Gcaud741.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud741.t1
Unique NameGcaud741.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length209
Homology
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BLAST of Gcaud741.t1 vs. uniprot
Match: R7QF04_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QF04_CHOCR)

HSP 1 Score: 161 bits (408), Expect = 1.600e-46
Identity = 97/205 (47.32%), Postives = 132/205 (64.39%), Query Frame = 0 
Query:    4 AKAVNAVAAPSFNIL-RSIAALRPHITPVSRLASLDITRTHLSIALSDETQHQAVPFGILARTGLPSADAKILSSAFSRMP--EQHSQSQNIHALIVGVSPIEPD---TSISYTSDLLQHVDFLPNLNAILFYSEAHALQHAIHSQHDVLNALKLIPQNLETRKQKRFARAMNPRISELDLANSVQSRAQLSPTDILQAVLRDLN 202
            A AV+A  AP   ++ RS+ +LR  +TP SRLASLDIT TH+S+A+S+  +  A PFG+LART  PSADA ILS A +          + ++HAL+VG+ P       T + Y ++LLQ    LP+L A+LFYSEAHAL  A+ +  D L+AL  +P  LETRK  RF  AMNP++    L   + S+A+++ TD+LQAVL DLN
Sbjct:    3 AAAVSASRAPLQQLVHRSLPSLRHTLTPNSRLASLDITPTHVSLAISNRLRDTAFPFGMLARTSKPSADALILSHALAHAEAVSDPPAALDVHALVVGLPPASESSASTLVPYLAELLQEEALLPDLQAVLFYSEAHALSAALRAHSDFLDALAELPVRLETRKLHRFDAAMNPKVPREQLEQGLDSKARIAATDVLQAVLDDLN 207
The following BLAST results are available for this feature:
BLAST of Gcaud741.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
R7QF04_CHOCR1.600e-4647.32Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_978_length_15578_cov_4.427843contigNODE_978_length_15578_cov_4.427843:9911..10537 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud741.t1Gcaud741.t1Gracilaria caudata M_176_S67 malemRNANODE_978_length_15578_cov_4.427843 9911..10537 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud741.t1 ID=Gcaud741.t1|Name=Gcaud741.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=209bp
MAAAKAVNAVAAPSFNILRSIAALRPHITPVSRLASLDITRTHLSIALSD
ETQHQAVPFGILARTGLPSADAKILSSAFSRMPEQHSQSQNIHALIVGVS
PIEPDTSISYTSDLLQHVDFLPNLNAILFYSEAHALQHAIHSQHDVLNAL
KLIPQNLETRKQKRFARAMNPRISELDLANSVQSRAQLSPTDILQAVLRD
LNNVEHKQ*
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