Gcaud1907.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1907.t1
Unique NameGcaud1907.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length107
Homology
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BLAST of Gcaud1907.t1 vs. uniprot
Match: A0A2V3J4X6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4X6_9FLOR)

HSP 1 Score: 137 bits (346), Expect = 3.820e-40
Identity = 69/101 (68.32%), Postives = 83/101 (82.18%), Query Frame = 0 
Query:    3 PPNPTRRPTLSSRLSRTVPQYVVRLTHEPSNGLHFVARHAQSRTAPALTGISQLLRRRSREISIAVIDATDATAILGEDMTKASDTLQRIDDILKNVLNED 103
            P NPT RPTLSSRLSRTVPQY VRLT+EPSNGLH++ RHAQ RTAP LT +SQ L+RRSR +S+A IDA DAT+ILG+DM  A+++L RI D L  VL++D
Sbjct:    6 PKNPTHRPTLSSRLSRTVPQYFVRLTNEPSNGLHYIVRHAQERTAPTLTAVSQQLQRRSRTLSLATIDAADATSILGDDMRAAAESLTRIKDTLSAVLSDD 106
The following BLAST results are available for this feature:
BLAST of Gcaud1907.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J4X6_9FLOR3.820e-4068.32Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_927_length_16063_cov_4.587278contigNODE_927_length_16063_cov_4.587278:372..692 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1907.t1Gcaud1907.t1Gracilaria caudata M_176_S67 malemRNANODE_927_length_16063_cov_4.587278 372..692 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1907.t1 ID=Gcaud1907.t1|Name=Gcaud1907.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=107bp
MQPPNPTRRPTLSSRLSRTVPQYVVRLTHEPSNGLHFVARHAQSRTAPAL
TGISQLLRRRSREISIAVIDATDATAILGEDMTKASDTLQRIDDILKNVL
NEDREQ*
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