Gcaud1772.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1772.t1
Unique NameGcaud1772.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length143
Homology
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BLAST of Gcaud1772.t1 vs. uniprot
Match: A0A2V3IKT9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKT9_9FLOR)

HSP 1 Score: 58.9 bits (141), Expect = 6.110e-8
Identity = 34/115 (29.57%), Postives = 63/115 (54.78%), Query Frame = 0 
Query:    5 RDDLTVPDLQFLGMHVSSAALEEASNEDFFSTEVKFHLGDEFTSTLAHAVLKYGSVAESASRITRGMRECILGNTQHQEGLPFQEVLHVKRALAALLDVTTKALSSMGRDWEHAK 119
            +D   +P L F+GM V SA L  ++  +  +  +     D  +S +   +LKYGSVAE+ SR++R +R C+L  +Q  +    ++   +   +  +  ++ +A+SS+  DWE +K
Sbjct:   56 QDHEEIPSLNFIGMPVPSAVLLNSACLEQHTECLTSMFTDSDSSEMIPLLLKYGSVAETLSRLSRTLRACLLDYSQLPQEPSSEQAAKLISIILPMSALSKRAMSSVESDWEKSK 170
The following BLAST results are available for this feature:
BLAST of Gcaud1772.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IKT9_9FLOR6.110e-829.57Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_837_length_17206_cov_4.413380contigNODE_837_length_17206_cov_4.413380:10486..10914 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1772.t1Gcaud1772.t1Gracilaria caudata M_176_S67 malemRNANODE_837_length_17206_cov_4.413380 10486..10914 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1772.t1 ID=Gcaud1772.t1|Name=Gcaud1772.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=143bp
MDGIRDDLTVPDLQFLGMHVSSAALEEASNEDFFSTEVKFHLGDEFTSTL
AHAVLKYGSVAESASRITRGMRECILGNTQHQEGLPFQEVLHVKRALAAL
LDVTTKALSSMGRDWEHAKRLSFGDANLFSEEQFNSSTSTSE*
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