Gcaud8962.t2 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8962.t2
Unique NameGcaud8962.t2
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length964
Homology
BLAST of Gcaud8962.t2 vs. uniprot
Match: A0A2V3J2K8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2K8_9FLOR)

HSP 1 Score: 568 bits (1464), Expect = 3.540e-184
Identity = 378/1007 (37.54%), Postives = 555/1007 (55.11%), Query Frame = 0
Query:    1 MSTTPITKSRPPLIPIQDN--GRTVVSPLVSRITKAPGRFGPTPPKRIREEPERRSPAKPLSRNQGCNYETSTAQDDRDDQGNSKRKKQKGANSKKRVSFGGNSVKIITEHNDGRSTSLSNPGNQVSPRLSNLDQLRTPPLLRRNPALLSGVNDDTDMDTLSATRPPSRISDSPSRFPPRSPLRSSVLSPAQSLSMAERARERQSFGLFYDEDITIAVRGKRIGTPEEDMTQPLRSVGPSPTIRPSDPEDGDVTYTLGYGLHDLMNEARNDAAPISIANQGLKSPKSAK-AVPEQRNLLLDYEDYEDLG-HSPRKENIIGGEPDRNRTLEDGKEEDG-KDSEVQRSIRSP-----DDLEASEAGPLENLGRDNIAE--DCTMENKVLVERRD-VEPSKSLTSTERI-----------------------RSDTEQKGSVPLNEMEGDA--TMEIMPKATSTENPRIESKQQEKVHDLSFESPELPPVLSEMPDSLNQPTIAEQEGLFDSGMASSGPPTSGIGPEAADSQDLSLDELLRRLDVRFDNPTRTPYRDASIAPTDSIPPRFDSASSEFAVYECGKQLYYMERLQLERNRLKEEIASMTVAIKTLEEEINILHPPMVQMLADFKDQSSKRSTEFKCSVKRLQKTCAFEAKEKWVDSRKVWEAAITDQLTMCADVLERDNASCQTHLAHILDLCSKLAEADEPHGPEKNFRDPNQG-----QRLLIRDMSLFKDMRDFNATLDLEKCGLLKKLAVFEPMEMRLSNEREERKQ-MESNPQTLSKRIVERSEEFSTIAGVTGVKITEISANLISLTLCGLAELSFMLHEDRIINTTCKPIRLFGKGHKAKFQALINDAVRMFSSAASVKGVKSIRGIPPMLRKFAYTLMKTQYFLEEACRYYMKHLGMLMSSTVVEVDGNLRQRVLASGMFYSMNLRSHFDIVLSWTVCPTEDGENTYQEVVVEEIRREIGQLPDDEAIRAAIQKGVKMELFSIYDSFQTVWDLL 963
            M TTP+ K RPPLIP+ +N  G    SP  ++  + PG    TP KR R+  + RSP + ++ N  CNYET       DD+G    KK K  +S KRVSFGGNSV+II++++    +       + S     L+++RTPP+ +RNP ++SGVNDD+DMDT SATR P RISDSPSR   R     S  SPA   S   RA  RQSFGLF DED+T+A R  RI    +++TQ L      P   P +PED D+T T+GYGLHD++  AR+D             P S++ A+PEQ  L  +    ED+   +  KE           +L    EE G +   ++ +  +P      D   S +   E+   DN     +C ++  V  +  D  EP  +++S  R                        R+D  + G++       +   T E   + +    P    +  + +H    +SPE    + E  +S  Q   AE +GL  S ++SS    +          D +LD  LR +DVRFDNPTR+  R+AS+AP +S PP+F+ +SSE   YE  K+ Y++E+L+ E+ R+K  I+S   A+K LE+EI  L PPMV+ML  + + S+KR T F+C+VKRL+KT AFEA+ +WV SR+VWE  I D +  C   LE+D    Q   A ++DL  + +E +E    ++N+ +         +R+ +R+MS FKD+R+   T +  K    +K A+ EP+E +LS E  E +  +      L K I+ER E+ S IAGVTG+ +++I+ N I+LT+CGL  L F LHEDR+INT+CKP+    KG+ +  + LI  AV + S A+ ++ VK  R IP +LR+F++ +M+TQ  LEEA RYY  H+G + +S+  E  G+    V  SG FYS++LRS F++V+S T     D  +  ++VV+++I R IG  PDD AI+ AI      + F++YD+F+ VW LL
Sbjct:    1 MPTTPVLKGRPPLIPVSENAWGAPSPSPTEAQKGRTPGSRS-TPAKRNRDTVDSRSPGRMVALNSRCNYETPFV----DDRGG---KKSKILSSGKRVSFGGNSVRIISQNSHDSFSKTLTKDRETSSTYLELERIRTPPISKRNPDMVSGVNDDSDMDTFSATRLPIRISDSPSRANFRKGSDKSPRSPAVRRSSVFRASGRQSFGLFVDEDVTMACRDIRIDPIADEVTQTLPLFPAQPKGEPQEPEDEDITCTIGYGLHDMITGARHDGVLTGNKTSNTSCPSSSEDAIPEQFGLQNEVRSDEDIDPDTQEKERPTSPSESXXESLS---EEHGIQKDHIKTARHAPVSNKRQDHSLSPSNCREDSSIDNATSGSECAVQTGVRGKESDHPEPEGTVSSINRSHPPTNSQHRPLIAPHEDGQERVGRNDVGENGNIGPQPQSAETMHTSEAPTRDSGVIGPSDAIRHPDTLH--GSDSPERLKPVGEALESSGQEATAEYQGLLSSVLSSSESKATEKNSPVHRPADFNLDHHLRGIDVRFDNPTRSVGREASLAPMESFPPKFEQSSSELNSYELMKERYFLEQLRREKKRIKTTISSTREAVKALEKEIETLRPPMVEMLTKYDEHSTKRITAFQCAVKRLRKTSAFEARGEWVASRRVWEKEICDGMDQCCTTLEKDLERTQAKKASVVDLADRFSELEELSHIQRNYEEEGMETLPVVRRIFLREMSQFKDIREAVITEECYKKDAQRKQALLEPLEAKLSRECSELESYVGKGSPALRKMILERHEQSSIIAGVTGISLSKINTNSIALTICGLVNLHFSLHEDRVINTSCKPVSFINKGNTSVLKNLIEGAVTLSSFASRIRAVKMARDIPMVLRRFSHMMMRTQCLLEEAHRYYEIHMGSITNSSTTENGGSPSLHVDLSGCFYSVSLRSQFNVVVSITFRSVRDCTDIQEKVVLKDITRTIGDRPDDNAIQEAILSATGEKPFNLYDAFEAVWGLL 994          
The following BLAST results are available for this feature:
BLAST of Gcaud8962.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J2K8_9FLOR3.540e-18437.54Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 548..575
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 307..403
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 71..85
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 94..132
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 364..398
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 307..347
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 153..191
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..196
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 464..492
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 42..56

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_8_length_96899_cov_4.406888contigNODE_8_length_96899_cov_4.406888:41409..44300 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8962.t2Gcaud8962.t2Gracilaria caudata M_176_S67 malemRNANODE_8_length_96899_cov_4.406888 41409..44300 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8962.t2 ID=Gcaud8962.t2|Name=Gcaud8962.t2|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=964bp
MSTTPITKSRPPLIPIQDNGRTVVSPLVSRITKAPGRFGPTPPKRIREEP
ERRSPAKPLSRNQGCNYETSTAQDDRDDQGNSKRKKQKGANSKKRVSFGG
NSVKIITEHNDGRSTSLSNPGNQVSPRLSNLDQLRTPPLLRRNPALLSGV
NDDTDMDTLSATRPPSRISDSPSRFPPRSPLRSSVLSPAQSLSMAERARE
RQSFGLFYDEDITIAVRGKRIGTPEEDMTQPLRSVGPSPTIRPSDPEDGD
VTYTLGYGLHDLMNEARNDAAPISIANQGLKSPKSAKAVPEQRNLLLDYE
DYEDLGHSPRKENIIGGEPDRNRTLEDGKEEDGKDSEVQRSIRSPDDLEA
SEAGPLENLGRDNIAEDCTMENKVLVERRDVEPSKSLTSTERIRSDTEQK
GSVPLNEMEGDATMEIMPKATSTENPRIESKQQEKVHDLSFESPELPPVL
SEMPDSLNQPTIAEQEGLFDSGMASSGPPTSGIGPEAADSQDLSLDELLR
RLDVRFDNPTRTPYRDASIAPTDSIPPRFDSASSEFAVYECGKQLYYMER
LQLERNRLKEEIASMTVAIKTLEEEINILHPPMVQMLADFKDQSSKRSTE
FKCSVKRLQKTCAFEAKEKWVDSRKVWEAAITDQLTMCADVLERDNASCQ
THLAHILDLCSKLAEADEPHGPEKNFRDPNQGQRLLIRDMSLFKDMRDFN
ATLDLEKCGLLKKLAVFEPMEMRLSNEREERKQMESNPQTLSKRIVERSE
EFSTIAGVTGVKITEISANLISLTLCGLAELSFMLHEDRIINTTCKPIRL
FGKGHKAKFQALINDAVRMFSSAASVKGVKSIRGIPPMLRKFAYTLMKTQ
YFLEEACRYYMKHLGMLMSSTVVEVDGNLRQRVLASGMFYSMNLRSHFDI
VLSWTVCPTEDGENTYQEVVVEEIRREIGQLPDDEAIRAAIQKGVKMELF
SIYDSFQTVWDLL*
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