Gcaud2306.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2306.t1
Unique NameGcaud2306.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length344
Homology
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BLAST of Gcaud2306.t1 vs. uniprot
Match: A0A2V3ITB8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITB8_9FLOR)

HSP 1 Score: 497 bits (1280), Expect = 5.310e-175
Identity = 251/322 (77.95%), Postives = 280/322 (86.96%), Query Frame = 0 
Query:   22 FASLPAYEFDFDYRGQSLNTAMPPLHTPSSLVDDFDSYMFPDTDTTHSSSQRSQSSQPFSNTLHPSPSSIDWAAVQHAQLFSPKGSIIDVDKLYTGYCKFSVLIFVPRHAVELCALVYGKVAHLLLQAGARLCFITAWQPAQAALFLSRFERVSPCPATIVCDPHAHLFSAFAFTRSPLRALFAANKVSAPMRQGMRNAFSTVSYRAQNRDIANTTVPSKRLKCGAVVMSTLRGYEKRPYIYYISEEHPSTGVGCYMDVLSACGVNEAFVPDVDVAQVYARFNNMRSTSIKARHADEKEANRLKNHRLRGSRKNDLRNALKG 343
            FA+LP YEFDFDYRGQSL  + P L+T SSLVDDFDSYMFPD++       +  +++P S       S+IDW+AV+ AQL++P  S ++ DKLYTGYC FSVL+FVPRHAVELCALVYGKVAHLLLQAGARLCFITAWQP QA LFLSRFERVSP P  IVCDPH HLFSAFAFTRSPLRALFAAN++SAPMRQGMRNAFSTV+YRAQNRDIANT VPSKRLKCGAVV+  LRGYEKRP ++YIS+EHPSTGVGCYMDVLSACGVNEAFVP VDVAQVY+RFNNMR+TSIKARHADEKEANRLK+HR+RGS K D+RNALKG
Sbjct:   15 FATLPPYEFDFDYRGQSLRPSPPHLNTASSLVDDFDSYMFPDSEL----DVKRLATEPPSQLP---TSTIDWSAVEAAQLYTPDASPLEPDKLYTGYCNFSVLVFVPRHAVELCALVYGKVAHLLLQAGARLCFITAWQPTQARLFLSRFERVSPFPGAIVCDPHGHLFSAFAFTRSPLRALFAANRLSAPMRQGMRNAFSTVTYRAQNRDIANTPVPSKRLKCGAVVLPNLRGYEKRPAVHYISDEHPSTGVGCYMDVLSACGVNEAFVPHVDVAQVYSRFNNMRATSIKARHADEKEANRLKHHRVRGSGKRDIRNALKG 329
The following BLAST results are available for this feature:
BLAST of Gcaud2306.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3ITB8_9FLOR5.310e-17577.95Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_838_length_17196_cov_5.011166contigNODE_838_length_17196_cov_5.011166:6812..7843 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2306.t1Gcaud2306.t1Gracilaria caudata M_176_S67 malemRNANODE_838_length_17196_cov_5.011166 6812..7843 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2306.t1 ID=Gcaud2306.t1|Name=Gcaud2306.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=344bp
MSHDSAAQHTPPALTATAFGAFASLPAYEFDFDYRGQSLNTAMPPLHTPS
SLVDDFDSYMFPDTDTTHSSSQRSQSSQPFSNTLHPSPSSIDWAAVQHAQ
LFSPKGSIIDVDKLYTGYCKFSVLIFVPRHAVELCALVYGKVAHLLLQAG
ARLCFITAWQPAQAALFLSRFERVSPCPATIVCDPHAHLFSAFAFTRSPL
RALFAANKVSAPMRQGMRNAFSTVSYRAQNRDIANTTVPSKRLKCGAVVM
STLRGYEKRPYIYYISEEHPSTGVGCYMDVLSACGVNEAFVPDVDVAQVY
ARFNNMRSTSIKARHADEKEANRLKNHRLRGSRKNDLRNALKG*
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