Gcaud7788.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7788.t1
Unique NameGcaud7788.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length337
Homology
BLAST of Gcaud7788.t1 vs. uniprot
Match: A0A2V3J358_9FLOR (G domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J358_9FLOR)

HSP 1 Score: 122 bits (305), Expect = 5.290e-29
Identity = 69/226 (30.53%), Postives = 121/226 (53.54%), Query Frame = 0
Query:    2 ENKVIVLGNPGCGKSTLLNTALGGVYFDSGTSVGHGILPSREEVRDGATTYVDTPGLDDPLLRDQAAQYISNQLSREGIVKLVFVMKCDDLRIRGSDQAALKMVLDSLQEKGIECDMRFSIIVNQLFDYEINAIREDAAVQTKILSFINGGYKVRHVGWLPMEPNAKGKSGALLGCRERILA-FFEAAPYIVMGRGMQVDIKHDRFDEMRAQMSSVIRGLQNDVSK 226
            +  VIV GNPG GKS++LN+ +G V F+SG S+G G+  + +  R G   Y DTPGLDD  +RD+AA+ IS    R G +KL+FV   +  R+R +D A ++++++++Q  G++   +FSII+N+  + E+  + E+   +  +   +N       + ++P    A GK   L+     +   F   AP   M R     I  + F+    ++  ++  L+  + +
Sbjct:    4 QEHVIVAGNPGSGKSSILNSIIGRVKFESGISLGSGLTTALDSKRIGNVLYSDTPGLDDARIRDRAAKEISYAFRRGGKIKLIFVSTLEAGRLRSTDLATMRIIVEAIQSVGVDPAKQFSIIINKC-EPEVLELLENKKNRAMLEVPLNSAAPAGRIAYMPYRDYAAGKHNVLVTTDSNVYKEFLRTAPAFDMSRNKSFAINANGFELTVQRLQEMVEELEKKLKE 228          
BLAST of Gcaud7788.t1 vs. uniprot
Match: A0A2V3J217_9FLOR (AIG1-type G domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J217_9FLOR)

HSP 1 Score: 107 bits (266), Expect = 9.680e-23
Identity = 70/219 (31.96%), Postives = 113/219 (51.60%), Query Frame = 0
Query:    4 KVIVLGNPGCGKSTLLNTALGGVYFDSGTSVGHGILPSREEVRDGATTYVDTPGLDDPLLRDQAAQYISNQLSREGIVKLVFVMKCDDLRIRGSDQAALKMVLDSLQEKGIECDMRFSIIVNQLFDYEINAI--REDAAVQTKILSFINGGYKVRHVGWLPMEPNAKGKSGALLG--CRERILAFFEAAPYIVMGRGMQVDIKHDRFDEMRAQMSSVIR 218
            +VIV+GNPG GKST+ NT L    F+SG S+G G+  S      G  T+VDTPGLDD   R  AA+ IS  L     VK+VFV   +  R+R +D   L+ ++ +L+E   +   ++++I+N+  D     +  ++   ++  +L       + + V  +  E + +GKSG LL     ER+    E AP I +     V +K   +++   Q+   +R
Sbjct:   65 RVIVIGNPGVGKSTIQNTLLQKTVFESGISLGGGLTKSTATCTKGDLTFVDTPGLDDLYNRRTAAKEISAALRGPSTVKMVFVTALEAGRVRSADVCTLQTIVTALREVVGDMTRKYTLIINKCEDSLAQTLTKKDSLELRASVLGPYFAVEEAKQVEIIRAETSIRGKSGTLLNRQAAERLRGLIERAPTIDLPAEPVVRLKLKTYEKNAQQIDEEMR 283          
BLAST of Gcaud7788.t1 vs. uniprot
Match: A0A225X3J8_9STRA (G domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X3J8_9STRA)

HSP 1 Score: 105 bits (262), Expect = 1.120e-22
Identity = 66/203 (32.51%), Postives = 103/203 (50.74%), Query Frame = 0
Query:    6 IVLGNPGCGKSTLLNTALGGVYFDSGTSVGHGILPSREEVRDGATTYVDTPGLDDPLLRDQAAQYISNQLSREGIVKLVFVMKCDDLRIRGSDQAALKMVLDSLQEKGIECDMRFSIIVNQLFDYEINAIREDAAVQTKILSFINGG-YKVRHVGWLPMEPNAKGKSGALLGCRERILAFFE-AAPYIVMGRGMQVDIKHDRF 206
            + LGNPG GKSTLLN  +G   F +G S   G     E+       Y+DTPGL D  L+ +A   I   L + G  KL F+++ ++ R+   D A ++M++ S+ ++    D+ F+IIVN +   E  AI E      + ++ IN G Y   H+ ++P  P+   K  AL+     ++ FF   AP +V+      D+  D F
Sbjct:    7 LFLGNPGTGKSTLLNCIVGEQVFTAGISYESGFTEVVEKYEHKGNVYMDTPGLSDRTLKQRAIAAIIEALRQSGTYKLFFIVRIENGRVVADDLAIIEMMISSIDQR----DVPFTIIVNNIRKREYKAIMERGDEYMQFVTLINAGKYCTPHILFIPTLPDLDKKDNALVTLPNFVMNFFHFEAPSVVIESDHVNDVTQDEF 205          
BLAST of Gcaud7788.t1 vs. uniprot
Match: A0A0L0T1Q2_ALLM3 (G domain-containing protein n=1 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0T1Q2_ALLM3)

HSP 1 Score: 107 bits (267), Expect = 4.440e-22
Identity = 66/228 (28.95%), Postives = 120/228 (52.63%), Query Frame = 0
Query:    5 VIVLGNPGCGKSTLLNTALGGVYFDSGTSVGHGILPSRE-EVRDGATTYVDTPGLDDPLLRDQAAQYISNQLS-REGIVKLVFVMKCDDLRIRGSDQAALKMVLDSLQEKGIECDMRFSIIVNQLFDYEINAIREDAAVQTKILSFINGG-YKVRHVGWLPMEPNAKGKSGALL--GCRERILAFFEAAPYIVMGRGMQVDIKHDRFDEMRAQMSSVIRGLQNDVSKQ 227
            V+ +GNPG GKSTL+N A   +   +G+S GHGI   +  +     TT++DTPGL D   R +AA  I++ L  +EG+ +L+FV+  +  R++  D A L +VL+++++K +     + +I+N++ +  +  +  +A    K++  +N G Y   H+   P + +A+     ++       +L F E  P I +       IK   FD+  A++  ++  +    SKQ
Sbjct:  221 VMAIGNPGSGKSTLINGAAQSIVTQAGSSAGHGIQHDKLLKFEINGTTWIDTPGLSDVKYRTRAAGQITDALKDQEGLYRLIFVVTTESGRVKPDDLATLTIVLNAIRKKNVP----YGVIINKISERLLQKMLTEAEFYDKLICSLNSGPYSTNHIFLAPEDQDARDADNCIIPASAMTPVLNFIETVPCIAIRPTDVEAIKTSDFDDQEAKLKDLVEMMITAHSKQ 444          
BLAST of Gcaud7788.t1 vs. uniprot
Match: A0A662WJN4_9STRA (AAA domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WJN4_9STRA)

HSP 1 Score: 102 bits (254), Expect = 1.140e-21
Identity = 64/224 (28.57%), Postives = 116/224 (51.79%), Query Frame = 0
Query:    2 ENKVIVLGNPGCGKSTLLNTALGGVYFDSGTSVGHGILPSREEVRDGATTYVDTPGLDDPLLRDQAAQYISNQLSREGIVKLVFVMKCDDLRIRGSDQAALKMVLDSLQEKGIECDMRFSIIVNQLFDYEINAIREDAAVQTKILSFING-GYKVRHVGWLPMEPNAKGKSGALLGCRERILAFFEA-APYIVMGRGMQVDIKHDRFDEMRAQMSSVIRGLQND 223
            +   + LGNPG GKSTL+N  +G   F+SG S G G+    ++ R     Y+DTPGL D  ++ +AA  I+  L   G  KL F+++ ++ R+   D   ++ V++S+  K    D+ +SIIVN +   +   + E      K+++ IN   +K  ++ ++P  P+ + +  A       + +F  A AP + +      DI+   F +M A++ + +  L++D
Sbjct:   10 QENYLFLGNPGTGKSTLINCLIGSQVFNSGVSYGEGLTQFFQKRRHNGIVYMDTPGLADRKIQLKAAAAITQALKETGRYKLFFMVRLENGRVVSDDLVTIETVMESIDMK----DVPYSIIVNNVKKRQYAKMMEKGEEFWKVVTLINSIKFKTANIVFIPTLPSLEEEDNAYTELPTDVKSFIRADAPAVAVAPRAVNDIRFTDFRKMSAELRAELERLRSD 229          
BLAST of Gcaud7788.t1 vs. uniprot
Match: A0A662X6H2_9STRA (G domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X6H2_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 9.360e-21
Identity = 65/225 (28.89%), Postives = 112/225 (49.78%), Query Frame = 0
Query:    1 MENKVIVLGNPGCGKSTLLNTALGGVYFDSGTSVGHGILPSREEVRDGATTYVDTPGLDDPLLRDQAAQYISNQLSREGIVKLVFVMKCDDLRIRGSDQAALKMVLDSLQEKGIECDMRFSIIVNQLFDYEINAIREDAAVQTKILSFINGG-YKVRHVGWLPMEPNAKGKSGALLGCRERILAFFEA-APYIVMGRGMQVDIKHDRFDEMRAQMSSVIRGLQND 223
            ++   + LGNPG GKSTL+N  +    FDSG S G G+    ++       Y+DTPGL D  +++QAA  I+  L + G  KL F+++ ++ R+   D A ++ V+ S+  K    D+ FS+IVN +   +   + E      K+++ IN   Y   H+ ++P+ PN + +  A       + +F    AP +V+       IK   F  +  ++   +  L+ D
Sbjct:    2 LQENYLFLGNPGTGKSTLINCLVSERVFDSGVSYGSGLTQFFQKHYHNGIVYMDTPGLADRKIQEQAAAAITEALQQSGRYKLFFMVRLENGRVVSDDLATIEAVMASIDMK----DVPFSVIVNNVKKKQYATMMEKGEEFWKVVTMINSTKYTTPHIVFIPVLPNLEEEDNAYTDLPGNVKSFIRNDAPTVVIAPQDVNAIKAADFKRLVDELREELERLRTD 222          
BLAST of Gcaud7788.t1 vs. uniprot
Match: A0A225X4S8_9STRA (G domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X4S8_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 9.540e-21
Identity = 67/241 (27.80%), Postives = 122/241 (50.62%), Query Frame = 0
Query:    2 ENKVIVLGNPGCGKSTLLNTALGGVYFDSGTSVGHGILPSREEVRDGATTYVDTPGLDDPLLRDQAAQYISNQLSREGIVKLVFVMKCDDLRIRGSDQAALKMVLDSLQEKGIECDMRFSIIVNQLFDYEINAIREDAAVQTKILSFING-GYKVRHVGWLPMEPNAKGKSGALLGCRERILAFFE-AAPYIVMGRGMQVDIKHDRFDEMRAQMSSVIRGLQNDVSKQHQLLQERDSMLVR 240
            E   + +GNPG GKSTL+N  +G   FDSG S G G+  + +        Y+DTPGL D  +++ AA  I+  L + G  KL F+++ ++ R+   D A +++VL S+  + I     F IIVN +   +   + E  A   K+++ IN   +   H+ ++P+  +   +  A+      + +F     P + + R +   IK + F ++    S  +R +Q ++ + + LL+ R + L +
Sbjct:   17 EVNYLFMGNPGTGKSTLINCLVGSPIFDSGLSYGGGMTKNFQARTHENVRYMDTPGLADRNIQEMAASAITEALQQSGTYKLFFMVRLENGRVVSDDLATIEIVLSSIDLEEIP----FGIIVNNVKKRQYTKMMEKGADYLKVVTLINSINHMTPHITFIPVLDDLDEEDNAVTDLPGEVESFIRFECPAVPISRQIVKPIKIEDFKKI----SEKLRDVQEELLRDNALLERRIAELTK 249          
BLAST of Gcaud7788.t1 vs. uniprot
Match: W2QQB0_PHYPN (G domain-containing protein n=9 Tax=Phytophthora TaxID=4783 RepID=W2QQB0_PHYPN)

HSP 1 Score: 99.4 bits (246), Expect = 1.690e-20
Identity = 69/242 (28.51%), Postives = 120/242 (49.59%), Query Frame = 0
Query:    1 MENKVIVLGNPGCGKSTLLNTALGGVYFDSGTSVGHGILPSREEVRDGATTYVDTPGLDDPLLRDQAAQYISNQLSREGIVKLVFVMKCDDLRIRGSDQAALKMVLDSLQEKGIECDMRFSIIVNQLFDYEINAIREDAAVQTKILSFINGG-YKVRHVGWLPMEPNAKGKSGALLGCRERILAFFE-AAPYIVMGRGMQVDIKHDRFDEMRAQMSSVIRGLQNDVSKQHQLLQERDSMLVR 240
            M+   + LGNPG GKSTL+N  +G   F+SG S G G+    ++  D    Y+DTPGL D  ++ QAA  I+  L + G  KL F+++ ++ R+   D A ++ V+DS+  +    D+ FSI++N +   + NA+ +      K+++ IN   Y   +V ++P                  +  FF  +AP +V+      DIK   +  +   +   +  L+ D    ++ L++R   L+R
Sbjct:    1 MKENYLFLGNPGTGKSTLINCLIGHQEFESGLSYGSGMTHFFQKFSDHDKVYMDTPGLADREIKQQAATAITQALRQSGRYKLFFMVRLENGRVVSDDLATIETVMDSMDME----DVPFSIVINNVKKRQHNAMMKRGVEFFKVVTLINSSKYTTPYVTFIPTLERLDEMDNQCTELPHDVAKFFRVSAPSVVIPPECVHDIKLTDYKMLVGDLREELAQLRKD----NEALRQRAEDLIR 234          
BLAST of Gcaud7788.t1 vs. uniprot
Match: A0A662YA95_9STRA (G domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YA95_9STRA)

HSP 1 Score: 101 bits (252), Expect = 2.540e-20
Identity = 64/220 (29.09%), Postives = 112/220 (50.91%), Query Frame = 0
Query:    6 IVLGNPGCGKSTLLNTALGGVYFDSGTSVGHGILPSREEVRDGATTYVDTPGLDDPLLRDQAAQYISNQLSREGIVKLVFVMKCDDLRIRGSDQAALKMVLDSLQEKGIECDMRFSIIVNQLFDYEINAIREDAAVQTKILSFING-GYKVRHVGWLPMEPNAKGKSGALLGCRERILAFFE-AAPYIVMGRGMQVDIKHDRFDEMRAQMSSVIRGLQND 223
            + LGNPG GKSTL+N   GGV F+SG S G G+    ++       Y+DTPGL D  +++ AA+ I+  L + G  KL F+++ ++ R+   D A ++ VL S++      D+ F+I+VN +   +   + E      K+++ +N   +   H+ ++PM P+ + +   +      I AF    AP + +      +I    F E+  ++      L+ND
Sbjct:   23 LFLGNPGAGKSTLINCLAGGVMFESGVSYGGGLTKHFQKRLHDGVVYMDTPGLADRQIQETAARAITEALRQSGAYKLFFMVRLENGRVVSDDLATIETVLTSIEM----ADVPFTIVVNNVKKRQYATMMEKGTEYLKVVTLLNSIKHTTPHIVFIPMMPSLEEEDNVIADLPGGIEAFIRFKAPTVEIPPHAVKEINIADFKEVSEKLKEQQERLRND 238          
BLAST of Gcaud7788.t1 vs. uniprot
Match: A0A2V3J228_9FLOR (G domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J228_9FLOR)

HSP 1 Score: 99.4 bits (246), Expect = 2.890e-20
Identity = 70/235 (29.79%), Postives = 109/235 (46.38%), Query Frame = 0
Query:    1 MENKVIVLGNPGCGKSTLLNTALGGVYFDSGTSVGHGILPSREEVRDGATTYVDTPGLDDPLLRDQAAQYISNQLSREGIVKLVFVMKCDDLRIRGSDQAALKMVLDSLQEKGIECDMRFSIIVNQLFDYEINAIRED---AAVQTKILSFINGGYKVRHVGWLPMEPNAKGKSGALLGCR--ERILAFFEAAPYIVMGRGMQVDIKHDRFDEMRAQMSSVIRGLQNDVSKQHQL 230
            +  K+++LGNPG GKST+ NT LG    +SG S+  G+  +      G   YVDTPG+DD      A + +S  L     VKLVFV   +  R+R  D A L  VLD L+      D R+ +I+N+  D   N++ ++      +T++L+       +     +  EP A GK+  LL     ER+     A P I +     + +    F   + ++   I+   N   +  QL
Sbjct:    9 LPTKIVLLGNPGVGKSTIYNTLLGRRASESGVSIAGGLTNAARSSPLGRFVYVDTPGIDDVYNCKNATREVSAALRGPCRVKLVFVTTLESGRVRSGDLATLATVLDELRHVVGNIDDRYLLIINKCEDSVYNSLLDEFTKVKTRTRVLAPFKALGGISRFALIRREPTASGKANVLLRDTNIERLRDVIVATPTIKLPYNPILHLDFTNFGHCKNEIEEDIKVFYNTYDRALQL 243          
The following BLAST results are available for this feature:
BLAST of Gcaud7788.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J358_9FLOR5.290e-2930.53G domain-containing protein n=1 Tax=Gracilariopsis... [more]
A0A2V3J217_9FLOR9.680e-2331.96AIG1-type G domain-containing protein n=1 Tax=Grac... [more]
A0A225X3J8_9STRA1.120e-2232.51G domain-containing protein n=1 Tax=Phytophthora m... [more]
A0A0L0T1Q2_ALLM34.440e-2228.95G domain-containing protein n=1 Tax=Allomyces macr... [more]
A0A662WJN4_9STRA1.140e-2128.57AAA domain-containing protein n=1 Tax=Nothophytoph... [more]
A0A662X6H2_9STRA9.360e-2128.89G domain-containing protein n=1 Tax=Nothophytophth... [more]
A0A225X4S8_9STRA9.540e-2127.80G domain-containing protein n=1 Tax=Phytophthora m... [more]
W2QQB0_PHYPN1.690e-2028.51G domain-containing protein n=9 Tax=Phytophthora T... [more]
A0A662YA95_9STRA2.540e-2029.09G domain-containing protein n=1 Tax=Nothophytophth... [more]
A0A2V3J228_9FLOR2.890e-2029.79G domain-containing protein n=1 Tax=Gracilariopsis... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 260..292
NoneNo IPR availableCDDcd00882Ras_like_GTPasecoord: 7..126
e-value: 5.32584E-8
score: 49.7624
IPR006703AIG1-type guanine nucleotide-binding (G) domainPFAMPF04548AIG1coord: 4..108
e-value: 6.6E-8
score: 32.1
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 2..148
e-value: 3.3E-15
score: 58.2
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 4..111

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1215_length_12539_cov_3.918139contigNODE_1215_length_12539_cov_3.918139:2825..3985 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7788.t1Gcaud7788.t1Gracilaria caudata M_176_S67 malemRNANODE_1215_length_12539_cov_3.918139 2825..3985 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7788.t1 ID=Gcaud7788.t1|Name=Gcaud7788.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=337bp
MENKVIVLGNPGCGKSTLLNTALGGVYFDSGTSVGHGILPSREEVRDGAT
TYVDTPGLDDPLLRDQAAQYISNQLSREGIVKLVFVMKCDDLRIRGSDQA
ALKMVLDSLQEKGIECDMRFSIIVNQLFDYEINAIREDAAVQTKILSFIN
GGYKVRHVGWLPMEPNAKGKSGALLGCRERILAFFEAAPYIVMGRGMQVD
IKHDRFDEMRAQMSSVIRGLQNDVSKQHQLLQERDSMLVRVKDETKHQLQ
TLKEESLILLRNMELQMQRSRRQTLQKQREEQEAAAAFEREARNPIGSLP
SKGRKRAIFAGACTGATAGAIMGKVIVHLSSSGYLI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006703G_AIG1
IPR027417P-loop_NTPase