Gcaud1856.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1856.t1
Unique NameGcaud1856.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length196
Homology
BLAST of Gcaud1856.t1 vs. uniprot
Match: A0A2V3IG95_9FLOR (COP9 signalosome complex subunit 8 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IG95_9FLOR)

HSP 1 Score: 251 bits (640), Expect = 3.580e-82
Identity = 130/195 (66.67%), Postives = 158/195 (81.03%), Query Frame = 0
Query:    1 MSIITAAAEALDVARVVELCEDAELTAAEKNDVHPFPAFHLLGLLLQEDLNEARFLWKRLPPLCQENTETKAAWKLAQALWKRDNSEFFQAAERRHWSQEAGHLVQELVRRKKEAAKQLVERSYSCISLQRASALLGLDQPALLQLCQSEEWVVEDNFILIAKVKTNRKIPNHAAVQQSELQVLTEQLIKLQTTS 195
            MS I AA EALD++ +  LCE+AELTAAE N+VHPFP FH+L  LL  DL+EARFLWKRLPP C+ + ET+AAW LAQALW+RD+  FF+AAE++ WS+EAGHLV+ELVR+K+EAA + VER YS IS++RA A LGL+   L+ LCQ +EWV+ED FILI  VK NR   N+AAVQQSELQ+LTEQLIKLQTTS
Sbjct:    1 MSKIVAAVEALDISLLTRLCEEAELTAAENNEVHPFPTFHILSALLDADLSEARFLWKRLPPQCKADAETRAAWALAQALWQRDSRGFFEAAEQQ-WSKEAGHLVKELVRQKREAAIRHVERGYSRISMERAGATLGLNHSGLVDLCQRQEWVIEDGFILINNVKHNRDADNYAAVQQSELQMLTEQLIKLQTTS 194          
BLAST of Gcaud1856.t1 vs. uniprot
Match: A0A6J1WPI6_GALME (COP9 signalosome complex subunit 8 n=1 Tax=Galleria mellonella TaxID=7137 RepID=A0A6J1WPI6_GALME)

HSP 1 Score: 89.7 bits (221), Expect = 4.860e-19
Identity = 57/173 (32.95%), Postives = 88/173 (50.87%), Query Frame = 0
Query:   18 ELCEDAELTAAEKND--VHPFPAFHLLGLLL-QEDLNEARFLWKRLPP-LCQENTETKAAWKLAQALWKRDNSEFFQAAERRHWSQEAGHLVQELVRRKKEAAKQLVERSYSCISLQRASALLGLDQPALLQLCQSEEWVVEDNFILIAKVKTNRKIPNHAAVQQSELQVLTE 186
            +LC + E    E  +    P     LL + L Q DL  A+FLWKR+P  +   N E  A W + Q LWK+D    +QA     W++   ++++ L  + +E A  L+ RSYS ISL    A+ GL + A+L LC+  +W + ++ I I      +  P H +  + +L  LTE
Sbjct:    7 KLCGELEKQELEAPNGVASPTTYSQLLAIYLYQNDLCNAKFLWKRIPQNVTSSNPEIAAVWAIGQMLWKKDLPGTYQALAAYDWTEPVANIIRALEEKVRERAFNLIGRSYSSISLDTVVAMTGLSRDAVLHLCRDRKWTLNEDNITIQPTPPTQPAPLHTS-SEDQLFKLTE 178          
BLAST of Gcaud1856.t1 vs. uniprot
Match: UPI00067E54CD (COP9 signalosome complex subunit 8 n=1 Tax=Amyelois transitella TaxID=680683 RepID=UPI00067E54CD)

HSP 1 Score: 87.4 bits (215), Expect = 3.730e-18
Identity = 54/172 (31.40%), Postives = 90/172 (52.33%), Query Frame = 0
Query:   19 LCEDAELTAAEKNDVHPFPAFH--LLGLLL-QEDLNEARFLWKRLPP-LCQENTETKAAWKLAQALWKRDNSEFFQAAERRHWSQEAGHLVQELVRRKKEAAKQLVERSYSCISLQRASALLGLDQPALLQLCQSEEWVVEDNFILIAKVKTNRKIPNHAAVQQSELQVLTE 186
            LC + E    E  +    P  +  LL + L Q DL  A+FLWKR+PP +   N E  A W + Q LWK+D +  +QA     W++   ++++ L  + +E A  L+ +SYS IS+    A+ GL + A+LQ C+  +W + ++ + +      +  P H +  + +L  LTE
Sbjct:    8 LCGELEKNELEAPNGIASPTTYGQLLAIYLYQNDLCNAKFLWKRIPPNILSSNPEIPAIWAVGQKLWKKDLAGTYQALAAFTWTEPVSNIIRALEEKVRERAFNLIGQSYSSISIDTVIAMTGLSKEAVLQACRDRKWELAEDGVTVNPTPPTQPAPLHTS-SEDQLFKLTE 178          
BLAST of Gcaud1856.t1 vs. uniprot
Match: A0A194PKA5_PAPXU (COP9 signalosome complex subunit 8 n=4 Tax=Papilio TaxID=7145 RepID=A0A194PKA5_PAPXU)

HSP 1 Score: 87.0 bits (214), Expect = 5.230e-18
Identity = 55/172 (31.98%), Postives = 88/172 (51.16%), Query Frame = 0
Query:   19 LCEDAELTAAEKND--VHPFPAFHLLGLLL-QEDLNEARFLWKRLPP-LCQENTETKAAWKLAQALWKRDNSEFFQAAERRHWSQEAGHLVQELVRRKKEAAKQLVERSYSCISLQRASALLGLDQPALLQLCQSEEWVVEDNFILIAKVKTNRKIPNHAAVQQSELQVLTE 186
            LC + E    E  +    P     LL + L Q DL  A+FLWKR+PP +   N E  A W + Q LWK+D +  +QA    +W++   ++++ L  R +E A  L+ RSYS IS     ++ GL   A+ Q+C+  +W + ++   I  +   +  P H +  + +L  LTE
Sbjct:    8 LCSELEKQELEAPNGVASPTTYAQLLAIYLYQNDLCNAKFLWKRIPPNIISSNPEIAAIWTVGQKLWKKDLAGTYQALAIYNWTEPISNIIRALEERVRERALNLIGRSYSSISHNTLVSMTGLSNEAIAQICKERKWELSEDGTTIKPIPPVQPTPLHTS-SEDQLFKLTE 178          
BLAST of Gcaud1856.t1 vs. uniprot
Match: A0A3S2LC84_CHISP (COP9 signalosome complex subunit 8 n=2 Tax=Crambidae TaxID=268499 RepID=A0A3S2LC84_CHISP)

HSP 1 Score: 87.0 bits (214), Expect = 5.350e-18
Identity = 55/174 (31.61%), Postives = 92/174 (52.87%), Query Frame = 0
Query:   18 ELCEDAELTAAEKNDVHPFPAFH--LLGLLL-QEDLNEARFLWKRLPP-LCQENTETKAAWKLAQALWKRDNSEFFQAAERRHWSQ-EAGHLVQELVRRKKEAAKQLVERSYSCISLQRASALLGLDQPALLQLCQSEEWVVEDNFILIAKVKTNRKIPNHAAVQQSELQVLTE 186
            +LC + E    E       P+ +  LL + L Q DL  A+FLWKR+P  +   NTE  A W + Q LWK+D +  + A    +WS+ E  ++++ L  + +E A  L+  SYS ISL    ++ GL + A+L  C+  +W ++D+ + +  V   +  P H +  + +L  LT+
Sbjct:    7 KLCTELEKQELEAPTGVASPSTYAQLLAIYLYQNDLCNAKFLWKRIPQNITSSNTELGAIWAIGQKLWKKDLAGMYHAIAAYNWSEPEVANIIRALEEKVRERAFNLIGSSYSSISLDTVVSMTGLSREAVLHACRDRKWAIKDDGVTVNPVPPTQPAPLHTS-SEDQLFKLTD 179          
BLAST of Gcaud1856.t1 vs. uniprot
Match: A0A212EHT9_DANPL (COP9 protein n=2 Tax=Danaus TaxID=13036 RepID=A0A212EHT9_DANPL)

HSP 1 Score: 86.3 bits (212), Expect = 1.030e-17
Identity = 55/173 (31.79%), Postives = 90/173 (52.02%), Query Frame = 0
Query:   18 ELCEDAELTAAEK-NDVHPFPAF-HLLGLLL-QEDLNEARFLWKRLPP-LCQENTETKAAWKLAQALWKRDNSEFFQAAERRHWSQEAGHLVQELVRRKKEAAKQLVERSYSCISLQRASALLGLDQPALLQLCQSEEWVVEDNFILIAKVKTNRKIPNHAAVQQSELQVLTE 186
            +LC D E    E  N +     +  LL + L Q DL  A++LWKR+P  +   N E  A W + Q LWK+D +  + A     W++   H+++ L  R +E A  L+ RSYS +SL     + GL + A+LQ+C+ ++W +  + + I+     +  P H +  + +L  LTE
Sbjct:    7 KLCGDLEKQELEAPNGIASSSTYAQLLAIYLYQNDLCNAKYLWKRIPQSITSSNPEIPAIWAVGQKLWKKDLAGTYHALAAFTWTEPVAHIIRALEERVRERAFNLIGRSYSTVSLDTIVLMTGLSREAVLQICRDKKWELHSDGVTISPTPPVQPSPLHTS-SEDQLFKLTE 178          
BLAST of Gcaud1856.t1 vs. uniprot
Match: A0A8B8HUL5_9NEOP (COP9 signalosome complex subunit 8 n=3 Tax=Nymphalinae TaxID=40040 RepID=A0A8B8HUL5_9NEOP)

HSP 1 Score: 86.3 bits (212), Expect = 1.030e-17
Identity = 55/173 (31.79%), Postives = 89/173 (51.45%), Query Frame = 0
Query:   18 ELCEDAELTAAEK-NDVHPFPAF-HLLGLLL-QEDLNEARFLWKRLPP-LCQENTETKAAWKLAQALWKRDNSEFFQAAERRHWSQEAGHLVQELVRRKKEAAKQLVERSYSCISLQRASALLGLDQPALLQLCQSEEWVVEDNFILIAKVKTNRKIPNHAAVQQSELQVLTE 186
            +LC + E    E  N V     +  LL + L Q DL  A+FLWKR+P  +   N E  A W + Q LWK+D +  + A     W++   ++++ L  + +E A  LV RSYS IS+     + GL + A+LQ+C+  +W +  + + I     ++  P H +  + +L  LTE
Sbjct:    7 KLCTELEKQELEATNGVASIATYAQLLAIYLYQNDLCNAKFLWKRIPQNITSSNPELMAIWAIGQKLWKKDLAATYHALSAYTWTEPVANIIRALEEKVRERAFNLVGRSYSSISMDTVVLMTGLSRDAILQICRDRKWDIHADGVTIIPTPPSQPAPLHTS-SEDQLFKLTE 178          
BLAST of Gcaud1856.t1 vs. uniprot
Match: A0A6J1MM82_BICAN (COP9 signalosome complex subunit 8 n=4 Tax=Satyrini TaxID=127320 RepID=A0A6J1MM82_BICAN)

HSP 1 Score: 86.3 bits (212), Expect = 1.030e-17
Identity = 55/173 (31.79%), Postives = 90/173 (52.02%), Query Frame = 0
Query:   18 ELCEDAELTAAEKNDVHPFPAFH--LLGLLL-QEDLNEARFLWKRLPP-LCQENTETKAAWKLAQALWKRDNSEFFQAAERRHWSQEAGHLVQELVRRKKEAAKQLVERSYSCISLQRASALLGLDQPALLQLCQSEEWVVEDNFILIAKVKTNRKIPNHAAVQQSELQVLTE 186
            +LC D E    E  +    P+ +  LL + L Q DL  A+FLWKR+P  +   N E  A W + Q LWK++ S  + A     W++   ++++ L  + +E A  L+ RSYS ISL    ++ GL   A+ Q+C+  +W ++D+ + I      +  P H +  + +L  LTE
Sbjct:    7 KLCTDLEKQELEAPNGVASPSTYAQLLAIYLYQNDLCNAKFLWKRIPQTITSSNPELTAIWAVGQKLWKKNLSATYHALAAYTWTEPVANIIRALEEKVRERAFNLIGRSYSTISLDTVVSMTGLSCEAVQQICRERKWEMQDDGVTINPTPPTQPAPLHTS-SEDQLFKLTE 178          
BLAST of Gcaud1856.t1 vs. uniprot
Match: UPI0018E5076F (COP9 signalosome complex subunit 8 n=2 Tax=Coliadinae TaxID=42450 RepID=UPI0018E5076F)

HSP 1 Score: 86.3 bits (212), Expect = 1.030e-17
Identity = 46/143 (32.17%), Postives = 79/143 (55.24%), Query Frame = 0
Query:   45 LLQEDLNEARFLWKRLPP-LCQENTETKAAWKLAQALWKRDNSEFFQAAERRHWSQEAGHLVQELVRRKKEAAKQLVERSYSCISLQRASALLGLDQPALLQLCQSEEWVVEDNFILIAKVKTNRKIPNHAAVQQSELQVLTE 186
            L Q DL  A+FLWKR+P  +   N E  A W + Q +WK+D    +QA    HW +    +++ L  + +E A  L+ RSYS IS++   ++ GL + A+LQ+C+  +W + ++ + +  +   +  P H +  + +L  LTE
Sbjct:   37 LYQNDLCNAKFLWKRIPQNITSSNPELVAIWTVGQKMWKKDLPRTYQALAAYHWVEPVATIMRALEEKVRERAFNLIGRSYSSISIETVVSMTGLSKEAVLQICRDRKWELNEDGVTVNPMPPVQPAPLHTS-SEDQLFKLTE 178          
BLAST of Gcaud1856.t1 vs. uniprot
Match: A0A250WT66_9CHLO (CSN8_PSD8_EIF3K domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WT66_9CHLO)

HSP 1 Score: 85.9 bits (211), Expect = 1.920e-17
Identity = 54/183 (29.51%), Postives = 99/183 (54.10%), Query Frame = 0
Query:   15 RVVELCEDAELTAAEKNDVHPFP-AFHLLGLLLQEDLNEARFLWKRLPP-LCQENTETKAAWKLAQALWKRDNSEFFQAAERRHWSQEAGHLVQELVRRKKEAAKQLVERSYSCISLQRASALLGLDQPALLQLCQSEEWVVEDNFILIAKVKTN---RKIPNHAAVQQSELQVLTEQLIKLQ 192
            ++++ CE   L ++  + +  +P A HLLG +  ++LN+ARFLWKR+P  + Q N E +A W+L Q  W R     +QA +   WS +   L++ LV + +E    L+  +Y+ ++  + + L G+ Q   L  C+   W ++D+  +   +  N   +K+ + A +QQ     +TE +I L+
Sbjct:   23 KILDACE---LESSNPHVLEDWPCALHLLGHIYNQNLNDARFLWKRIPASVKQNNPELEAVWRLLQFAWSRQYQGLWQALQGYQWSTQLQPLIESLVIKMREHLLDLISTAYATVTPAKIALLCGMTQAETLSTCRLLGWQIDDSTGMCKVLPKNTEGKKLDSAANLQQ-----MTEYMIHLE 197          
The following BLAST results are available for this feature:
BLAST of Gcaud1856.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IG95_9FLOR3.580e-8266.67COP9 signalosome complex subunit 8 n=1 Tax=Gracila... [more]
A0A6J1WPI6_GALME4.860e-1932.95COP9 signalosome complex subunit 8 n=1 Tax=Galleri... [more]
UPI00067E54CD3.730e-1831.40COP9 signalosome complex subunit 8 n=1 Tax=Amyeloi... [more]
A0A194PKA5_PAPXU5.230e-1831.98COP9 signalosome complex subunit 8 n=4 Tax=Papilio... [more]
A0A3S2LC84_CHISP5.350e-1831.61COP9 signalosome complex subunit 8 n=2 Tax=Crambid... [more]
A0A212EHT9_DANPL1.030e-1731.79COP9 protein n=2 Tax=Danaus TaxID=13036 RepID=A0A2... [more]
A0A8B8HUL5_9NEOP1.030e-1731.79COP9 signalosome complex subunit 8 n=3 Tax=Nymphal... [more]
A0A6J1MM82_BICAN1.030e-1731.79COP9 signalosome complex subunit 8 n=4 Tax=Satyrin... [more]
UPI0018E5076F1.030e-1732.17COP9 signalosome complex subunit 8 n=2 Tax=Coliadi... [more]
A0A250WT66_9CHLO1.920e-1729.51CSN8_PSD8_EIF3K domain-containing protein n=1 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR033464CSN8/PSMD8/EIF3KPFAMPF10075CSN8_PSD8_EIF3Kcoord: 40..165
e-value: 1.3E-22
score: 80.3
NoneNo IPR availableGENE3D1.25.40.990coord: 17..163
e-value: 1.1E-15
score: 59.6
NoneNo IPR availablePANTHERPTHR13339:SF1BNAA08G07630D PROTEINcoord: 13..191
IPR033205COP9 signalosome, subunit CSN8PANTHERPTHR13339COP9 SIGNALOSOME COMPLEX SUBUNIT 8coord: 13..191
IPR000717Proteasome component (PCI) domainPROSITEPS50250PCIcoord: 9..177
score: 13.309792

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1223_length_12420_cov_4.813286contigNODE_1223_length_12420_cov_4.813286:3168..3755 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1856.t1Gcaud1856.t1Gracilaria caudata M_176_S67 malemRNANODE_1223_length_12420_cov_4.813286 3168..3755 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1856.t1 ID=Gcaud1856.t1|Name=Gcaud1856.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=196bp
MSIITAAAEALDVARVVELCEDAELTAAEKNDVHPFPAFHLLGLLLQEDL
NEARFLWKRLPPLCQENTETKAAWKLAQALWKRDNSEFFQAAERRHWSQE
AGHLVQELVRRKKEAAKQLVERSYSCISLQRASALLGLDQPALLQLCQSE
EWVVEDNFILIAKVKTNRKIPNHAAVQQSELQVLTEQLIKLQTTS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033464CSN8_PSD8_EIF3K
IPR033205COP9_CSN8
IPR000717PCI_dom