Gcaud2482.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2482.t1
Unique NameGcaud2482.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length539
Homology
BLAST of Gcaud2482.t1 vs. uniprot
Match: A0A2V3IE90_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IE90_9FLOR)

HSP 1 Score: 120 bits (301), Expect = 6.080e-25
Identity = 106/410 (25.85%), Postives = 172/410 (41.95%), Query Frame = 0
Query:  224 SQLRRSSFLQIVPILTRGEQKRKAAVDYVLGILVFDNL----RTVREIIDGKVREPDIQHLCHGQIDAIEEYLKFSYLK-HIGSGQDVLHCPKIALETALGTDQNRQGSRDPLRSTCRQCMMSFQVI---------ENED-----------IQQFY--------------------------------------FRPIQWTLTKGELLT-----------------------------IPRVFFTDVG--------VGVCCTLDAILARTKAELSSLKSFYLLSDNAKCYQNDLIPVLAPFISKSHSLFMTGFVHFETQREKSLVHAQFALDMRHINRYGDQTRNDVTTLADIVMAQNRFGGVANCTAEMAHVRRNFTNMCNW--IKSQKEGRLAKCGRFNEVVYGEWNN 531
            S + R++F Q+   L   E KRK+AVDYV+G LV D++    R VR    G+ ++  +++     I+ ++ +LK  +++ HIG   D  H    AL    G    +     P+  TCR C+  F ++         E +D            Q+++                                      F PI++     E                                +  +F+  +         V V   L+A   R + +L  +    L+SDNA CYQN L+P++APF++K + L M  F+H ETQ  KSL  A FA+ M+H++ Y  +  +DVTT + +V A    GG++N +AE+  + R   N+  W  + +     L   GR NE VY  W++
Sbjct:  220 SSVGRTTFFQVADTLMTRESKRKSAVDYVIGALVNDSVLILNRIVRAFSTGQTQKKMLEN-----IERVQHFLKGVFVETHIGKDNDGYHDSSHALSDGFGPTGAQLIQTVPV--TCRGCLKPFALLNQIQAIVPTERKDASNAVDRCSRCFQEYFAHLHRVKMQQRAIEKITTDIVEHKLHNRAVLLADYKMKFEPIRFREKTVEFFGKRGISWHGLVVFYLEKQYDSNGEYNGPGHLSMLFYDHIVHGDSRQDVVAVASILEAGCMRIRKDLPVVNEVVLVSDNAGCYQNSLLPIIAPFVAKQNGLSMVQFIHSETQDGKSLFDAHFAIAMKHVSDYVAEG-HDVTTPSGLVTALRANGGLSNSSAELVRIYRAHPNLAGWEALHASDNNGLPWIGRNNEYVYKGWSD 621          
BLAST of Gcaud2482.t1 vs. uniprot
Match: A0A2V3IQV5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQV5_9FLOR)

HSP 1 Score: 90.9 bits (224), Expect = 2.190e-16
Identity = 56/143 (39.16%), Postives = 85/143 (59.44%), Query Frame = 0
Query:  392 RTKAELSSLKSFYLLSDNAKCYQNDLIPVLAPFISKSHSLFMTGFVH-FETQREKSLVHAQFALDMRHINRYGDQTRNDVTTLADIVMAQNRFGGVANCTAEMAHVRRNFTNMCNW--IKSQKEGRLAKCGRFNEVVYGEWNN 531
            R + +L  +    L+SDNA CYQN L+P++APF++K  +L+  G VH  ETQ  KSL  A FA+ M+H++ Y  +  +DVTT + +V A    GG++N +AE+  VR   +N+  W  + +     L   GR NE VY  W++
Sbjct:    2 RIRKDLPVVNEVVLVSDNAGCYQNSLLPIIAPFVAKERALY--GTVHPSETQDGKSLFDAHFAIAMKHVSDYVAEG-HDVTTPSGLVTALRANGGLSNSSAEL--VRIYSSNLAGWEALHASDNNGLPWIGRNNEYVYKGWSD 139          
BLAST of Gcaud2482.t1 vs. uniprot
Match: E9H5Y2_DAPPU (Uncharacterized protein n=1 Tax=Daphnia pulex TaxID=6669 RepID=E9H5Y2_DAPPU)

HSP 1 Score: 91.3 bits (225), Expect = 8.750e-16
Identity = 54/146 (36.99%), Postives = 81/146 (55.48%), Query Frame = 0
Query:  382 VCCTLDAILARTKAELSSLKSFYLLSDNAKCYQNDLIPVLAPFISKSHSLFMTGFVHFETQREKSLVHAQFALDMRHINRYGDQTRNDVTTLADIVMAQNRFGGVANCTAEMAHVRRNFTNMCNWIKSQKEGRLAK-CGRFNEVVY 526
            V   L+AIL R K+ L  LK+ YL SDNA CYQN L+  + P +S  H + +  F+H ETQ  KS++ A FA   + +  +  +  NDV T   +V A   +GG+ NC AE+  ++R   NM     S  E ++ +  GR N++ +
Sbjct:   64 VFAVLEAILMRLKSILPHLKTVYLQSDNAGCYQNTLMVFILPHLSHVHGVCIRRFIHTETQDGKSVLDAHFARSSQIVYDFCKEG-NDVVTPTQLVTALKSYGGLENCVAELISLKRERLNMLRQACSSLEKKVKRFIGRTNDIQF 208          
BLAST of Gcaud2482.t1 vs. uniprot
Match: E9GUI1_DAPPU (Uncharacterized protein n=1 Tax=Daphnia pulex TaxID=6669 RepID=E9GUI1_DAPPU)

HSP 1 Score: 87.4 bits (215), Expect = 5.620e-15
Identity = 54/145 (37.24%), Postives = 77/145 (53.10%), Query Frame = 0
Query:  382 VCCTLDAILARTKAELSSLKSFYLLSDNAKCYQNDLIPVLAPFISKSHSLFMTGFVHFETQREKSLVHAQFALDMRHINRYGDQTRNDVTTLADIVMAQNRFGGVANCTAEMAHVRRNFTNMCNWIKSQKEGRLAKCGRFNEVVY 526
            V   L+AIL R KA L  LK+ YL SDNA CYQN L+  + P +S  H + +  F+H ETQ  KS++ A FA   + ++    +  NDV T   +V A   +GG+ NC AE+  ++    NM     S  E ++    RFN   +
Sbjct:   32 VFSVLEAILMRLKAILPHLKTVYLQSDNAGCYQNTLMVFILPHLSYVHGVCIRRFIHTETQDGKSVLDAHFARSSQIVDDLSKEG-NDVVTPTQLVTALKSYGGLENCVAELISLKSGRLNMLRQACSSLEKKVK---RFNSDTF 172          
BLAST of Gcaud2482.t1 vs. uniprot
Match: A0A8J2S0X1_9CRUS (Hypothetical protein n=1 Tax=Daphnia galeata TaxID=27404 RepID=A0A8J2S0X1_9CRUS)

HSP 1 Score: 82.4 bits (202), Expect = 1.090e-12
Identity = 44/118 (37.29%), Postives = 71/118 (60.17%), Query Frame = 0
Query:  382 VCCTLDAILARTKAELSSLKSFYLLSDNAKCYQNDLIPVLAPFISKSHSLFMTGFVHFETQREKSLVHAQFALDMRHINRYGDQTRNDVTTLADIVMAQNRFGGVANCTAEMAHVRRN 499
            V   L+A+L R K  L ++K+ YL SDNA CYQN  +  + P +S  H +++  F+H ETQ  KS++ A FA   + +  Y  +  +DV T +++V A   +GG+ NCT E+  ++R+
Sbjct:  563 VFAVLEAVLMRIKEILPNVKTVYLQSDNAGCYQNSSMLFILPHLSYVHGIYVRRFIHTETQDGKSVLDAHFARSSQIVYDYCKEG-HDVVTPSNLVTALKSYGGLENCTVELISLKRD 679          
The following BLAST results are available for this feature:
BLAST of Gcaud2482.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3IE90_9FLOR6.080e-2525.85Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IQV5_9FLOR2.190e-1639.16Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
E9H5Y2_DAPPU8.750e-1636.99Uncharacterized protein n=1 Tax=Daphnia pulex TaxI... [more]
E9GUI1_DAPPU5.620e-1537.24Uncharacterized protein n=1 Tax=Daphnia pulex TaxI... [more]
A0A8J2S0X1_9CRUS1.090e-1237.29Hypothetical protein n=1 Tax=Daphnia galeata TaxID... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 164..190

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_986_length_15474_cov_4.763960contigNODE_986_length_15474_cov_4.763960:1188..3239 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2482.t1Gcaud2482.t1Gracilaria caudata M_176_S67 malemRNANODE_986_length_15474_cov_4.763960 1188..3239 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2482.t1 ID=Gcaud2482.t1|Name=Gcaud2482.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=539bp
MRGAVVDGKRASRKRSIERRVLRGLLCTTSTAKEVQVLVNEGHQYVSSPT
ATEEEEIEGIEKQLSNINALEEAKSAPENASLERLIPVQPDVVQSNNENE
YKCNIMNCVIDSPGSSGTATGHNCSSCNRGVHLICCIRVLRIEVTDENTA
LYCSSGYESNTQISGENTQRQSSIVGEKRRGSEGTAPSKAEKGIWSGSSA
TLFEEARKDWNFLLSNGTIPGAISQLRRSSFLQIVPILTRGEQKRKAAVD
YVLGILVFDNLRTVREIIDGKVREPDIQHLCHGQIDAIEEYLKFSYLKHI
GSGQDVLHCPKIALETALGTDQNRQGSRDPLRSTCRQCMMSFQVIENEDI
QQFYFRPIQWTLTKGELLTIPRVFFTDVGVGVCCTLDAILARTKAELSSL
KSFYLLSDNAKCYQNDLIPVLAPFISKSHSLFMTGFVHFETQREKSLVHA
QFALDMRHINRYGDQTRNDVTTLADIVMAQNRFGGVANCTAEMAHVRRNF
TNMCNWIKSQKEGRLAKCGRFNEVVYGEWNNNELEAKC*
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