Gcaud6972.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud6972.t1
Unique NameGcaud6972.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length224
Homology
BLAST of Gcaud6972.t1 vs. uniprot
Match: A0A2V3ISP4_9FLOR (Beta-porphyranase B n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISP4_9FLOR)

HSP 1 Score: 311 bits (796), Expect = 3.010e-104
Identity = 147/216 (68.06%), Postives = 172/216 (79.63%), Query Frame = 0
Query:    3 GTFQRLETSASVNGRIPRACLRAHFGDLPKDAPQGYKQWGTGALVSQSRQLYGYFECRFRASDTAMVSRFMLIGKRKKKEMSVDVFSYSAQGENKRLVYMDAMFSAKDEEGQKIEATHPLKKIILDMPEHPVTVGIDWTPDHLKTYVDGHVIRHLENKYWHSPMHVGFFLETLPDRFGLPNEGQLKSRASMDIFYIRVWHRTKGDRQERTPGMKDE 218
            GT   L   ++V+    +A L      LP DAP GY+ W TGALVSQ +QLYGYFEC F+ASDTA+ SRFML+GKRKKK MSVDVFSYSA  ENK LV+MDA+F+ KDE+G+ +EA HPLKKIILDMP+HPVTVGIDWTPDHLKTYVDGHVIR+LENKYWHSPM +GFFLET+PDRFG+PNE QLK RA+M+I+Y+R W RT   RQER   +  E
Sbjct:   58 GTKPGLFVPSNVSVSDQKAWLTPKREMLPDDAPGGYEGWTTGALVSQYKQLYGYFECSFKASDTALASRFMLVGKRKKKRMSVDVFSYSAHEENKELVFMDALFATKDEDGKAVEAKHPLKKIILDMPDHPVTVGIDWTPDHLKTYVDGHVIRNLENKYWHSPMQIGFFLETIPDRFGVPNENQLKRRAAMEIYYVRTWQRTSSVRQERISSLDGE 273          
BLAST of Gcaud6972.t1 vs. uniprot
Match: A0A847G930_9BACT (Family 16 glycosylhydrolase n=1 Tax=Candidatus Hydrogenedens sp. TaxID=2654184 RepID=A0A847G930_9BACT)

HSP 1 Score: 96.7 bits (239), Expect = 2.190e-20
Identity = 65/214 (30.37%), Postives = 112/214 (52.34%), Query Frame = 0
Query:    3 GTFQRLETSASVNGRIPRACLRAHFGDLPKDA-PQGYK-QWGTGALVSQSRQLYGYFECRFRASDTAMVSRFMLIGKRKKKEMSVDVFSYSAQGE-NKRLVYMDA-MFSAKDEEGQKIEATHPLKKIILDMPEHPVT----VGIDWTPDHLKTYVDGHVIRHLENKYWHSPMHVGFFLETLPDRFGLPNEGQLKSRASMDIFYIRVWHRTKGDR 208
            G F+  E + SV+  I R  L A+  D PK   P+G   Q+ T A+ S+ + LYG+FE R +     + + F       ++   +DVF   A+ + N+R  +M   +F   +++  +  +  P      ++P  P        +DWTP+H++ YVDG ++R  EN++WH P+ + F +E +   FG+P  G+L   A  ++ Y+R W  T+GD+
Sbjct:   90 GRFE--EENVSVSKGILR--LAANALDTPKPGGPEGRDWQYATAAVQSRDKVLYGHFEVRAKVMAACICNAFWFYHATPERWTEIDVFEIGARAKGNERKAHMTVHVFHTPEDKTHRQWSQAP------ELPFDPAADFHVYSLDWTPEHIRYYVDGLLVREGENRHWHQPLTMNFDVEIMEQWFGMPAAGELP--AVYEVDYVRAW--TRGDK 289          
BLAST of Gcaud6972.t1 vs. uniprot
Match: A0A060RC77_9BACT (Endo-beta-1,3-glucanase n=1 Tax=Mucinivorans hirudinis TaxID=1433126 RepID=A0A060RC77_9BACT)

HSP 1 Score: 87.4 bits (215), Expect = 3.640e-17
Identity = 53/173 (30.64%), Postives = 84/173 (48.55%), Query Frame = 0
Query:   33 DAPQGYKQWGTGALVSQSRQLYGYFECRFRASDTAMVSRFMLIGKRKKKEMSVDVFSYSAQGENKRLVYMDAMFSAKDEEGQKIEATHPLKKIILDM----PEHPVTVGIDWTPDHLKTYVDGHVIRHLENKYWHSPMHVGFFLETLPDRFGLPNEGQLKSRASMDIFYIRVW 201
            +AP GY  + + A+ S+   LYG+FE R RA ++A+ S F L  +   K+  +D+F     G N    + D+++ A      K    H    +  +      +H +T G+ WT   +  YVDG  IR  +N +WHSP  + F  E  P+ +GLP++    +     I Y R W
Sbjct:   93 NAPAGYHTFTSAAVQSKDTVLYGFFEIRCRAMNSALSSAFWLYVQDSVKQEEIDIFEIC--GRNATNPWYDSIYFATSHYIIKSHNLHISDHVAHNQGVRYADHFITAGLLWTRAEIVWYVDGKEIRRRKNDFWHSPETINFDSEAFPEWWGLPSDDD--NGGEFQIEYFRYW 261          
BLAST of Gcaud6972.t1 vs. uniprot
Match: A0A356EPZ3_9PLAN (Glycoside hydrolase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A356EPZ3_9PLAN)

HSP 1 Score: 86.7 bits (213), Expect = 4.510e-17
Identity = 54/175 (30.86%), Postives = 93/175 (53.14%), Query Frame = 0
Query:   37 GYKQWGTGALVSQSRQLYGYFECRFRASDTAMVSRFML-IGKRKKKEMSVDVFSYSAQG---ENKRLVYMDAMFSAKDEEGQKIEATHPLKKIILDMPEHPVTVGIDWTPDHLKTYVDGHVIRHLENKYWHSPMHVGFFLETLPDRFGLPNEGQLKSRASMDIFYIRVWHRTKGD 207
            GYK + + AL S+SR  YGY+E + +  ++A  S F   +         +DVF    +    E+K  + +    +  ++E   +         + D  ++ +  G++W  D ++ YVDG ++R +EN +WH P+ + F  ET+PD FGLPN+  L S  S++  Y+R W +T+GD
Sbjct:   64 GYKDYTSAALHSKSRSSYGYYEVKAKPMNSAGSSSFWFQVEDVPGWRTEIDVFEIGGKAKGWEHKVNMNLHVFHTPTEKEHWSVGGAWKAPWRLAD--DYHI-YGLEWGKDEIRYYVDGVLVRSVENTHWHQPLFLIFDSETMPDWFGLPNDNDLPSTFSIE--YVRAW-KTQGD 232          
BLAST of Gcaud6972.t1 vs. uniprot
Match: D5ELT0_CORAD (Glycoside hydrolase family 16 n=1 Tax=Coraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193 / KCTC 12865 / 04OKA010-24) TaxID=583355 RepID=D5ELT0_CORAD)

HSP 1 Score: 88.2 bits (217), Expect = 1.320e-16
Identity = 57/190 (30.00%), Postives = 91/190 (47.89%), Query Frame = 0
Query:   38 YKQWGTGALVSQSRQLYGYFECRFRASDTAMVSRFMLIGKR------KKKEMSVDVFSYSAQGENKRLVYMDAMFSAKDEEGQKIEATHPLKKIILDMPEHPVTVGIDWTPDHLKTYVDGHVIRHLENKYWHSPMHVGFFLETLPDRFGLPNEGQLKSRASMDIFYIRVWHR--TKGDRQER-TPGMKDE 218
            YK + +G++VS  R  YGYFE R +  ++A  S +   G        K+  + +DVF    +   K   Y   +   K     K  +     K    +       G++WTP+ +K YVDG ++R ++N+ WH P ++ F  ET+ D  G+P +  L S   +D  Y+R W    T+ + QER TP  + E
Sbjct:  321 YKDYASGSIVSVDRVNYGYFEIRAKPMNSAGSSAWWFTGSSFDQATDKEARLEIDVFEIGGKAVGKEYSYNMNLHDFKSRNNPKHYSIGGTWKAERPLAGEFRVYGLEWTPELIKYYVDGVLVRRVKNERWHGPQYMVFDSETMFDWLGVPEDTDLPSTFEVD--YVRAWKNPETENNWQERYTPRQRAE 508          
BLAST of Gcaud6972.t1 vs. uniprot
Match: A0A7G9P342_9BACT (Family 16 glycosylhydrolase n=1 Tax=Planctomycetales bacterium zrk34 TaxID=2723666 RepID=A0A7G9P342_9BACT)

HSP 1 Score: 85.1 bits (209), Expect = 6.770e-16
Identity = 56/186 (30.11%), Postives = 86/186 (46.24%), Query Frame = 0
Query:   23 LRAHFGDLPKDAPQGYKQWGTGALVSQSRQLYGYFECRFRASDTAMVSRFMLIGKRKKKEMSVDVFSYSAQG-ENKRLVYMDAMFSAKDEEGQKIEATHPLKKIILDMPEHPV----TVGIDWTPDHLKTYVDGHVIRHLENKYWHSPMHVGFFLETLPDRFGLPNEGQLKSRASMDIFYIRVWHR 203
            L +    LP + P  YK +   A+ +++  LYGYFE R +  D+ + S F L          +D++       ++ R+V+ +        EG      H  K      P  P     T G++W+   ++ YVDG +IR +EN +WH P+ V    ET+PD FGLP    L     +D  Y+R W R
Sbjct:   82 LTSRAETLP-NLPAKYKDFTVAAVKTRAAVLYGYFEIRAQPGDSRISSSFWLNRIEPNHWTEIDIYEMGCGAPDHDRVVHTNVHVFKTPTEGDN----HWSKSKAWPAPFDPAAGMHTYGLEWSKAFIRWYVDGQMIRQIENTHWHQPLEVNINSETMPDWFGLPAPDDLPVTYRID--YVRSWAR 260          
BLAST of Gcaud6972.t1 vs. uniprot
Match: A0A5E8VAN4_9BRAD (Glycosyl hydrolase family protein n=1 Tax=Bradyrhizobium sp. LVM 105 TaxID=2341115 RepID=A0A5E8VAN4_9BRAD)

HSP 1 Score: 77.0 bits (188), Expect = 9.220e-14
Identity = 54/202 (26.73%), Postives = 83/202 (41.09%), Query Frame = 0
Query:    1 MGGTFQRLETSASVNGRIPRACLRAHFGDLPKD-APQGYKQWGTGALVSQSRQLYGYFECRFRASDTAMVSRFMLIGKRKKKEMSVDVFSYSAQGENKRLVYMDAMFSAKDEEGQKIEATHPLKKIILDMPEHPVTVGIDWTPDHLKTYVDGHVIRHLENKYWHSPMHVGFFLETLPDRFGLPNEGQLKSRASMDIFYIRVW 201
            M  +F   E  +  +G +   C      D P   A  GY +W TG + S S   YGYFE R R   +A +S F    K    +  +DVF +          Y   +   +         +    +   D        G++W    ++ +VDG ++R LEN+ WH PMH+ F  E      G+P +  + S   +D  Y+R W
Sbjct:    1 MKPSFFASENVSVADGSLNITC---QLRDPPAALASAGYGKWSTGIVKSLSTVQYGYFEVRARPMRSAALSSFWFYKKYADTQDEIDVFEFCKDRNGAVSNYHMTLHVYQLPGYTSDIISEAYWRAPFDFANEFHVFGLNWNRSRIEFFVDGVLVRRLENRLWHRPMHMIFDSEVHQKGCGIPEDATMPSTYKID--YVRSW 197          
BLAST of Gcaud6972.t1 vs. uniprot
Match: A0A1I2KM01_9FLAO (Glycosyl hydrolases family 16 n=1 Tax=Salegentibacter agarivorans TaxID=345907 RepID=A0A1I2KM01_9FLAO)

HSP 1 Score: 78.2 bits (191), Expect = 1.260e-13
Identity = 51/175 (29.14%), Postives = 81/175 (46.29%), Query Frame = 0
Query:   35 PQGYKQWGTGALVSQSRQLYGYFECRFRASDTAMVSRFMLIGKRKKKEMSVDV------FSYSAQGENKRLVYMDAMFSAKDEEGQKIEATHPLKKIIL--DMPEHPVTVGIDWTPDHLKTYVDGHVIRHLENKYWHSPMHVGFFLETLPDRFGLPNEGQLKSRASMDIFYIRVW 201
            P+GY    TG + S+S+ LYGYFE   +  D   VS F +    K     +D+        Y+    N  L     +F +  E+G   E     KK     ++ +     G++WTP+H++ Y+DG + R  EN +WH P+ V F  E+      LP++ +L       + Y R+W
Sbjct:  118 PEGYTH-STGFIKSKSKFLYGYFEAEAKLMDAPWVSGFWMTNVDKDWWTEIDICENAPGVKYNRHDLNSNL----HVFRSPPEQGDVKEHFSRTKKYYFPEELQKDYHVWGLEWTPEHIRFYIDGILFREAENTHWHQPLEVNFNCESNKWFGALPDDKRLD--GEYHVKYFRIW 285          
BLAST of Gcaud6972.t1 vs. uniprot
Match: A0A7X0H6D5_9BACT (Beta-glucanase (GH16 family) n=1 Tax=Algisphaera agarilytica TaxID=1385975 RepID=A0A7X0H6D5_9BACT)

HSP 1 Score: 75.5 bits (184), Expect = 3.190e-12
Identity = 49/170 (28.82%), Postives = 79/170 (46.47%), Query Frame = 0
Query:   38 YKQWGTGALVSQSRQLYGYFECRFRASDTAMVSRF-----MLIGKRKKKEMSVDVFSYSAQGENKRLVY-MDAMFSAKDEEGQKIEATHPLKKIILDMPEHPVTVGIDWTPDHLKTYVDGHVIRHLENKYWHSPMHVGFFLETLPDRFGLPNEGQLKSRASMDIFYIRVW 201
            Y+ + + ++ S    LYGYFE   +A D+A  S +     M   + K     +DVF    +       Y M+A      E+G+         K      +     G++WTP+H+K YV+G ++R + N +WH+P ++ F  ET+ +  G P    L S  S  I Y+R W
Sbjct:  327 YENYSSASVRSVEPVLYGYFEIESKAMDSAGSSAWWFSSSMRNAQGKTSRTEIDVFELGGKAIGHEYNYNMNAHIFETPEDGKNHWNKGGKWKAPFRFADDYHVFGLEWTPEHIKYYVNGVLVRRMPNTHWHTPQYMLFDSETMTNWLGWPEPEDLPSTFS--IRYVRAW 494          
BLAST of Gcaud6972.t1 vs. uniprot
Match: A0A5Q4H154_9PLAN (Glycosyl hydrolase family protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A5Q4H154_9PLAN)

HSP 1 Score: 73.6 bits (179), Expect = 6.500e-12
Identity = 53/173 (30.64%), Postives = 88/173 (50.87%), Query Frame = 0
Query:   37 GYKQWGTGALVSQSRQLYGYFECRFRASDTAMVSRFMLIGKRKKKEMS-VDVFSYSAQGEN-KRLVYMDA-MFSAKDEE-----GQKIEATHPLKKIILDMPEHPVTVGIDWTPDHLKTYVDGHVIRHLENKYWHSPMHVGFFLETLPDRFGLPNEGQLKSRASMDIFYIRVW 201
            GYK + + AL S+ R  YGY+E + +  ++A  S F    +     ++ +DVF    + +  +R V M+  +F    E+     G   EA   L        +     G+DW  D +K YVDG ++R +EN +WH  + + F  ET+P+ FG+P++  L S  S++  Y+R W
Sbjct:  129 GYKDYTSAALHSKIRSGYGYYEVKAKPMNSAGSSSFWFQVEDVPGWLTEIDVFEIGGKAKGFERKVNMNLHVFRTPTEKKHWSVGGAWEAPWRLA-------DDYHVYGLDWGKDEIKYYVDGVLVRSVENTHWHQALFLIFDSETMPEWFGMPDDDDLPSTFSVE--YVRAW 292          
The following BLAST results are available for this feature:
BLAST of Gcaud6972.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
A0A2V3ISP4_9FLOR3.010e-10468.06Beta-porphyranase B n=1 Tax=Gracilariopsis chorda ... [more]
A0A847G930_9BACT2.190e-2030.37Family 16 glycosylhydrolase n=1 Tax=Candidatus Hyd... [more]
A0A060RC77_9BACT3.640e-1730.64Endo-beta-1,3-glucanase n=1 Tax=Mucinivorans hirud... [more]
A0A356EPZ3_9PLAN4.510e-1730.86Glycoside hydrolase n=1 Tax=Planctomycetaceae bact... [more]
D5ELT0_CORAD1.320e-1630.00Glycoside hydrolase family 16 n=1 Tax=Coraliomarga... [more]
A0A7G9P342_9BACT6.770e-1630.11Family 16 glycosylhydrolase n=1 Tax=Planctomycetal... [more]
A0A5E8VAN4_9BRAD9.220e-1426.73Glycosyl hydrolase family protein n=1 Tax=Bradyrhi... [more]
A0A1I2KM01_9FLAO1.260e-1329.14Glycosyl hydrolases family 16 n=1 Tax=Salegentibac... [more]
A0A7X0H6D5_9BACT3.190e-1228.82Beta-glucanase (GH16 family) n=1 Tax=Algisphaera a... [more]
A0A5Q4H154_9PLAN6.500e-1230.64Glycosyl hydrolase family protein n=1 Tax=Planctom... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000757Glycoside hydrolase family 16PFAMPF00722Glyco_hydro_16coord: 40..160
e-value: 1.5E-7
score: 31.1
NoneNo IPR availableGENE3D2.60.120.200coord: 10..205
e-value: 2.4E-20
score: 75.2
IPR013320Concanavalin A-like lectin/glucanase domain superfamilySUPERFAMILY49899Concanavalin A-like lectins/glucanasescoord: 36..201

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_99_length_51659_cov_4.484680contigNODE_99_length_51659_cov_4.484680:42176..43230 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud6972.t1Gcaud6972.t1Gracilaria caudata M_176_S67 malemRNANODE_99_length_51659_cov_4.484680 42176..43230 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud6972.t1 ID=Gcaud6972.t1|Name=Gcaud6972.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=224bp
MGGTFQRLETSASVNGRIPRACLRAHFGDLPKDAPQGYKQWGTGALVSQS
RQLYGYFECRFRASDTAMVSRFMLIGKRKKKEMSVDVFSYSAQGENKRLV
YMDAMFSAKDEEGQKIEATHPLKKIILDMPEHPVTVGIDWTPDHLKTYVD
GHVIRHLENKYWHSPMHVGFFLETLPDRFGLPNEGQLKSRASMDIFYIRV
WHRTKGDRQERTPGMKDEPEAKV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000757GH16
IPR013320ConA-like_dom_sf