Gcaud1702.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1702.t1
Unique NameGcaud1702.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length129
Homology
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BLAST of Gcaud1702.t1 vs. uniprot
Match: A0A2V3J4Q2_9FLOR (Structural maintenance of chromosomes protein 6 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4Q2_9FLOR)

HSP 1 Score: 96.7 bits (239), Expect = 9.210e-21
Identity = 54/107 (50.47%), Postives = 72/107 (67.29%), Query Frame = 0 
Query:    2 FNRTFQEIRRNIIRVETQLKNHKRRLIEINAEADEGDKRTKDTNLRMEQARKEHFAGQEQKSRLVEEFQYLELKEKELHDTIQNVATKEAGYLEQKYYKEQAVQRAK 108
            FN+T+Q+ RR II+VET +K+H                     N RMEQARK+HFAGQEQKSRL++E Q L+++EKEL++TIQ+   K++  LE KYYKEQ +Q AK
Sbjct:  443 FNKTYQDTRRQIIKVETDIKSHXXXXXXXXXXXXXXXXXXXXXNARMEQARKDHFAGQEQKSRLIQELQSLDMREKELNETIQSSQAKDSALLEDKYYKEQNLQNAK 549
The following BLAST results are available for this feature:
BLAST of Gcaud1702.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J4Q2_9FLOR9.210e-2150.47Structural maintenance of chromosomes protein 6 n=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 6..40

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_852_length_17021_cov_7.154341contigNODE_852_length_17021_cov_7.154341:10943..11329 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1702.t1Gcaud1702.t1Gracilaria caudata M_176_S67 malemRNANODE_852_length_17021_cov_7.154341 10943..11329 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1702.t1 ID=Gcaud1702.t1|Name=Gcaud1702.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=129bp
MFNRTFQEIRRNIIRVETQLKNHKRRLIEINAEADEGDKRTKDTNLRMEQ
ARKEHFAGQEQKSRLVEEFQYLELKEKELHDTIQNVATKEAGYLEQKYYK
EQAVQRAKRCLDFTLATSLFMFSNDSVK*
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