Gcaud8745.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8745.t1
Unique NameGcaud8745.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length198
Homology
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BLAST of Gcaud8745.t1 vs. uniprot
Match: A0A2V3IM30_9FLOR (Protein with SprT-like domain at the N terminus n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IM30_9FLOR)

HSP 1 Score: 75.5 bits (184), Expect = 1.880e-12
Identity = 34/76 (44.74%), Postives = 53/76 (69.74%), Query Frame = 0 
Query:    2 LRPLIEPEKPIDLEQKAISKLKEYFGDHGSEKPFSFYEAAKMLKMEQTKLLESIRKGSTITEDGDLLIGREARELL 77
            L  +++ E P++ E++A +KL    G   S +PFSF+ AAK LKM+Q +L ESIR+ + +TE+GD+ + R+A ELL
Sbjct:  434 LESILKEEGPVEWEKRAKAKLSALLGFQDSNEPFSFFSAAKQLKMQQAQLFESIRRDAVVTEEGDMYLSRKAEELL 509
The following BLAST results are available for this feature:
BLAST of Gcaud8745.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IM30_9FLOR1.880e-1244.74Protein with SprT-like domain at the N terminus n=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 147..198
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 78..122
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 151..177
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 86..121

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_9638_length_608_cov_4.920696contigNODE_9638_length_608_cov_4.920696:2..593 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8745.t1Gcaud8745.t1Gracilaria caudata M_176_S67 malemRNANODE_9638_length_608_cov_4.920696 2..593 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8745.t1 ID=Gcaud8745.t1|Name=Gcaud8745.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=198bp
MLRPLIEPEKPIDLEQKAISKLKEYFGDHGSEKPFSFYEAAKMLKMEQTK
LLESIRKGSTITEDGDLLIGREARELLDPCRSRSDQGQEQRVNIQERESL
PPTTPSEPEVRSKSRSTLATRRCPLCDQPIPKALFDEHLRNCLEESNISS
ALMDRENEDEKISVYGKDRRRMKGRESKTFTGPSNRKGGGGAGVPASX
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