Gcaud1670.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1670.t1
Unique NameGcaud1670.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length445
Homology
BLAST of Gcaud1670.t1 vs. uniprot
Match: A0A2V3IYX2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYX2_9FLOR)

HSP 1 Score: 97.4 bits (241), Expect = 2.430e-18
Identity = 110/420 (26.19%), Postives = 185/420 (44.05%), Query Frame = 0
Query:   47 TGNAPSLSPASNQMGLLPVHRPIPSPSGLNASDDFLELLKTNASQLGELQSQGAEGVEDNGVASDASILTRSISEVTMDMLHRTPFANVAKHETDGSMSVPNGFVGYGQPAQAPSTINAIQMVRQENLMPTPPLQQTANASQYGTANATAALTKGLLMQ------EGKFFSLPFKPGH-----------GGAGPEAQPAEVKLMKAAEPRTPQAIVQPPDDVHGVAHAHPLPSGLPSGTLQAAKQNNGDKLLPGVPAKRSRGGAVVRRVLKRMGKSNSDVPSLLSSV--------CDEQTKSSSTEVKHQFDAEEKRGKK----RKIENAENXXXXXXXXXXXXXXXXXXXXXXXXXXLEKLEEEDRALRSECEIMRQMAEVFQEKWKQVAEEYHKICGKEAGECPMVIPPNTTLPEAAT 437
            T  +PS+S    Q+  +PV     SP+  +  D+ + LLK   +   E  +   E    N   S++    R+ISEVT+  LH+T + +  K+ +  +  +P+            S        RQ + M T      A+ + +GT        +  +M       +    + P +P             G A P +     K  + A        V  P+ +       P  + +PSG LQ A++ + D  + G   +  +GGAVV+RVLKR+ KSNS++   ++ +          +QT++   +V+ +   EEK  ++    R++ N E+                          LEKLE+E++ALR+EC +M Q+AE  Q  W  VA E+ +I GKEAG CP+++PP+  L + +T
Sbjct:   51 TPKSPSIS--LRQLDFVPVDPLTLSPTVWSKHDNTVLLLKPQTNSFLEHSAAQPEYHRQNLSPSESPGADRTISEVTIAGLHQTSYKS--KNVSMNAKPLPS------------SRTLCFTPQRQLHSMMTNDGTPVAHRNSFGTGLPHPQAGRRSIMPWTAEECDIPIHTFPSQPRKRTEVTSCRDLWGNASPLSSLHTDKDSRYAN-------VPQPEILQDAGGKFPASALIPSGILQTAQKTHRD--INGERKQAPKGGAVVQRVLKRIAKSNSNISETINRLKVMPMHQHVSKQTRNDEKQVRKRITTEEKNEEELKKIRRVRNRESVEKCRAKQKLR---------------LEKLEKEEKALRAECILMSQVAESLQRNWAAVAMEFERITGKEAGRCPLIMPPDVGLADMST 430          
BLAST of Gcaud1670.t1 vs. uniprot
Match: A0A2V3IGR2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGR2_9FLOR)

HSP 1 Score: 70.5 bits (171), Expect = 1.830e-9
Identity = 91/228 (39.91%), Postives = 126/228 (55.26%), Query Frame = 0
Query:  222 GPEAQPAEVKLM---KAAEPRTPQAIVQPPDDVHGVAHAHPLPSGLPSGTLQA----AKQNNGDKLLPGVPAKRSRGGAVVRRVLKRMGKSNSDVPSLLSSVCDEQTKSSSTEVKHQFDAEEKRGKKRKIENAENXXXXXXXXXXXXXXXXXXXXXXXXXXLEKLEEEDRALRSECEIMRQMAEVFQEKWKQVAEEYHKICGKEAGECPMVIPPNTTLPEAATLSAAE 442
            G +AQP+ + +    + + P  P  ++     ++G + +   P+ +  G LQ     A + N +  +  +P     G A  RRVL+R+ ++N     +  SV +     +ST        EE+RG+KRK    E XXXXXXXXXXXXXXXXXXXXXXXXXX           R EC +MR++AE  Q KW  +A EY +I GKEAGECPM IPP+  LPE  T+S  +
Sbjct:  222 GAQAQPSLLPISHESRVSAPAPPPRLL-----LNGASSSCNGPTLISGGVLQPTPRPAPEGNVNAEMRHMP----NGAASFRRVLRRIARTNPGTHRV--SVGEIDAHGAST-------VEERRGRKRKATEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRQECILMREVAESIQSKWAAIAAEYKRITGKEAGECPMSIPPDIVLPELTTMSGCD 431          
The following BLAST results are available for this feature:
BLAST of Gcaud1670.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IYX2_9FLOR2.430e-1826.19Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IGR2_9FLOR1.830e-939.91Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 330..396
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 39..59
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availableCDDcd14686bZIPcoord: 354..403
e-value: 2.52154E-7
score: 45.2289
NoneNo IPR availableSUPERFAMILY57959Leucine zipper domaincoord: 354..406
IPR004827Basic-leucine zipper domainPROSITEPS50217BZIPcoord: 351..414
score: 8.530589

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_860_length_16952_cov_4.432299contigNODE_860_length_16952_cov_4.432299:10688..12022 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1670.t1Gcaud1670.t1Gracilaria caudata M_176_S67 malemRNANODE_860_length_16952_cov_4.432299 10688..12022 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1670.t1 ID=Gcaud1670.t1|Name=Gcaud1670.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=445bp
MSNPNDFLNFEPSTDPLSELPSQGLLEYLNNASTQDGGLINVSGSGTGNA
PSLSPASNQMGLLPVHRPIPSPSGLNASDDFLELLKTNASQLGELQSQGA
EGVEDNGVASDASILTRSISEVTMDMLHRTPFANVAKHETDGSMSVPNGF
VGYGQPAQAPSTINAIQMVRQENLMPTPPLQQTANASQYGTANATAALTK
GLLMQEGKFFSLPFKPGHGGAGPEAQPAEVKLMKAAEPRTPQAIVQPPDD
VHGVAHAHPLPSGLPSGTLQAAKQNNGDKLLPGVPAKRSRGGAVVRRVLK
RMGKSNSDVPSLLSSVCDEQTKSSSTEVKHQFDAEEKRGKKRKIENAENE
EELKKLRRVRNRESVEKCRAKQRIRLEKLEEEDRALRSECEIMRQMAEVF
QEKWKQVAEEYHKICGKEAGECPMVIPPNTTLPEAATLSAAERS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004827bZIP