Gcaud2071.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2071.t1
Unique NameGcaud2071.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length722
Homology
BLAST of Gcaud2071.t1 vs. uniprot
Match: A0A2V3J1A8_9FLOR (Protein aardvark n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1A8_9FLOR)

HSP 1 Score: 482 bits (1241), Expect = 1.060e-157
Identity = 417/719 (58.00%), Postives = 516/719 (71.77%), Query Frame = 0
Query:    1 MEADLTIVHVRPRTEEERLRDATSEVEARTSIISIPANRISPQTLKLE-PTTPVWENETNSPSEAHTSFSPLSNYSPVSSTKKREHSRRERLKRAAGRICYKHLLNEKHEGDEDGTLVEKVLETMSPTSQISMSGSDRDDGIEKLREAINVHLFPREGEPPERTKNALYLLKKSVNAASDIKGSCIDTVLRLIFETMKNNSMNVPIQEKGCHLLTKLSRDSSQVQTAIVRKGGVRLIIDSMATHSKAPDAQSRAIGALLCLTMDKTARAQILERRGAEMVSWAMREFPDVLLLQKNGSTCLCNLAFNSEESKRRIGRVGGIHAVVSAMNKFVGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLGVYKIATELVRKHMQNASLCEHALTVXXXXXIRSDQNQRNVGGDGGIDLVLSCMKVHRFCKRVVERGCNVLRHLFFDKSNRLRFAECNGVDALVRIMRDGAEHSDVSEAVLFAIGNAIYDNLDSKRAVGRLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMTVFEEGLRQMRVLQASLVVTRSKSMHIDKQMVQCQAEALLTRLKHGSHASGTSIALPKKKISKAVTLRKAASRAAFGKRPKSEAKNLVSRASDDAPCNGKLVQLLGSS 718
            ME +LTIVHVRPRTE ERLRD   + E  + ++SIP++ IS  +L    P +  W  E N  +     F     +  + + +KRE+SRRERLKR AGRI  +  +N  H  +EDG+   +  + +SP SQ S+SGS+ D    K+++A+N  LFP E  P E TK  + ++KKSV+  S+   S ++ +L L+F+ MK N  N  IQ++GC +LT++SRDS   Q AIV KGGV LI+ +M TH+++ + QSRAI ALLCLT D+TAR QI++ RG E++SWAMREF  + LL KNG+TCLCNL+F   ESKRRIGR+GGIH VV+AMNKF  +           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            +LGV  IA +++RK++QN  +CEHALT+     I++D NQ ++G   GI+LVLSC+KVHRF K+VVE+GC  LR+L F K+NR RF E NG+D+LVRIMRDGAEH  VSEAV++ +GNA  DN+DSKRAVGR GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMT  EEG RQ R L+A  VVTRS+ MH+DK MV+ QA+ALL RLK   +A     A PKKK+S   + +K   R   GKR + ++K   +   +DAP   KL+QLLGSS
Sbjct:    2 MEPELTIVHVRPRTEMERLRDVAYDAED-SDLVSIPSDNISLGSLATPVPKSFTWGCENNGANSMLEPFCVKPPHEDIDTPRKRENSRRERLKRTAGRI--RSAMN-LHVENEDGSARLQQNDILSPVSQCSVSGSEDDLSARKVQDAVNKLLFPEEYPPSENTKKTMSIIKKSVSMISEGTESHLELILGLVFDEMKKNPRNELIQDRGCLILTRISRDSKHTQGAIVAKGGVPLIVRAMTTHTRSSNVQSRAISALLCLTTDRTARTQIIDHRGTELISWAMREFSSIPLLLKNGATCLCNLSFGCGESKRRIGRIGGIHVVVNAMNKFPQDADLQARCCLALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCADEWENRMRAAELGVVPIALKILRKNLQNGPMCEHALTLLRNISIQNDHNQVSIGEHDGIELVLSCIKVHRFNKKVVEKGCGTLRYLLFAKANRDRFLESNGIDSLVRIMRDGAEHVSVSEAVIYTVGNATCDNIDSKRAVGRNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMTALEEGWRQARELEAVAVVTRSRCMHLDKSMVRIQADALLKRLKTNPNACA---ACPKKKVSMIDSGQKLGMRVLSGKRSRCDSKGHNTPRQEDAPPTRKLLQLLGSS 713          
BLAST of Gcaud2071.t1 vs. uniprot
Match: A0A1X6P700_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P700_PORUM)

HSP 1 Score: 126 bits (317), Expect = 1.440e-26
Identity = 67/184 (36.41%), Postives = 108/184 (58.70%), Query Frame = 0
Query:  135 SDRDDGIEKLREAINVHLFPREGEPPERTKNALYLLKKSVNAASDIKGSCIDTVLRLIFETMKNNSMNVPIQEKGCHLLTKLSRDSSQVQTAIVRKGGVRLIIDSMATHSKAPDAQSRAIGALLCLTMDKTARAQILERRGAEMVSWAMREFPDVLLLQKNGSTCLCNLAFNSEESKRRIGRVG 318
            S+    I ++++ + V L P +G      + A+ +L+  V+  SD     +   L L++  M ++  +  +QE+ C +L KL+R+   VQ+AI   GGVR +I +M  H ++   Q RA+ ALL LT     R  I++ +GAE V   M+EF D++ +Q NGST LCNLAF S+ +K+RIG++G
Sbjct:   92 SESQRAIVEMKDCLAVLLAPGDGASSNAMREAMAMLRVLVHRRSDPSRERLSVALTLVYRAMDDHLNDGFVQERACLVLGKLAREGPAVQSAIGTSGGVRAVISTMVMHRQSAVVQERAVLALLSLTGTSNTRTLIMDAKGAEAVVCGMKEFSDLVSVQSNGSTTLCNLAFGSDGNKQRIGKIG 275          
The following BLAST results are available for this feature:
BLAST of Gcaud2071.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J1A8_9FLOR1.060e-15758.00Protein aardvark n=1 Tax=Gracilariopsis chorda Tax... [more]
A0A1X6P700_PORUM1.440e-2636.41Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000225ArmadilloSMARTSM00185arm_5coord: 307..349
e-value: 1.1
score: 18.2
coord: 352..393
e-value: 39.0
score: 8.7
coord: 439..481
e-value: 110.0
score: 5.2
coord: 570..612
e-value: 83.0
score: 6.1
coord: 526..568
e-value: 2.8E-6
score: 36.9
coord: 482..524
e-value: 0.96
score: 18.5
coord: 395..437
e-value: 210.0
score: 2.9
IPR000225ArmadilloPFAMPF00514Armcoord: 530..568
e-value: 1.3E-5
score: 25.0
IPR000225ArmadilloPROSITEPS50176ARM_REPEATcoord: 537..581
score: 12.9674
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 505..660
e-value: 1.2E-16
score: 63.0
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 281..504
e-value: 5.4E-30
score: 106.8
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 139..280
e-value: 4.4E-9
score: 37.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 47..90
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 47..79
NoneNo IPR availablePANTHERPTHR22895UNCHARACTERIZEDcoord: 363..481
NoneNo IPR availablePANTHERPTHR22895UNCHARACTERIZEDcoord: 105..348
coord: 471..626
NoneNo IPR availablePANTHERPTHR22895:SF7PROTEIN AARDVARKcoord: 105..348
coord: 471..626
coord: 363..481
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 292..620

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_917_length_16159_cov_4.533047contigNODE_917_length_16159_cov_4.533047:5805..7970 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2071.t1Gcaud2071.t1Gracilaria caudata M_176_S67 malemRNANODE_917_length_16159_cov_4.533047 5805..7970 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2071.t1 ID=Gcaud2071.t1|Name=Gcaud2071.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=722bp
MEADLTIVHVRPRTEEERLRDATSEVEARTSIISIPANRISPQTLKLEPT
TPVWENETNSPSEAHTSFSPLSNYSPVSSTKKREHSRRERLKRAAGRICY
KHLLNEKHEGDEDGTLVEKVLETMSPTSQISMSGSDRDDGIEKLREAINV
HLFPREGEPPERTKNALYLLKKSVNAASDIKGSCIDTVLRLIFETMKNNS
MNVPIQEKGCHLLTKLSRDSSQVQTAIVRKGGVRLIIDSMATHSKAPDAQ
SRAIGALLCLTMDKTARAQILERRGAEMVSWAMREFPDVLLLQKNGSTCL
CNLAFNSEESKRRIGRVGGIHAVVSAMNKFVGEADLQARCCLALRNLTWG
LRANQWIAGRCHAMEAVLQCMRLMKSDMNIQYQGCVALANLCDEEIENRG
RAADLGVYKIATELVRKHMQNASLCEHALTVIRNICIRSDQNQRNVGGDG
GIDLVLSCMKVHRFCKRVVERGCNVLRHLFFDKSNRLRFAECNGVDALVR
IMRDGAEHSDVSEAVLFAIGNAIYDNLDSKRAVGRLGGIPALVEIMSNHL
DSAAIQEHACRALRNLADADELNLRLIIECGAVDAVLLAMMGYLDNGNIQ
EQGCAMLVNMTVFEEGLRQMRVLQASLVVTRSKSMHIDKQMVQCQAEALL
TRLKHGSHASGTSIALPKKKISKAVTLRKAASRAAFGKRPKSEAKNLVSR
ASDDAPCNGKLVQLLGSSGST*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000225Armadillo
IPR011989ARM-like
IPR016024ARM-type_fold