Gcaud2463.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2463.t1
Unique NameGcaud2463.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length606
Homology
The following BLAST results are available for this feature:
BLAST of Gcaud2463.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 35..45
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 46..67
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 68..96
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 97..113
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 114..605
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..8
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 9..34
NoneNo IPR availableTMHMMTMhelixcoord: 9..31
NoneNo IPR availableTMHMMTMhelixcoord: 46..67
NoneNo IPR availableTMHMMTMhelixcoord: 95..112

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_947_length_15859_cov_4.413686contigNODE_947_length_15859_cov_4.413686:13124..14941 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2463.t1Gcaud2463.t1Gracilaria caudata M_176_S67 malemRNANODE_947_length_15859_cov_4.413686 13124..14941 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2463.t1 ID=Gcaud2463.t1|Name=Gcaud2463.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=606bp
MSVVKYTKILLLVIVEFFRGMAWLMAALHISSFWLLSVHVVPVMNIFVVA
FAVFVLVFGLLLVFLYIKYDSSFHPPMLLQTIAETVGLLRATLQYRHLLL
VFGNIVAWFGYFGCRDCWFREDALNSGIGNAVRATLPGLIGPIYCDQADL
SDAVAAMRGLRNKWNDLKEKEKYIVDSATLVYTLSYKHIPVDHNGTMRRL
SEARATDILRKLMASAKSHSYNRLMLWCDGASSCGVRTDQAWVDIGLLPY
AIYRTFRVDTSVHRTCLMSNRLWLDLEKALSRLTCGMDVIDEDVKDTGVS
YYAIKSIAGQGHKSMAAVIRMASRIVQGDYEISAASRESDKSDIMNWAKK
ILMRSGVREMNEALGWSGDPIEALQAKAVLTRISGFSPQKSRTGAEVGKI
CLPTNVREECSSEEAVEGNKVEPWRTEFWLRLLQFSEQEIGKLENEDLEL
TSYRFEEERTGKWEAHVVSLQGDYYISMSYFENVEPVRSYWCRDAGADIR
VRITDQAASRELWLVTNSHVKKIGKDDKWAHKMIEEMFKTRGMFDTPRHS
GPTVLQLEWERCDIRVTEDSAVKWFNDVCKETAKWLHYVNAKIRERNGGI
EYKVP*
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