Gcaud7713.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7713.t1
Unique NameGcaud7713.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length179
Homology
The following BLAST results are available for this feature:
BLAST of Gcaud7713.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010998Integrase/recombinase, N-terminalGENE3D1.10.150.130coord: 59..172
e-value: 5.3E-9
score: 38.0
NoneNo IPR availableSUPERFAMILY47823lambda integrase-like, N-terminal domaincoord: 79..149

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_982_length_15525_cov_4.305624contigNODE_982_length_15525_cov_4.305624:2791..3327 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7713.t1Gcaud7713.t1Gracilaria caudata M_176_S67 malemRNANODE_982_length_15525_cov_4.305624 2791..3327 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7713.t1 ID=Gcaud7713.t1|Name=Gcaud7713.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=179bp
MAPAGMVLGATSDGVEGYRAPQHIARNLGCSENNQLELESITAGDEHMRM
EVLAASRLRRGQTSSTVINRSARLLEDFGWSTRTGCSRDTQWPTYLDFCA
TDSWDPLPITEAHLAAYIDWITEEREAGRRNISPSSLRQYISAIRQRQST
VLRIEVLPFPFIAHLLRAYQGWKEATHP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010998Integrase_recombinase_N