Gcaud7955.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7955.t1
Unique NameGcaud7955.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length176
Homology
BLAST of Gcaud7955.t1 vs. uniprot
Match: A0A2V3J1T4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1T4_9FLOR)

HSP 1 Score: 118 bits (295), Expect = 1.950e-30
Identity = 59/171 (34.50%), Postives = 101/171 (59.06%), Query Frame = 0
Query:    1 MVHSRKEALETAVTSCIRDTFQTEEARNKLSQACESLSLTDEAFQTILSDLTQMIVSNALEQITQWSQENDMPRKWDTIDRFAIVAPAMAATMNENIALPGNTIPHLKLTEQLVAQKQKELDKLQQIASQRHTTLTVINRQIDEQENRTQNLTNNIDNSFRQCAERLESCA 171
            MV  RK A+E A+T  +R+T + E    KL  A  S +LTD++ + +LS+LT +  S A+E++ QW+ E+D+   W+ +DR  ++ PA+    NE+   P +++P  +L   L+AQK+KE+D+LQ I S+    +  + RQ+            N+D +F+ C ++LE+ A
Sbjct:    1 MVLERKYAIEEAITFSVRNTLEAEGMWRKLKDAVPSANLTDDSAKELLSELTSLAASKAIEKVMQWAHEHDLSTHWEALDRSDMITPALMEITNESTTKPDSSVPATELKNHLLAQKRKEVDRLQTILSEEENIIADLKRQVXXXXXXXXXXXXNVDATFKDCIQKLENDA 171          
BLAST of Gcaud7955.t1 vs. uniprot
Match: A0A2V3ILW0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILW0_9FLOR)

HSP 1 Score: 75.9 bits (185), Expect = 7.110e-15
Identity = 35/96 (36.46%), Postives = 59/96 (61.46%), Query Frame = 0
Query:    1 MVHSRKEALETAVTSCIRDTFQTEEARNKLSQACESLSLTDEAFQTILSDLTQMIVSNALEQITQWSQENDMPRKWDTIDRFAIVAPAMAATMNEN 96
            MV  RK A+E A+T  +R+T + E    KL  A  S +LTD++ + +LS+LT +  S A+E++ QW+  +D+   W+ +DR  ++ PA+    NE+
Sbjct:    1 MVLERKYAIEEAITFSVRNTLEAEGMWRKLKDAVPSANLTDDSAKELLSELTSLAASKAIEKVMQWAHGHDLSTHWEALDRSDMITPALMEITNES 96          
The following BLAST results are available for this feature:
BLAST of Gcaud7955.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J1T4_9FLOR1.950e-3034.50Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ILW0_9FLOR7.110e-1536.46Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 107..127
NoneNo IPR availableCOILSCoilCoilcoord: 135..162

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1289_length_11770_cov_4.499786contigNODE_1289_length_11770_cov_4.499786:6215..6742 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7955.t1Gcaud7955.t1Gracilaria caudata M_176_S67 malemRNANODE_1289_length_11770_cov_4.499786 6215..6742 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7955.t1 ID=Gcaud7955.t1|Name=Gcaud7955.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=176bp
MVHSRKEALETAVTSCIRDTFQTEEARNKLSQACESLSLTDEAFQTILSD
LTQMIVSNALEQITQWSQENDMPRKWDTIDRFAIVAPAMAATMNENIALP
GNTIPHLKLTEQLVAQKQKELDKLQQIASQRHTTLTVINRQIDEQENRTQ
NLTNNIDNSFRQCAERLESCARAFN*
back to top