Gcaud2122.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2122.t1
Unique NameGcaud2122.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length157
Homology
The following BLAST results are available for this feature:
BLAST of Gcaud2122.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 105..125
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 94..104
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 71..93
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 126..156
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..70
NoneNo IPR availableTMHMMTMhelixcoord: 72..94
NoneNo IPR availableTMHMMTMhelixcoord: 104..126

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1213_length_12574_cov_4.799648contigNODE_1213_length_12574_cov_4.799648:6253..6723 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2122.t1Gcaud2122.t1Gracilaria caudata M_176_S67 malemRNANODE_1213_length_12574_cov_4.799648 6253..6723 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2122.t1 ID=Gcaud2122.t1|Name=Gcaud2122.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=157bp
MHRVLRTDKSADEMDGLLHQLDGSVKLINARLQKLVSEQTPLLETPPEAK
AALNSKLQSHPVMRAYRMVEVIFNTAGFLSVAVPAIISIVSSITVSVQEQ
AHEAVILDVTGVATGVSGPVATILVGRRVLNYMRSAIRTVIWHEANRIRD
EVVEDV*
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