLVIGGNINIQGSEIAITKDFNVDERTSLWLKAGFDWQTKKSMIGFKIRPNPGLSARMYSESGPMLQMRKRVPLHENFHVEFD---SLPDAAYTSTSGGKLSLGLGDFKVDMRELN 264          
BLAST of Gcaud1955.t1 vs. uniprot
Match: M2Y007_GALSU (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y007_GALSU)

HSP 1 Score: 115 bits (287), Expect = 3.540e-29
Identity = 52/117 (44.44%), Postives = 80/117 (68.38%), Query Frame = 0
Query:   63 PKVVWNVDPTIKLKLRKYFYPLGVTRLSLGADLDLRHKKLSFKWSWRDRIIGGRLEFHEDKISLTKTFNIDTRTKLDVKAAFDIHSRKTLFSLNVRPFLGILPYDRPPAGLSVRQKI 179
            PK+VW  +P+ KLKLRK+FYPL +T+L+LGADLDL+H   +F  +W+DRIIGGRL   ++++SL K F +D +   ++  ++D    +TLF     P+ GI     PP G+++R+K+
Sbjct:    5 PKLVWKCNPSTKLKLRKHFYPLALTKLTLGADLDLQHGFWTFHTAWKDRIIGGRLAVKDNQVSLVKEFLVDQKNTFNIHISYDWKIGQTLFGFRFSPYRGIQTNTHPP-GMALRRKV 120          
BLAST of Gcaud1955.t1 vs. uniprot
Match: A0A1X6PGG9_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PGG9_PORUM)

HSP 1 Score: 86.3 bits (212), Expect = 3.100e-16
Identity = 35/69 (50.72%), Postives = 51/69 (73.91%), Query Frame = 0
Query:   62 LPKVVWNVDPTIKLKLRKYFYPLGVTRLSLGADLDLRHKKLSFKWSWRDRIIGGRLEFHEDKISLTKTF 130
            +P + W+V P  +L+LRK F+P  VTRLSLG D+D R   L+F+WSW+DR++GGRL +   +++LTK F
Sbjct:    1 MPPIEWHVRPATRLQLRKIFHPFAVTRLSLGVDVDARTGGLAFRWSWKDRLVGGRLSWSAGEVALTKRF 69          
The following BLAST results are available for this feature:
BLAST of Gcaud1955.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A2V3IVH0_9FLOR1.610e-11673.08Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
M2XGM5_GALSU8.090e-4142.86Uncharacterized protein n=1 Tax=Galdieria sulphura... [more]
A0A7S0V7N4_9CRYP4.040e-3440.00Hypothetical protein n=1 Tax=Hemiselmis tepida Tax... [more]
A0A7S0HRP7_9CRYP1.110e-3340.61Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
L1ISR6_GUITC2.490e-3040.72Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
M2Y007_GALSU3.540e-2944.44Uncharacterized protein n=1 Tax=Galdieria sulphura... [more]
A0A1X6PGG9_PORUM3.100e-1650.72Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 33..52

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1304_length_11589_cov_5.861106contigNODE_1304_length_11589_cov_5.861106:3778..4467 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1955.t1Gcaud1955.t1Gracilaria caudata M_176_S67 malemRNANODE_1304_length_11589_cov_5.861106 3778..4467 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1955.t1 ID=Gcaud1955.t1|Name=Gcaud1955.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=230bp
MAKGEPATNLDLSYTSTAPSQFITPSEAAHHQVQPAISPFPTHSPSPPPP
AEDNRFVFLDKLPKVVWNVDPTIKLKLRKYFYPLGVTRLSLGADLDLRHK
KLSFKWSWRDRIIGGRLEFHEDKISLTKTFNIDTRTKLDVKAAFDIHSRK
TLFSLNVRPFLGILPYDRPPAGLSVRQKIPVDKRLQIEFQGRLSVPEAKI
SNDSVSAFSLGEGNFVFDLEELNFRFLVQ*
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