Gcaud130.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud130.t1
Unique NameGcaud130.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length177
Homology
BLAST of Gcaud130.t1 vs. uniprot
Match: A0A2V3IRV7_9FLOR (IAA-amino acid hydrolase ILR1-like 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRV7_9FLOR)

HSP 1 Score: 210 bits (534), Expect = 1.320e-63
Identity = 103/176 (58.52%), Postives = 120/176 (68.18%), Query Frame = 0
Query:    1 MDALPMTGQPDADAPLDTYATEECHMPGTAVAHKHVMKSSDQPGTESGNGYYHACGHDGHTAMMLIAAHWIENNXXXXXXXXXXXXXXXXXXXXXSDNRSGAQVVVEDGLFDIHPDIHAVYAVHGGPGMPVGNFLISTSAIMAGSGRFSIMIHGTGGHAANPGRAQTEPLLAASAI 176
            MDALPM G P+    + T   E CHMPG+A++H H   +SDQP  +  +  +H CGHDGHTAMMLI AHWI+ N                     SDN SGA+VV+ +GLF+ HPDIHAVY VHGGPGMPVGNFL   SA+MAGSG F+I I GTGGHAANPGR Q+EPLLAASAI
Sbjct:   33 MDALPMAGSPEEGRTVGTSIQEGCHMPGSAISHSHATTTSDQPSIKDASQLHHGCGHDGHTAMMLITAHWIQENQDKVHRKVVVFFQPAEEARRESDNMSGAEVVIREGLFEAHPDIHAVYGVHGGPGMPVGNFLTGKSAMMAGSGGFTIAIDGTGGHAANPGREQSEPLLAASAI 208          
BLAST of Gcaud130.t1 vs. uniprot
Match: A0A2V3IU98_9FLOR (Putative hydrolase YxeP n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IU98_9FLOR)

HSP 1 Score: 92.4 bits (228), Expect = 8.490e-19
Identity = 54/141 (38.30%), Postives = 71/141 (50.35%), Query Frame = 0
Query:   37 MKSSDQPGTESGNGYYHACGHDGHTAMMLIAAHWIENNXXXXXXXXXXXXXXXXXXXXXSDNRSGAQVVVEDGLFD-IHPDIHAVYAVHGGPGMPVGNFLISTSAIMAGSGRFSIMIHGTGGHAANPGRAQTEPLLAASAI 176
            MK +        + Y+H CGHDGHT  +L  AH +                            SGA+V ++ GL + IHPD+ AVYA+H  P + VG   I    +M     FSIMI GTGGHAA PG  ++EPLLAA ++
Sbjct:  104 MKGAPTDPPRKNDDYHHGCGHDGHTTCLLAVAHCLHELRHLCKRKVVLFFQPAEESGMPLKGGSGARVALDHGLLETIHPDVSAVYALHCWPPLRVGQVGIGDGPMMGTGTTFSIMIEGTGGHAATPGPDRSEPLLAACSL 244          
BLAST of Gcaud130.t1 vs. uniprot
Match: A0A2E6QGN0_9PROT (Amidohydrolase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E6QGN0_9PROT)

HSP 1 Score: 90.9 bits (224), Expect = 2.390e-18
Identity = 51/137 (37.23%), Postives = 75/137 (54.74%), Query Frame = 0
Query:   40 SDQPGTESGNGYYHACGHDGHTAMMLIAAHWIENNXXXXXXXXXXXXXXXXXXXXXSDNRSGAQVVVEDGLFDIHPDIHAVYAVHGGPGMPVGNFLISTSAIMAGSGRFSIMIHGTGGHAANPGRAQTEPLLAASAI 176
            SD+P     +G  HACGHDGHTAM+L AA ++  N                      +  +GA+ ++EDGLFD +P +  +Y VH  PG+P G   I    IMA +  F +++ G GGH A P ++  +P++AASA+
Sbjct:   86 SDKPYKSVHDGVMHACGHDGHTAMLLGAARYLAENRNFKGTTVFVFQPA-------EEGAAGARAMIEDGLFDRYP-VDFIYGVHNMPGLPAGKIAIGAGPIMAAADSFEVIVQGRGGHGAMP-QSTADPVVAASAM 213          
BLAST of Gcaud130.t1 vs. uniprot
Match: A0A2S6U3U5_9PROT (Putative hydrolase YxeP n=1 Tax=Alphaproteobacteria bacterium MarineAlpha4_Bin1 TaxID=2013074 RepID=A0A2S6U3U5_9PROT)

HSP 1 Score: 89.4 bits (220), Expect = 8.780e-18
Identity = 52/128 (40.62%), Postives = 70/128 (54.69%), Query Frame = 0
Query:   49 NGYYHACGHDGHTAMMLIAAHWIENNXXXXXXXXXXXXXXXXXXXXXSDNRSGAQVVVEDGLFDIHPDIHAVYAVHGGPGMPVGNFLISTSAIMAGSGRFSIMIHGTGGHAANPGRAQTEPLLAASAI 176
            NG  HACGHDGHTAM+L AA ++  +                      +   GA+ +V++GLFD+ P + AVY +H  PG PVG FLI   A+MAG   F I I GTG H A P  +  +P++ A+ I
Sbjct:   95 NGKMHACGHDGHTAMLLGAARYLAEHRDFDGCVHFIFQPA-------EEGLGGAKAMVDEGLFDLFP-MEAVYGMHNSPGYPVGTFLIRPGAMMAGGAFFDIAITGTGAHGARP-ESGIDPVIVAAQI 213          
BLAST of Gcaud130.t1 vs. uniprot
Match: A0A158CJC9_9BURK (Amidohydrolase n=2 Tax=Caballeronia hypogeia TaxID=1777140 RepID=A0A158CJC9_9BURK)

HSP 1 Score: 89.0 bits (219), Expect = 1.510e-17
Identity = 55/141 (39.01%), Postives = 76/141 (53.90%), Query Frame = 0
Query:   36 VMKSSDQPGTESGNGYYHACGHDGHTAMMLIAAHWIENNXXXXXXXXXXXXXXXXXXXXXSDNRSGAQVVVEDGLFDIHPDIHAVYAVHGGPGMPVGNFLISTSAIMAGSGRFSIMIHGTGGHAANPGRAQTEPLLAASAI 176
            + +++D     +  G  HACGHDGHTAM+L AAH++  +                      +   GAQV+VEDGLF+  P + AV+ VH  PG+P G   +   AIMA S RF I + GT  HAA P   + +P+LAAS +
Sbjct:   97 IHETNDFAHKSANPGKMHACGHDGHTAMLLGAAHYLAKHGDFDGIVHFIFQPA-------EEAGGGAQVMVEDGLFERFP-VDAVFGVHNWPGLPEGTIGLRDGAIMASSNRFKIAVRGTSCHAARPHTGR-DPILAASQL 228          
BLAST of Gcaud130.t1 vs. uniprot
Match: A0A257FXT1_9BURK (Amidohydrolase n=4 Tax=Comamonadaceae TaxID=80864 RepID=A0A257FXT1_9BURK)

HSP 1 Score: 88.2 bits (217), Expect = 2.300e-17
Identity = 56/127 (44.09%), Postives = 70/127 (55.12%), Query Frame = 0
Query:   50 GYYHACGHDGHTAMMLIAAHWIENNXXXXXXXXXXXXXXXXXXXXXSDNRSGAQVVVEDGLFDIHPDIHAVYAVHGGPGMPVGNFLISTSAIMAGSGRFSIMIHGTGGHAANPGRAQTEPLLAASAI 176
            G  HACGHDGHTAM+L AA  I                         +   GA  +++DGLF+ HP   AV+A+H  PGMPVG+ +    A MA S   +I IHGTGGH A P RA  +PL+AAS+I
Sbjct:   97 GLMHACGHDGHTAMLLAAAKAIAQ-------APEFDGTLNLIFQPAEEGGGGAVRMMDDGLFEHHP-CDAVFAMHNMPGMPVGHLVFRDGAAMASSDYATIRIHGTGGHGAMPHRA-ADPLVAASSI 214          
BLAST of Gcaud130.t1 vs. uniprot
Match: K9H1P8_9PROT (Catalyzes the cleavage of p-aminobenzoyl-glutamate to p-aminobenzoate and glutamate, subunit A n=1 Tax=Caenispirillum salinarum AK4 TaxID=1238182 RepID=K9H1P8_9PROT)

HSP 1 Score: 87.4 bits (215), Expect = 4.390e-17
Identity = 51/141 (36.17%), Postives = 76/141 (53.90%), Query Frame = 0
Query:   36 VMKSSDQPGTESGNGYYHACGHDGHTAMMLIAAHWIENNXXXXXXXXXXXXXXXXXXXXXSDNRSGAQVVVEDGLFDIHPDIHAVYAVHGGPGMPVGNFLISTSAIMAGSGRFSIMIHGTGGHAANPGRAQTEPLLAASAI 176
            V  + D+P     +G  HACGHDGHT M+L AA ++                         + R+GA+ ++EDGLFD  P + AV+ VH  PG+P G+  +S   +MA + RF+I I G G HAA P   + +P++A +A+
Sbjct:   83 VEAAEDRPHKSVHHGVMHACGHDGHTTMLLGAARYLAETRRFSGTLVFIFQPA-------EEGRAGARAMIEDGLFDRFP-VSAVWGVHNMPGLPAGSVAVSPGPVMAAADRFTITIQGKGAHAAAPHLGR-DPVVAGAAL 214          
BLAST of Gcaud130.t1 vs. uniprot
Match: UPI000E6542D4 (M20 family metallopeptidase n=1 Tax=Calidifontimicrobium sediminis TaxID=2259674 RepID=UPI000E6542D4)

HSP 1 Score: 87.4 bits (215), Expect = 4.530e-17
Identity = 52/141 (36.88%), Postives = 78/141 (55.32%), Query Frame = 0
Query:   36 VMKSSDQPGTESGNGYYHACGHDGHTAMMLIAAHWIENNXXXXXXXXXXXXXXXXXXXXXSDNRSGAQVVVEDGLFDIHPDIHAVYAVHGGPGMPVGNFLISTSAIMAGSGRFSIMIHGTGGHAANPGRAQTEPLLAASAI 176
            + ++SD+P      G  HACGHDGHTAM+L AA  +  +                      +   GA  ++ DGLF+ HP + AV+A+H  PG+P+G+  +   A MA S   +I +HGTGGH A P RA  +P++AA+++
Sbjct:   84 IDEASDRPWKSQRAGLMHACGHDGHTAMLLAAAKHLAEHGGFDGTLVLIFQPA-------EEGGGGALRMMADGLFERHP-VDAVFAMHNMPGVPLGHLWLRAGAAMASSDYATITLHGTGGHGAMPHRA-ADPVVAAASL 215          
BLAST of Gcaud130.t1 vs. uniprot
Match: A0A2N4XL92_9RHOO (Amidohydrolase n=2 Tax=Uliginosibacterium TaxID=392735 RepID=A0A2N4XL92_9RHOO)

HSP 1 Score: 87.0 bits (214), Expect = 5.920e-17
Identity = 50/127 (39.37%), Postives = 70/127 (55.12%), Query Frame = 0
Query:   50 GYYHACGHDGHTAMMLIAAHWIENNXXXXXXXXXXXXXXXXXXXXXSDNRSGAQVVVEDGLFDIHPDIHAVYAVHGGPGMPVGNFLISTSAIMAGSGRFSIMIHGTGGHAANPGRAQTEPLLAASAI 176
            G  HACGHDGHTAM+L AA ++  +                      + R GA  ++ DG F+  P + ++Y +H  PGMPVG F I+   +MA + RF I+I G GGHAA P  A  +PL+A +A+
Sbjct:   96 GCMHACGHDGHTAMLLGAAEYLAQHRNFDGCLVFVFQPA-------EEGRGGASAMIADGFFERFP-VQSIYGLHNWPGMPVGRFGITPGPVMASADRFDILITGHGGHAAMPNLA-ADPLVAGAAL 213          
BLAST of Gcaud130.t1 vs. uniprot
Match: A0A0P0MEF4_9BURK (Putative hydrolase YxeP n=2 Tax=unclassified Limnohabitans TaxID=2626134 RepID=A0A0P0MEF4_9BURK)

HSP 1 Score: 86.3 bits (212), Expect = 1.140e-16
Identity = 52/141 (36.88%), Postives = 78/141 (55.32%), Query Frame = 0
Query:   36 VMKSSDQPGTESGNGYYHACGHDGHTAMMLIAAHWIENNXXXXXXXXXXXXXXXXXXXXXSDNRSGAQVVVEDGLFDIHPDIHAVYAVHGGPGMPVGNFLISTSAIMAGSGRFSIMIHGTGGHAANPGRAQTEPLLAASAI 176
            + ++S    + +  G  HACGHDGHTAM+L AAH +  N                      +   GA  +++DGLFD+ P  +A++A+H  PG+PVG F+  + + MA S   +I ++GTGGH   P RA  + L+AA+AI
Sbjct:   83 IQEASGAEWSSTKPGLMHACGHDGHTAMLLAAAHELALNSEFDGVLHLIFQPA-------EEGGGGALRMMQDGLFDLFP-CNAIFAMHNMPGVPVGKFVFRSGSAMASSDYVTIRVNGTGGHGGMPHRA-ADSLVAAAAI 214          
The following BLAST results are available for this feature:
BLAST of Gcaud130.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IRV7_9FLOR1.320e-6358.52IAA-amino acid hydrolase ILR1-like 1 n=1 Tax=Graci... [more]
A0A2V3IU98_9FLOR8.490e-1938.30Putative hydrolase YxeP n=1 Tax=Gracilariopsis cho... [more]
A0A2E6QGN0_9PROT2.390e-1837.23Amidohydrolase n=1 Tax=Rhodospirillaceae bacterium... [more]
A0A2S6U3U5_9PROT8.780e-1840.63Putative hydrolase YxeP n=1 Tax=Alphaproteobacteri... [more]
A0A158CJC9_9BURK1.510e-1739.01Amidohydrolase n=2 Tax=Caballeronia hypogeia TaxID... [more]
A0A257FXT1_9BURK2.300e-1744.09Amidohydrolase n=4 Tax=Comamonadaceae TaxID=80864 ... [more]
K9H1P8_9PROT4.390e-1736.17Catalyzes the cleavage of p-aminobenzoyl-glutamate... [more]
UPI000E6542D44.530e-1736.88M20 family metallopeptidase n=1 Tax=Calidifontimic... [more]
A0A2N4XL92_9RHOO5.920e-1739.37Amidohydrolase n=2 Tax=Uliginosibacterium TaxID=39... [more]
A0A0P0MEF4_9BURK1.140e-1636.88Putative hydrolase YxeP n=2 Tax=unclassified Limno... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002933Peptidase M20PFAMPF01546Peptidase_M20coord: 48..136
e-value: 1.0E-13
score: 51.5
NoneNo IPR availableGENE3D3.40.630.10Zn peptidasescoord: 48..142
e-value: 1.5E-34
score: 121.5
NoneNo IPR availableGENE3D3.30.70.360coord: 143..176
e-value: 1.5E-34
score: 121.5
NoneNo IPR availablePANTHERPTHR11014:SF63METALLOPEPTIDASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_6G09600)-RELATEDcoord: 1..176
NoneNo IPR availableSUPERFAMILY53187Zn-dependent exopeptidasescoord: 43..170
IPR017439AmidohydrolasePANTHERPTHR11014PEPTIDASE M20 FAMILY MEMBERcoord: 1..176

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_9483_length_622_cov_4.039548contigNODE_9483_length_622_cov_4.039548:2..530 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud130.t1Gcaud130.t1Gracilaria caudata M_176_S67 malemRNANODE_9483_length_622_cov_4.039548 2..530 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud130.t1 ID=Gcaud130.t1|Name=Gcaud130.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=177bp
MDALPMTGQPDADAPLDTYATEECHMPGTAVAHKHVMKSSDQPGTESGNG
YYHACGHDGHTAMMLIAAHWIENNQQLVRRKVVIFFQPSEESRRKSDNRS
GAQVVVEDGLFDIHPDIHAVYAVHGGPGMPVGNFLISTSAIMAGSGRFSI
MIHGTGGHAANPGRAQTEPLLAASAIX
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002933Peptidase_M20
IPR017439Amidohydrolase