Gcaud2929.t1 (polypeptide) Gracilaria caudata M_176_S67 male
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Overview
Homology
BLAST of Gcaud2929.t1 vs. uniprot
Match: A0A2V3IHA4_9FLOR (E3 ubiquitin-protein ligase RNF12 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHA4_9FLOR) HSP 1 Score: 278 bits (710), Expect = 5.390e-93 Identity = 126/148 (85.14%), Postives = 136/148 (91.89%), Query Frame = 0
Query: 1 MFDERADWEPFDPAHSPVPARRRLATRPYRPQGRRAVSRLTDFLGFRISRRRAPIARDDDDSLGLTYEELLELDDGNVRCGLSKHELDDLTTLEATKEHMNMDCHICLERFEYGVPLVLLSCDHVYHKHCIHTWLKQKRSCPICRCDL 148
MFDERADWE FDPA SP+PARRRLATRP+RP RR V+R+TDFL FRISRRRAP+ RDDDDSLGLTYEELLELDDGNVRCGLSK ELDDLTT +ATKEHMN DCHICL+ F+YGV LV+L+CDHVYHKHCIHTWLKQKRSCPICRCDL
Sbjct: 91 MFDERADWEAFDPAQSPIPARRRLATRPFRPHSRRRVARITDFLAFRISRRRAPVVRDDDDSLGLTYEELLELDDGNVRCGLSKDELDDLTTFDATKEHMNQDCHICLDGFDYGVSLVMLACDHVYHKHCIHTWLKQKRSCPICRCDL 238
BLAST of Gcaud2929.t1 vs. uniprot
Match: R7QF15_CHOCR (RING-type domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QF15_CHOCR) HSP 1 Score: 131 bits (329), Expect = 7.520e-37 Identity = 61/99 (61.62%), Postives = 68/99 (68.69%), Query Frame = 0
Query: 50 RRRAPIARDDDDSLGLTYEELLELDDGNVRCGLSKHELDDLTTLEATKEHMNMDCHICLERFEYGVPLVLLSCDHVYHKHCIHTWLKQKRSCPICRCDL 148
R R DD++SLGLTYEEL+EL++ NV CGLSK EL L EA KEHMN CHICLE EY LV L C H YHK CIH WL +KRSCP CR +L
Sbjct: 11 RHRVRDEMDDNESLGLTYEELIELEERNVMCGLSKAELVGLGHFEAGKEHMNQTCHICLEGVEYAAVLVQLKCSHAYHKECIHKWLSRKRSCPTCRSEL 109
BLAST of Gcaud2929.t1 vs. uniprot
Match: R0GCX8_9BRAS (RING-type domain-containing protein n=3 Tax=Capsella rubella TaxID=81985 RepID=R0GCX8_9BRAS) HSP 1 Score: 71.2 bits (173), Expect = 4.420e-12 Identity = 38/108 (35.19%), Postives = 59/108 (54.63%), Query Frame = 0
Query: 56 ARDDDDSLGLTYEELLELDD--GNVRCGLSKHELDDLTTLE---ATKEHM----------NMDCHICLERFEYGVPLVLLSCDHVYHKHCIHTWLKQKRSCPICRCDL 148
A +D D +TYEE+ EL++ G V GLS+ ++ L T + TK + C ICL +E G +++L C+H+YHK CI WLKQ + C +C+ ++
Sbjct: 146 ANEDIDPANMTYEEINELEEAIGEVSKGLSQEKISRLKTHKYGTKTKTRCWLRKKKFVADDSQCSICLVDYENGDKIMVLPCNHIYHKDCISQWLKQNKVCCVCKAEV 253
BLAST of Gcaud2929.t1 vs. uniprot
Match: UPI001F072816 (E3 ubiquitin-protein ligase RLIM isoform X1 n=2 Tax=Hypomesus transpacificus TaxID=137520 RepID=UPI001F072816) HSP 1 Score: 72.4 bits (176), Expect = 5.380e-12 Identity = 37/100 (37.00%), Postives = 54/100 (54.00%), Query Frame = 0
Query: 49 SRRRAPIARDDDDSLG---LTYEELLELDDGNVRCGLSKHELDDLTTLEATKEHMNMDCHICLERFEYGVPLVLLSCDHVYHKHCIHTWLKQKRSCPICR 145
+R RAPI+ ++ SL L + LL DD + GL+K ++D+L+T + C +C+ + G L L C H YH HCI WL + +CPICR
Sbjct: 695 ARPRAPISLEEPSSLPFLRLAHFFLLNDDDEDQPRGLTKEQIDNLSTRNFGESDALKTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICR 794
BLAST of Gcaud2929.t1 vs. uniprot
Match: A0A7S2HVB2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HVB2_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 9.180e-12 Identity = 26/56 (46.43%), Postives = 34/56 (60.71%), Query Frame = 0
Query: 93 LEATKEHMNMDCHICLERFEYGVPLVLLSCDHVYHKHCIHTWLKQKRSCPICRCDL 148
LE EH DC IC+ F G +V C+HV+HK C WL+Q R+CP+CR D+
Sbjct: 36 LEEFPEHYPKDCCICMGDFVAGEVIVATECEHVFHKRCFREWLRQARTCPVCRTDI 91
BLAST of Gcaud2929.t1 vs. uniprot
Match: UPI001C3E2B53 (E3 ubiquitin-protein ligase RNF12-A-like n=1 Tax=Oncorhynchus tshawytscha TaxID=74940 RepID=UPI001C3E2B53) HSP 1 Score: 71.6 bits (174), Expect = 1.020e-11 Identity = 37/100 (37.00%), Postives = 53/100 (53.00%), Query Frame = 0
Query: 49 SRRRAPIARDDDDSLG---LTYEELLELDDGNVRCGLSKHELDDLTTLEATKEHMNMDCHICLERFEYGVPLVLLSCDHVYHKHCIHTWLKQKRSCPICR 145
+R RAPI+ ++ SL L + LL DD GL+K ++D+L+T + C +C+ + G L L C H YH HCI WL + +CPICR
Sbjct: 835 ARPRAPISLEEPGSLPFLRLAHFFLLNDDDEEQPRGLTKEQIDNLSTRNFGESDALKTCSVCITEYAEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICR 934
BLAST of Gcaud2929.t1 vs. uniprot
Match: A0A8C3ZSR3_9TELE (Ring finger protein, LIM domain interacting n=2 Tax=Denticeps clupeoides TaxID=299321 RepID=A0A8C3ZSR3_9TELE) HSP 1 Score: 71.2 bits (173), Expect = 1.320e-11 Identity = 37/99 (37.37%), Postives = 51/99 (51.52%), Query Frame = 0
Query: 50 RRRAPIARDDDDSLG---LTYEELLELDDGNVRCGLSKHELDDLTTLEATKEHMNMDCHICLERFEYGVPLVLLSCDHVYHKHCIHTWLKQKRSCPICR 145
R RAPI ++ SL L + LL DD GL+K ++D+L+T + C +C+ + G L L C H YH HCI WL + +CPICR
Sbjct: 524 RPRAPITLEETGSLPFLRLAHFFLLSDDDDEQPRGLTKEQIDNLSTRNFGESDALKTCSVCIMEYAQGNKLRKLPCSHEYHVHCIDRWLSENSTCPICR 622
BLAST of Gcaud2929.t1 vs. uniprot
Match: A0A7S0BI50_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BI50_9RHOD) HSP 1 Score: 67.4 bits (163), Expect = 1.420e-11 Identity = 32/91 (35.16%), Postives = 54/91 (59.34%), Query Frame = 0
Query: 65 LTYEELLELDD--GNVRCGLSKHELDDLTTLEA-TKEHMNMD----CHICLERFEYGVPLVLLSCDHVYHKHCIHTWLKQKRSCPICRCDL 148
LTYEE+L L++ G V GL++ ELD + T + T + +D C +CLE + L CDH++H C+ WL++ ++CP+C+ ++
Sbjct: 1 LTYEEMLALEEHMGKVIKGLTEEELDSIPTEKVCTHDQERLDEEKACSVCLEDLLEDEVVRRLRCDHIFHIPCVDNWLRENKTCPVCKVEV 91
BLAST of Gcaud2929.t1 vs. uniprot
Match: A0A6P8H5L1_CLUHA (E3 ubiquitin-protein ligase RNF12-A isoform X1 n=3 Tax=Clupea harengus TaxID=7950 RepID=A0A6P8H5L1_CLUHA) HSP 1 Score: 70.5 bits (171), Expect = 2.510e-11 Identity = 36/99 (36.36%), Postives = 52/99 (52.53%), Query Frame = 0
Query: 50 RRRAPIARDDDDSLG---LTYEELLELDDGNVRCGLSKHELDDLTTLEATKEHMNMDCHICLERFEYGVPLVLLSCDHVYHKHCIHTWLKQKRSCPICR 145
R RAPI+ ++ SL L + LL +D GL+K ++D+L+T + C +C+ + G L L C H YH HCI WL + +CPICR
Sbjct: 671 RARAPISLEETGSLPFLRLAHFFLLNDEDEEQPRGLTKEQIDNLSTRNFGESDALKTCSVCITEYAQGHKLRKLPCSHEYHVHCIDRWLSENSTCPICR 769
BLAST of Gcaud2929.t1 vs. uniprot
Match: A0A6I9N0Z1_9TELE (RING finger protein 148-like n=4 Tax=Notothenioidei TaxID=8205 RepID=A0A6I9N0Z1_9TELE) HSP 1 Score: 70.1 bits (170), Expect = 2.570e-11 Identity = 25/55 (45.45%), Postives = 39/55 (70.91%), Query Frame = 0
Query: 94 EATKEHMNMDCHICLERFEYGVPLVLLSCDHVYHKHCIHTWLKQKRSCPICRCDL 148
E T NM C +CLE ++ G + +L+CDH++HK CI WL ++R+CP+C+CD+
Sbjct: 242 EETNSESNM-CAVCLESYKAGEVVTVLTCDHIFHKPCIEPWLLERRTCPMCKCDI 295 The following BLAST results are available for this feature:
BLAST of Gcaud2929.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gcaud2929.t1 ID=Gcaud2929.t1|Name=Gcaud2929.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=149bpback to top |