Gcaud2462.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2462.t1
Unique NameGcaud2462.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length326
Homology
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BLAST of Gcaud2462.t1 vs. uniprot
Match: A0A2V3IXM5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXM5_9FLOR)

HSP 1 Score: 154 bits (388), Expect = 2.440e-38
Identity = 96/246 (39.02%), Postives = 145/246 (58.94%), Query Frame = 0 
Query:   14 ITPHALQIDRAGDVIVKMKASVIDSERLTFTVLRKNMQCALDSLEVTDSRGTTPLVTFSSP--TNFDGKKMQSEQAWDAMLREARGARVQVEAEGGCADGTLMGIQRDFAANDEQVCSTSVVLLSNGEVSVHRVDDIRSVCFLDDDITERLKRESFLKHSVVETLKHYRIVIVVSGKGEGQVNVCYRQQSPYTPAFETFYTMN--DTADENGYRKTKR---FFTIRNPMHYDIVEVEVQLQTGIYR 252
            I P +L I R G + V  KA+V+DSE+L FTV +K MQ  +DSL+V DSRG  P +TF S   ++ D   ++SE AW+ ++ E +GA VQV     C +G L+G++   A + E+   TSV+LL + +VS H +D++ S+ F +   +  LK+ +  K   ++T  +Y I IV SG G G+V+V Y Q     P F T Y ++  D A   G  +  R   F TIRNP+  DI +VEV +Q+ +++
Sbjct:   16 ILPKSLIISRDGFLQVTRKAAVVDSEKLYFTVPKKQMQRVVDSLQVFDSRGNIPCITFPSSFFSSADNFNLRSENAWEDLVTEQQGAFVQVSMGDDCTEGHLIGLRHHGAGDAEK---TSVLLLRDAKVSAHNIDNVTSISFRESRASAELKKFTTSKGFDLDTKGNYSITIVTSGSGPGEVSVSYTQIVSGAP-FGTSYVISPADGAPSYGIHRNMRIKCFVTIRNPLSCDIEDVEVTIQSQMFQ 257
The following BLAST results are available for this feature:
BLAST of Gcaud2462.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IXM5_9FLOR2.440e-3839.02Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 257..292

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_947_length_15859_cov_4.413686contigNODE_947_length_15859_cov_4.413686:5546..6584 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2462.t1Gcaud2462.t1Gracilaria caudata M_176_S67 malemRNANODE_947_length_15859_cov_4.413686 5546..6584 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2462.t1 ID=Gcaud2462.t1|Name=Gcaud2462.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=326bp
MMKAVREEGKGRIITPHALQIDRAGDVIVKMKASVIDSERLTFTVLRKNM
QCALDSLEVTDSRGTTPLVTFSSPTNFDGKKMQSEQAWDAMLREARGARV
QVEAEGGCADGTLMGIQRDFAANDEQVCSTSVVLLSNGEVSVHRVDDIRS
VCFLDDDITERLKRESFLKHSVVETLKHYRIVIVVSGKGEGQVNVCYRQQ
SPYTPAFETFYTMNDTADENGYRKTKRFFTIRNPMHYDIVEVEVQLQTGI
YRRGRYGPAYGDVENPDSSSDSVSERSTEEDDEFFDLASSDSTTSIRAED
GLENNVYNINQKVTLKEGESVKLMW*
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