Gcaud6806.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud6806.t1
Unique NameGcaud6806.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length348
Homology
BLAST of Gcaud6806.t1 vs. uniprot
Match: A0A2V3IGC8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGC8_9FLOR)

HSP 1 Score: 422 bits (1086), Expect = 5.340e-141
Identity = 211/344 (61.34%), Postives = 260/344 (75.58%), Query Frame = 0
Query:    1 MELRLVAVKMARVLNHQKDGPCDDSRVDAYHVRHIPNYLHATRPFSKVIQPQRDLYGFPTDQALQADFVNTMRLCYGTRKLRRPVKAQKLSKRDEQLRQEWERCKDAMLRWLQMGNPEDLDNVAWTAFSPDAISNTKGTRLRELAQLVDDIHAEKGEHDPQLWAPFVNAFREIGEQDGEHVHMDFENSDVAHVVEQTECMYDADRVCPGLTDSVNVAVRNMSEQRRLLDSLDLRDAHGKPVSREPLRRWQRPRASKTRPLRNRRRLYSKIGSSYDYFFEPAGIGLAWTIMNRFFSGNNVVLEGMKLTQSVDVHDDQMRRACDRTLGVVIRYILGLKAVRGADEG 344
            MELRL+AVKMARVLN ++ GP DDSR+D+YHV HIPNYL+ TRPFSKVI+ +RDLYGFPTDQ+LQ DF+NTMR+CY  RKLR  VK ++LS ++E  RQEWE+CK AMLRWL +G+ ED+DNV WTA SP+ IS  KG ++R  A+LVD+IH EKGE +P+LW   VNAF+EIGE  G    M FE S+    V + ECMYD +R+  G+   V   V +M E+R LLDSLDLR   G+PV R P+R+W +   +  R +RNR+ LY K+ S YDY +EP G+GLAWTIM RFFSG+NVVLEGMK TQ+ DV+ DQMR+ACDRTLGVVIRYILGLK   G  +G
Sbjct:  284 MELRLIAVKMARVLNGEQGGPWDDSRLDSYHVNHIPNYLYLTRPFSKVIRAERDLYGFPTDQSLQVDFINTMRICYCRRKLRPNVKKEELSNKEETFRQEWEQCKTAMLRWLNVGSVEDIDNVGWTALSPEVISTMKGRQIRAFAKLVDEIHLEKGEDEPELWGRLVNAFKEIGES-GSDDEMAFEMSEQYGAVVERECMYDLNRIEDGMNARVEREVADMIEERELLDSLDLRTEQGEPVERGPIRQWDKYHPANQRSIRNRKGLYRKLVSKYDYVWEPQGMGLAWTIMFRFFSGSNVVLEGMKATQNEDVYVDQMRKACDRTLGVVIRYILGLKGGGGEMKG 626          
BLAST of Gcaud6806.t1 vs. uniprot
Match: R7Q345_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q345_CHOCR)

HSP 1 Score: 151 bits (382), Expect = 2.340e-37
Identity = 113/379 (29.82%), Postives = 181/379 (47.76%), Query Frame = 0
Query:    1 MELRLVAVKMARVLNHQKDGPCDDSRVDAYHVRHIPNYLHATRPFSKVIQPQRDLYGFPTDQALQADFVNTMRLCYGTRKLRRPVKAQKLSKRDEQLRQEWERCKDAMLRWLQMGNPEDLDNVAWTAFSPDAISNTKGTRLRELAQLVDDIHAEKGEHDPQLWAPFVNAFREIGE---------QDGEHVHM------DFENSDVAHVVE-----QTECMYDADRVCPGLTDSVNVAVRNMSEQRRLLDSLDLRDAHGK---PVSREPLRRWQRPRASKTRP------------LRNRRRLYSKIGSSYDYFFEPAGIGLAWTIMNRFFSGNNVVLEGMKLTQSVDVHDDQMRRACDRTLGVVIRYILGLKA-VRGADE 343
            +ELR +A +M       +D   ++  +D   +    N         K+ +    L  FPTD ++Q DF+NTMRLCYGT +     K  +    + +LR+EWE C +AM  WL++GNPED++ V WT  +P  +S+TKG  +R  A +VD++  + GE  P+LW  +V AF EIG+         ++G            FE+     + E       EC YD   V  G T      +  M +  R  +S+   +  GK   P  R      +    +K RP            +  ++   +   S  ++  EP GIGL+WTI+  FF+G+NVV+  + + +      + + +AC+  + +VI Y+L LK  VR A++
Sbjct:  281 IELRRIASRMCSAALEARDKWWEEQAMDTVVLG--DNLREEREGLPKIARKTAYLNEFPTDASVQVDFINTMRLCYGTSR----KKTDERETTNRELRKEWENCMEAMETWLRIGNPEDIEYVQWTPKTPSELSHTKGEEIRSYADMVDNLLTDMGESTPELWGKYVAAFAEIGDSWQPDKDRNEEGNRKRTCVYDVKPFESRVRCKIQEGKEEMDNECGYD---VLTG-TRHERQPLIEMKDVLRQRESMKKNEKIGKRKLPEHRAASAGEKSGDITKVRPNTDPAAKCYAENIEIKKEPDTHRASREEFLKEPMGIGLSWTILRHFFAGSNVVVGDLHIERLPSFVQNGLLQACNSAMKMVIMYVLWLKGKVRHAED 649          
The following BLAST results are available for this feature:
BLAST of Gcaud6806.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IGC8_9FLOR5.340e-14161.34Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q345_CHOCR2.340e-3729.82Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_847_length_17063_cov_4.088675contigNODE_847_length_17063_cov_4.088675:11755..12798 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud6806.t1Gcaud6806.t1Gracilaria caudata M_176_S67 malemRNANODE_847_length_17063_cov_4.088675 11755..12798 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud6806.t1 ID=Gcaud6806.t1|Name=Gcaud6806.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=348bp
MELRLVAVKMARVLNHQKDGPCDDSRVDAYHVRHIPNYLHATRPFSKVIQ
PQRDLYGFPTDQALQADFVNTMRLCYGTRKLRRPVKAQKLSKRDEQLRQE
WERCKDAMLRWLQMGNPEDLDNVAWTAFSPDAISNTKGTRLRELAQLVDD
IHAEKGEHDPQLWAPFVNAFREIGEQDGEHVHMDFENSDVAHVVEQTECM
YDADRVCPGLTDSVNVAVRNMSEQRRLLDSLDLRDAHGKPVSREPLRRWQ
RPRASKTRPLRNRRRLYSKIGSSYDYFFEPAGIGLAWTIMNRFFSGNNVV
LEGMKLTQSVDVHDDQMRRACDRTLGVVIRYILGLKAVRGADEGFAD*
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