Gcaud8738.t1 (polypeptide) Gracilaria caudata M_176_S67 male
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Overview
Homology
BLAST of Gcaud8738.t1 vs. uniprot
Match: A0A2V3IQR5_9FLOR (Collagen alpha-5(VI) chain n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQR5_9FLOR) HSP 1 Score: 110 bits (274), Expect = 6.990e-26 Identity = 68/203 (33.50%), Postives = 105/203 (51.72%), Query Frame = 0
Query: 26 GVVARSELRAASNFVRYRGCSINICFAIDGSGSMNHSEFDMQKNFIMDMVSIISYDNNASYAAVQYGESAYPILSLTDDEQEFIWHVSSTPFQGDSRTSIAAGIEYCFFELSSAPSAVSKIVLVGDGRHNAGR-----DPVEWARFFKSYFGHGGSLSAVSVGINDNQYMEDIAAAGGGHAFAIDDFVELSYVIEDIIFDVCG 223
G +E++ A C NICFA+DGSGSM+ +EF ++K+F + ++++YD A +AAVQYG I LT+D F+ V T RT IA G+ C + IVL+GDGR N DPV A+ F + ++SAV VG + + M A G + F + ++E++ V+ +++ +VCG
Sbjct: 38 GTANEAEVQLALQIAEKTRCDPNICFAVDGSGSMDVTEFQLEKDFTNLVAAVVAYDEQARFAAVQYGLRPKFISRLTEDADAFLEAVHYTESLNAPRTFIAPGLAGCIRQFYYLKGEPKHIVLLGDGRSNFDSKLPPLDPVSIAQAFLA--NPNNTISAVGVGFDADDTMLTNIAGGEENVFNVGQWLEVTTVLAELVGEVCG 238
BLAST of Gcaud8738.t1 vs. uniprot
Match: A0A672NVY9_SINGR (Integrin alpha-L-like n=2 Tax=Sinocyclocheilus grahami TaxID=75366 RepID=A0A672NVY9_SINGR) HSP 1 Score: 61.6 bits (148), Expect = 2.040e-7 Identity = 38/126 (30.16%), Postives = 61/126 (48.41%), Query Frame = 0
Query: 31 SELRAASNF-VRYRGCS---INICFAIDGSGSMNHSEFDMQKNFIMDMVSIISYDNNASYAAVQYGESAYPILSLTDDEQEFIWHVSSTPFQGDSRTSIAAGIEYCFFELSSAPSAVSKIVLVGDG 152
S L+A SNF + Y+ C+ +N+ F DGS SM EFDM KNFI D++ +S +++ +AAVQ+ + D + + T+ I Y + P+A +V++ DG
Sbjct: 111 SSLQAVSNFTIAYQECTKREVNLVFLFDGSASMKTREFDMNKNFIKDVMKKLS-NSSIKFAAVQFSSEIRTVFDFNDYQNGSAEEKLMKEKHMKTLTNTYRAINYVLVSSGADPNAQKALVIITDG 235
BLAST of Gcaud8738.t1 vs. uniprot
Match: UPI00101DF135 (VWA domain-containing protein n=2 Tax=unclassified Candidatus Chloroploca TaxID=2685712 RepID=UPI00101DF135) HSP 1 Score: 61.2 bits (147), Expect = 2.860e-7 Identity = 48/178 (26.97%), Postives = 86/178 (48.31%), Query Frame = 0
Query: 47 INICFAIDGSGSMNHSEFDMQKNFIMDMVSIISYD-NNASYAAVQYGESA---YPILSLTDDEQEFIWHVSSTPFQGDSRTSIAAGIEYCFFELSSAPSA--VSKIVLVGDGRHNAGRDPVEWARFFKSYFGHGGSLSAVSVGINDNQYMEDIAAAGGGHAFAIDDFVELSYVIEDII 218
+++ +DGSGS++ + F ++F+ ++V+ + ++A Q+G Y L L DD + V++ Q D T I G++ EL++ A ++L+ DG HN G DPVE A+ + H L A++VG N + A F++ +F LS ++ I+
Sbjct: 207 LDLMLVLDGSGSISSTNFRQMRDFVRNLVNSYTVSPDDARVGIAQFGTQGRGRYE-LRLADDPSVVLARVNAMT-QLDGYTDIQEGLQLGREELAANGRAGVPQVMILLTDGAHNQGGDPVEEAQLVRDAGMH---LFAIAVGSGPNLPQLNALTADPDRVFSVSNFASLSTILSQIV 379
BLAST of Gcaud8738.t1 vs. uniprot
Match: A0A498NLN7_LABRO (Integrin alpha-L-like protein n=1 Tax=Labeo rohita TaxID=84645 RepID=A0A498NLN7_LABRO) HSP 1 Score: 58.2 bits (139), Expect = 3.150e-6 Identity = 40/132 (30.30%), Postives = 63/132 (47.73%), Query Frame = 0
Query: 31 SELRAASNF-VRYRGCS---INICFAIDGSGSMNHSEFDMQKNFIMDMVSIISYDNNASYAAVQYGESAYPILSLTDDEQEFIWHVSSTPFQGDSRTSIAAGIEYCFFEL------SSAPSAVSKIVLVGDG 152
S L+A SNF V Y+ C+ +N+ F DGS SM EF M K+FI +++ +S D++ +AAVQ+ + D + F S T+ I Y L ++P+A +V++ DG
Sbjct: 26 SSLQAISNFTVAYQECTKREVNVVFLFDGSSSMRTHEFQMNKDFIKNVMKELS-DSSIKFAAVQFSSDLRTVFDFNDYQNGFAEEKLMKERHMKSLTNTYRAINYVLKNLLNNVSSGASPNAQKALVIITDG 156
BLAST of Gcaud8738.t1 vs. uniprot
Match: A0A1X7VFU3_AMPQE (Uncharacterized protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7VFU3_AMPQE) HSP 1 Score: 58.2 bits (139), Expect = 3.400e-6 Identity = 45/181 (24.86%), Postives = 86/181 (47.51%), Query Frame = 0
Query: 47 INICFAIDGSGSMNHSEFDMQKNFIMDMVSIISYDNNASYAAVQYGESAYPILSLTD-DEQEFIWHVSSTPFQGDSRTSIAAGIEYCF--FELSSAPSAVSKIVLVGDGRHNAGRDPVEWARFFKSYFGHGGSLSAVSVGINDNQYMEDIAAAGGGHAFAIDDFVELSY--VIEDIIFDVC 222
++ F +D S S+ ++F++QK F+ ++V + A++ V++ SA ++ L +E I +++ P+Q S T+ AAGI F L+ ++++ DG N D E + ++ G + A+ VG N N+ A F + +F S+ ++ DI+ D C
Sbjct: 952 MDFMFVVDSSSSITPTDFNVQKEFLTEIVKQYNSSETANFGLVRFSSSASVVIGLASVSGEELISAINAVPYQPGS-TNTAAGIRLAMQQFLLNRRSQVPQVMIVLTDGASN---DFDETVKAAQASHQSGIEIFAIGVGQNANEDELKEIATSEKKVFNVAEFKRESFGAILSDIVRDTC 1128 The following BLAST results are available for this feature:
BLAST of Gcaud8738.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 5
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gcaud8738.t1 ID=Gcaud8738.t1|Name=Gcaud8738.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=228bpback to top |