Gcaud1703.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1703.t1
Unique NameGcaud1703.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length135
Homology
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BLAST of Gcaud1703.t1 vs. uniprot
Match: A0A2V3J4Q2_9FLOR (Structural maintenance of chromosomes protein 6 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4Q2_9FLOR)

HSP 1 Score: 169 bits (429), Expect = 2.790e-46
Identity = 87/133 (65.41%), Postives = 111/133 (83.46%), Query Frame = 0 
Query:    1 LAGQKLTKHKQFYQQATLLGPLEDELKMAIGVTEDIRVILRRTKDAIPVADRKLAKLEAEYRKAEAMKNIDKTIRDAEIPSAWVIVHEADEKHLGYERRTHEEIARRAEQLITEFERIGRKLDTVTAERDSRH 133
            LAGQK T+H QFY++ATLLGPLE+ELKM I VTEDIR ILRRT++ +P +DRKLAKLEA YR +EAMKNID+TIR+AEI SAWVIV E D+K L YE++TH++IA RAE+L  E +R G+KL++ +++RD  H
Sbjct:  298 LAGQKPTQHFQFYREATLLGPLEEELKMTIKVTEDIRDILRRTEEGMPESDRKLAKLEANYRDSEAMKNIDRTIRNAEILSAWVIVQETDKKRLEYEQKTHDDIAPRAEKLSFEVDRTGKKLESFSSQRDDLH 430
The following BLAST results are available for this feature:
BLAST of Gcaud1703.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J4Q2_9FLOR2.790e-4665.41Structural maintenance of chromosomes protein 6 n=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 40..67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_852_length_17021_cov_7.154341contigNODE_852_length_17021_cov_7.154341:11357..11761 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1703.t1Gcaud1703.t1Gracilaria caudata M_176_S67 malemRNANODE_852_length_17021_cov_7.154341 11357..11761 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1703.t1 ID=Gcaud1703.t1|Name=Gcaud1703.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=135bp
LAGQKLTKHKQFYQQATLLGPLEDELKMAIGVTEDIRVILRRTKDAIPVA
DRKLAKLEAEYRKAEAMKNIDKTIRDAEIPSAWVIVHEADEKHLGYERRT
HEEIARRAEQLITEFERIGRKLDTVTAERDSRHL*
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