Gcaud2385.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2385.t1
Unique NameGcaud2385.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length866
Homology
BLAST of Gcaud2385.t1 vs. uniprot
Match: A0A2V3J259_9FLOR (Pre-mRNA-splicing factor CWC22 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J259_9FLOR)

HSP 1 Score: 868 bits (2242), Expect = 2.270e-304
Identity = 493/759 (64.95%), Postives = 579/759 (76.28%), Query Frame = 0
Query:    4 MATPTQTVRLATPPVPSSSRPPXXXXXXXXXPPPYIPPFRARRLAAVSSPQNSQLQHWTRLKKSIHGTVNRLNASNLPHCVIDLFRLNLVRARGLFCKAILRAQVASPNLSPIFACFVAVVGSRFPVIVNLLLRRLVAQLKTAYRNQDRASCFATARFLANLYNQHVIKDLLVLEFLCLCTVDPSDSSAELTVVTLRECAVTLYQNSPDALEFVFQKLRAMLHDGHLGRRAQVAIENLLILRRNKFRDLPSTDSRLDLLHEKDIFTHDITLEEDLGDLEYECDNFQFDRKYEENEKIYSEIKKQILGAAMDQMPQGLTEDPGRPQSDKSSNPTSQTXXXXXXXXXXXXXXXXXXXXXXXX-QNFRRTVYLTHNATLSADESAHRLFLLMRDNKGREAELCRMIVECCGQESSFQKVYGNLAHRICYCDRSYRAHFEELFADHYATIHRFDTRKIRIIAHLFAFMLAEEAISWNILEVVRIVEEETTASSRTFLKYLFQQVRENMGKAKTKERFSRAEKDGNLRGVFPTDCAKNARFSINMFTTIGLGFLTDGLRDKLKDLPDQAVXXXXXXXXXXXXXXXXXXXXXXLSPSVGDEHPQGDISDDNITRGSKRPQDEVSRQESERPTKVRRLERSASRRGELESRRRRDIRQNIELDDIERNHRAYVNSSSGSRSRRYAPEQSDEEERDYRSKRRQNQYSSYRGEGRHRDRYRSSRLASHEXXXXXXXXXXXXXXXLRRPASRDXXGRHRSDLEEYERDR 761
            MA PTQT+RL TPPVPSSSRP XXXXXXXX P PYIPPFRA+RL  V+SP+  QLQHWT LKK+I+G VNRLNASNLP CVI L RLN+VRARGLFCKA+LRAQ+ASPNLSP+FA FVAV+GSRFP IVNLL+RRLVAQL+ AY NQDR SCFATARFLANL NQ+V+K++LVLEFL    ++PSD SAEL VVTLREC  TLYQ SP ALE VF KLRAMLHDG LGRRA+VAI+NLL LRR KFR LPS D RLDLLH+KDIFTHDITLEEDLGDL++ECD FQFD  +E+NE  Y  IKK ILGAAMD +PQGL+EDP RPQSDKSS PT Q                          Q FRRTVYL H++TLS +ESAHRL +LMRDNKGRE +LC+M++ECC QE +F +VYG L+ R+C  DR Y  HFE+LFA HYATIHRF+TR+IR IA+LFAF+LA ++ISW++LEVVRIVEEETTASSR FLK+L Q++  ++G+A  +ERF +AE+DGNL GVFPTD   NA+FSIN+ TTIGLG+LT+GLR+KLKDLP +A              XXXXXXXXXLS   G+E  Q  IS+DN +RGSKRPQD  SR ESERPTK RR++  + RR   +S+RRRD R+N+  DDIERNHRAYVNS SGSR+RRYAPE SDE+   YRSKR +++Y SY  + R RD YRSSR  S +                RR +SRD      SD+E++ER+R
Sbjct:    1 MAAPTQTIRLPTPPVPSSSRPXXXXXXXXXQPAPYIPPFRAKRLPTVASPKQLQLQHWTGLKKAINGIVNRLNASNLPSCVIQLLRLNIVRARGLFCKAVLRAQLASPNLSPVFASFVAVIGSRFPAIVNLLVRRLVAQLRAAYGNQDRISCFATARFLANLCNQYVVKEILVLEFLLTWALEPSDGSAELAVVTLRECVSTLYQESPPALELVFDKLRAMLHDGQLGRRAEVAIDNLLDLRRKKFRGLPSPDPRLDLLHDKDIFTHDITLEEDLGDLQHECDKFQFDPNFEQNENAYESIKKDILGAAMDNLPQGLSEDPNRPQSDKSSKPTIQAENTAAGSLNKDPMPSKTTDMTEAELQQFRRTVYLIHSSTLSHEESAHRLLILMRDNKGREHDLCQMLIECCSQEKTFLRVYGLLSDRLCRRDRVYHTHFEDLFATHYATIHRFETRRIRNIANLFAFLLAADSISWSVLEVVRIVEEETTASSRAFLKFLMQELCRSLGEAGARERFKKAERDGNLTGVFPTDNVTNAKFSINLLTTIGLGYLTEGLREKLKDLPKKA-NDDDAENTSSSSFXXXXXXXXXLSIDSGEEVAQVGISNDNESRGSKRPQDPASRAESERPTKSRRIDDPSIRRDRFDSQRRRDARRNMPFDDIERNHRAYVNSPSGSRTRRYAPEHSDEDRARYRSKRHRSRYGSYHDDRRSRDVYRSSRPPSRDHRDRYWSDDDAP----RRASSRDRNEGRPSDMEDFERNR 754          
BLAST of Gcaud2385.t1 vs. uniprot
Match: R7Q616_CHOCR (MI domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q616_CHOCR)

HSP 1 Score: 415 bits (1067), Expect = 2.350e-129
Identity = 232/535 (43.36%), Postives = 315/535 (58.88%), Query Frame = 0
Query:   37 PYIPPFRARRLAAVSSPQNS--------QLQHWTRLKKSIHGTVNRLNASNLPHCVIDLFRLNLVRARGLFCKAILRAQVASPNLSPIFACFVAVVGSRFPVIVNLLLRRLVAQLKTAYRNQDRASCFATARFLANLYNQHVIKDLLVLEFLCLCTVDPSDSSAELTVVTLRECAVTLYQNSPDALEFVFQKLRAMLHDGHLGRRAQVAIENLLILRRNKFRDLPSTDSRLDLLHEKDIFTHDITLEEDLGDLEYECDNFQFDRKYEENEKIYSEIKKQILGAAMDQMPQGLTEDPGRPQSDKSSNPTSQTXXXXXXXXXXXXXXXXXXXXXXXXQNFRRTVYLTHNATLSADESAHRLFLLMRDNKGREAELCRMIVECCGQESSFQKVYGNLAHRICYCDRSYRAHFEELFADHYATIHRFDTRKIRIIAHLFAFMLAEEAISWNILEVVRIVEEETTASSRTFLKYLFQQVRENMGKAKTKERFSRAEKDGNLRGVFPTDCAKNARFSINMFTTIGLGFLTDGLRDKLKDLP 563
            PY+PPFR  RL A   P+          Q   W RL K+IHG +NR++  N+      L R+N+ RARG+ CK +LR Q+ SP L+PI A  ++V+ +R P +++LL+ RL+AQL  AY  QDR+ CFATA+F+A L N  VI DL V EFL +C +D +D S EL V  L ECA  L   SP   E  F +LR +LHDG +  R Q  I  L+  RR  F    + D R DL+HE DI THD++L +D   LE +CD F FD+ Y ENE+ Y EIK+ ILG   D+          RP  D SS    +                         + FRRTVYL   + ++++E AH+L  LMRDN+GR+ +LC MIVE C +E +F +  G L  R+C  +RSY + FE  FA HYA IHR   R+IR++A  + FMLA  A+ WN+  VVR+V  ETT SSR FLK+LFQ++   +  ++  E F   E+  +L+G+FP+D   NA+++IN F  IG+GFLT  LR+ LK+ P
Sbjct:   42 PYVPPFRRARLKASHFPRKDMAPGSEPRQRDDWNRLVKTIHGDINRVSEDNISEIAKSLLRVNIFRARGILCKTLLRVQLGSPPLAPILASLISVLNTRVPAVIDLLVSRLIAQLGNAYDVQDRSLCFATAKFMAALCNHQVISDLPVFEFLRVCLLDRTDGSVELAVSMLDECAPFLSDRSPKLSEDGFDRLREVLHDGDVSTRTQEMIRRLMTRRRKNFAGQDTLDPRFDLVHEADIITHDVSLNDDTR-LELQCDAFLFDKVYVENERQYEEIKRDILGVEADR-------SLSRPSDDNSSFTNEKGDVVEEELGKSKGVEKTTDMTDAALREFRRTVYLVLTSGITSEEWAHKLVRLMRDNQGRKRDLCEMIVEYCSREKTFSRSIGLLGERLCSLERSYVSGFEWTFAKHYAGIHRHGEREIRLMATFYGFMLASNALPWNVFGVVRLVAAETTTSSRVFLKHLFQEIYYTLSSSQMMELFKSPERAESLKGLFPSDTVANAQYAINFFANIGMGFLTRDLREWLKNNP 568          
BLAST of Gcaud2385.t1 vs. uniprot
Match: A0A7S0SER1_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SER1_9CHLO)

HSP 1 Score: 365 bits (938), Expect = 5.350e-111
Identity = 217/534 (40.64%), Postives = 325/534 (60.86%), Query Frame = 0
Query:   38 YIPPFRARRLAAVSSPQNS---QLQHWTRLKKSIHGTVNRLNASNLPHCVIDLFRLNLVRARGLFCKAILRAQVASPNLSPIFACFVAVVGSRFPVIVNLLLRRLVAQLKTAYRNQDRASCFATARFLANLYNQHVIKDLLVLEFLCLCTVDPSDSSAELTVVTLRECAVTLYQNSPDALEFVFQKLRAMLHDGHLGRRAQVAIENLLILRRNKFRDLPSTDSRLDLLHEKDIFTHDITLEEDLGDLEYECDNFQFDRKYEENEKIYSEIKKQILGAAMDQMPQGLTEDPGRPQSDKSSNPTSQTXXXXXXXXXXXXXXXXXXXXXXXXQ-----NFRRTVYLTHNATLSADESAHRLFLLMRDNKGREAELCRMIVECCGQESSFQKVYGNLAHRICYCDRSYRAHFEELFADHYATIHRFDTRKIRIIAHLFAFMLAEEAISWNILEVVRIVEEETTASSRTFLKYLFQQVRENMGKAKTKERFSRAEKDGNLRGVFPTDCAKNARFSINMFTTIGLGFLTDGLRDKLKDLP 563
            Y+PPF+  ++ A  + +     Q   W  LKKSI+G VN++N SN+ + + +LF  N++R RGLF ++++++Q+ASP+ SPIFA  VAVV ++FP +  L+L+R++ Q + A++  D+  C A  RFLA+L NQ V  +LL LE + +    P+D S E+ +  ++EC  TL++ SP  L  +F++ R +LH+G + +R Q  IE L  +R+  F       S LDL+ E+D   H+++L+++L   E   D F+ D +YEE+EK Y EIKK++LG +                SD+        XXXXXXXXXXXXXXXXXX            N RRT+YLT  + L  +E+ H+L + +    G+E E+C M+ ECC QE +F + YG LA R C+ D+ Y   F+E F   Y+TIHR +T K+R +A  FA +L  +A+SW  +  +++ EE TT+SSR F+K LFQ++ E +G  K  +R   A      +G+ P D  KN RF+IN FT+IGLG LTD LR+ LK++P
Sbjct:  147 YVPPFKLAQMMAEQADKTGPEYQRMTWDALKKSINGLVNKVNGSNIKNILPELFGENMIRGRGLFARSVMKSQMASPHFSPIFAALVAVVNTKFPELGELVLKRVILQFRRAFKRNDKPVCVAATRFLAHLINQQVAHELLALELITVLLASPTDDSVEVAIEFVKECGYTLHELSPQGLHGIFERFRGILHEGEIDKRVQFMIEGLFAVRKAGFEGKQGVPSELDLVDEEDQIVHELSLDDELQ-AEPTLDIFKVDLEYEESEKKYDEIKKEVLGES---------------SSDEEDXXXXXXXXXXXXXXXXXXXXXXXXQAIEDQTETNMVNLRRTIYLTIMSALDFEEAGHKL-MKINIQPGQEVEICTMLTECCSQERTFLRYYGLLAQRFCFIDQQYAQLFDECFMKQYSTIHRLETNKLRNVAKFFAHLLHTDAVSWTCMAYLQLTEEATTSSSRIFIKILFQELSEGLGLRKLNDRMQDANMTEYFQGIMPKDTPKNTRFAINFFTSIGLGGLTDNLREHLKNMP 663          
BLAST of Gcaud2385.t1 vs. uniprot
Match: M2W3K2_GALSU (MI domain-containing protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W3K2_GALSU)

HSP 1 Score: 366 bits (939), Expect = 6.580e-111
Identity = 207/539 (38.40%), Postives = 313/539 (58.07%), Query Frame = 0
Query:   38 YIPPFRARRL---------AAVSSPQNSQLQHWTRLKKSIHGTVNRLNASNLPHCVIDLFRLNLVRARGLFCKAILRAQVASPNLSPIFACFVAVVGSRFPVIVNLLLRRLVAQLKTAYRNQDRASCFATARFLANLYNQHVIKDLLVLEFLCLCTVDPSDSSAELTVVTLRECAVTLYQNSPDALEFVFQKLRAMLHDGHLGRRAQVAIENLLILRRNKFRDLPSTDSRLDLLHEKDIFTHDITLEEDLGDLEYECDNFQFDRKYEENEKIYSEIKKQILGAAMDQMPQGLTEDPGRPQS--DKSSNPTSQTXXXXXXXXXXXXXXXXXXXXXXXXQNFRRTVYLTHNATLSADESAHRLFLLMRD--NKGREAELCRMIVECCGQESSFQKVYGNLAHRICYCDRSYRAHFEELFADHYATIHRFDTRKIRIIAHLFAFMLAEEAISWNILEVVRIVEEETTASSRTFLKYLFQQVRENMGKAKTKERFSRAEKDGNLRGVFPTDCAKNARFSINMFTTIGLGFLTDGLRDKLKDLP 563
            YIPPF+  R+           +S     Q   W  LKK I+G VN++N +N+   + + FRLNL+R RGL  +AIL+AQ+ SP  + ++A  +AV+ ++ P I  ++L R++ Q + A++  D+  C +T +F+A+L NQ V  +LL L+ L L    P+D S E+ V  ++EC   L + SP  L  VF++LR +LH+G + +R Q  IE L  +RR+ F   P     LDL+ E+D  TH+I L+++L +L+   D F FD +Y+ENE  Y+EI+++ILG                  +  +   N T                             FRR+VYLT  ++LS +E AH+L  LM +  N+ R+ ELC MI+ECC QE ++ + YG LA R C   + Y   F+ELF ++YATIHR +T K+R +A  FA +   ++ISW+ +E +R+VEEETT+SSR F+K LFQ++ ENM   + +ER        + +G+FP D  +N RF+IN FT+IGLG LT+ +R+ LK+LP
Sbjct:   77 YIPPFKLERMKEERWAAAGGKLSGDYEGQRIAWELLKKKINGCVNKINTTNISQVIPEFFRLNLIRGRGLLSRAILKAQLTSPEFTNVYAALIAVLNTKIPEIGEMILSRVILQFRKAFKRNDKRLCISTTKFIAHLVNQLVCHELLALQLLTLLLEQPTDDSVEVAVAFVKECGNILSELSPQGLYAVFERLRGILHEGDIDKRVQYMIEALFAIRRDGFSKYPPYPPELDLIEEEDRITHEICLDDEL-ELDTSDDVFHFDPEYDENEMRYAEIREEILGKEXXXXXXXXXXXXXXXXAIVNTEENDTKADEATTVIHQGTDMELI----------QFRRSVYLTIMSSLSFEEGAHKLVKLMNEGNNQQRQYELCSMIIECCSQERTYLRFYGLLARRFCSLSQVYSDKFDELFGEYYATIHRLETSKLRNVAKFFAALFETDSISWSAMEYIRLVEEETTSSSRIFVKILFQELAENMTVERLRERLKDPYLQTHFQGLFPLDNPRNTRFAINYFTSIGLGILTEEMREHLKNLP 604          
BLAST of Gcaud2385.t1 vs. uniprot
Match: A0A7S0GWZ2_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0GWZ2_MICPS)

HSP 1 Score: 364 bits (935), Expect = 1.160e-110
Identity = 208/535 (38.88%), Postives = 326/535 (60.93%), Query Frame = 0
Query:   38 YIPPFRARRLAAVSSPQNS---QLQHWTRLKKSIHGTVNRLNASNLPHCVIDLFRLNLVRARGLFCKAILRAQVASPNLSPIFACFVAVVGSRFPVIVNLLLRRLVAQLKTAYRNQDRASCFATARFLANLYNQHVIKDLLVLEFLCLCTVDPSDSSAELTVVTLRECAVTLYQNSPDALEFVFQKLRAMLHDGHLGRRAQVAIENLLILRRNKFRDLPSTDSRLDLLHEKDIFTHDITLEEDLGDLEYECDNFQFDRKYEENEKIYSEIKKQILGAAMDQMPQGLTEDPGRPQSDKSSNPTSQTXXXXXXXXXXXXXXXXXXXXXXXXQ------NFRRTVYLTHNATLSADESAHRLFLLMRDNKGREAELCRMIVECCGQESSFQKVYGNLAHRICYCDRSYRAHFEELFADHYATIHRFDTRKIRIIAHLFAFMLAEEAISWNILEVVRIVEEETTASSRTFLKYLFQQVRENMGKAKTKERFSRAEKDGNLRGVFPTDCAKNARFSINMFTTIGLGFLTDGLRDKLKDLP 563
            Y+PPF+  ++ A  + +     Q   W  LKKSI+G VN++NASN+ H + +LF  N++R RGLF ++++++Q+ASP+ S +FA  VAVV ++FP +  L+L+R++ Q + A++  D+  C A  +FLA+L NQ V+ +L+ LE L +    P++ S E+ +  ++EC  TL++ +P  L  +F++ R +LH+G + +R Q  IENL  +R+  F       + LDL+ E+D   H+++++++L   E   D F+ D +YEE+E+ Y+EIKK+ILG +                SD         XXXXXXXXXXXX            Q      N RRT+YLT  ++L  +E+ H+L + +    G+E E+C M+ ECC QE ++ + YG LA R C+ D+ Y   F+E+F   Y+TIHR +T K+R +A  FA +L+ +A+SW  +  +++ EE TT+SSR F+K LFQ++ E++G  K  ER   A      +G+ P D  KN RF+IN FT+IGLG LTD LR+ LK++P
Sbjct:  135 YVPPFKLAQMMAEQTDKTGPEYQRMTWDALKKSINGLVNKVNASNIKHILPELFAENMIRGRGLFARSVMKSQMASPHFSSVFAALVAVVNTKFPELGELVLKRIILQFRRAFKRNDKPVCVAATKFLAHLINQQVVHELIALELLTVLLSTPTNDSVEVAIEFVKECGYTLHELTPQGLHGIFERFRGILHEGEIDKRVQFMIENLFAIRKAGFEGKKGVPADLDLVEEEDQIVHELSMDDELQ-AEATLDIFKVDPEYEESERKYAEIKKEILGES---------------SSDXXXXXXXXXXXXXXXXXXXXXVAQQAMRQKIEDQTETNLVNLRRTIYLTIMSSLDFEEAGHKL-MKIHLQPGQEVEICTMLTECCSQERTYLRYYGLLAQRFCFIDKMYAQLFDEVFMKQYSTIHRLETNKLRNVAKFFAHLLSTDAMSWTCMAYLQLTEEATTSSSRIFIKILFQELSESLGLRKLNERLMDASMAEYFQGIMPRDTPKNVRFAINFFTSIGLGGLTDDLREHLKNMP 652          
BLAST of Gcaud2385.t1 vs. uniprot
Match: A0A1R3I0K8_COCAP (MIF4G-like, type 3 n=1 Tax=Corchorus capsularis TaxID=210143 RepID=A0A1R3I0K8_COCAP)

HSP 1 Score: 363 bits (933), Expect = 1.750e-110
Identity = 212/529 (40.08%), Postives = 323/529 (61.06%), Query Frame = 0
Query:   38 YIPPFRARRLAAVSSPQNS---QLQHWTRLKKSIHGTVNRLNASNLPHCVIDLFRLNLVRARGLFCKAILRAQVASPNLSPIFACFVAVVGSRFPVIVNLLLRRLVAQLKTAYRNQDRASCFATARFLANLYNQHVIKDLLVLEFLCLCTVDPSDSSAELTVVTLRECAVTLYQNSPDALEFVFQKLRAMLHDGHLGRRAQVAIENLLILRRNKFRDLPSTDSRLDLLHEKDIFTHDITLEEDLGDLEYECDNFQFDRKYEENEKIYSEIKKQILGAAMDQMPQGLTEDPGRPQSDKSSNPTSQTXXXXXXXXXXXXXXXXXXXXXXXXQNFRRTVYLTHNATLSADESAHRLFLLMRDNKGREAELCRMIVECCGQESSFQKVYGNLAHRICYCDRSYRAHFEELFADHYATIHRFDTRKIRIIAHLFAFMLAEEAISWNILEVVRIVEEETTASSRTFLKYLFQQVRENMGKAKTKERFSRAEKDGNLRGVFPTDCAKNARFSINMFTTIGLGFLTDGLRDKLKDLP 563
            YIPPF+  R+   +  ++S   Q   W  L+KSI+G VN++NA+N+ + +++LF  NL+R  G+FC++ +++Q+ASP  + +FA  VAVV ++FP +  LLLRR+V QLK AY+  D+    A  +F+A+L NQ V+ +++ LE L +   +P++ S E+ V  + EC   L   SP  L  +F++ R +LH+G + +R Q  IE L  +R+ KF+  P+    LDL+ + D  TH+I+LE+++ D E   D F  D  + ENEK Y E+KK ILG          +ED                XXXXXXXXXXXX             N +RT+YLT  + L +D+  H L  +  +  G+E ELCRM+++CC Q+ ++  +YG++A R C  ++ YR +FE+ FA+ Y+TIHR +T KIR +A  FA +L  +A+ W++L  +R+ EE+TT+SSR F+K LFQ++ E +G  +  ER S      +   +FP D  KN RFSIN FTTIGLG +T+ LR+ LK++P
Sbjct:  135 YIPPFKLARMMKETHDKSSVEYQRLTWDALRKSINGLVNKVNATNIKNIILELFAENLIRGMGIFCRSCMKSQMASPGFTDVFAALVAVVNTKFPEVGALLLRRVVLQLKRAYKRNDKPQLSAAVKFIAHLVNQQVVHEIIALELLTVLLENPTEDSVEVAVGFVSECGSLLQDLSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKAKFQGYPAVRPELDLVEQYDQTTHEISLEDEI-DPEIALDIFNADPLFMENEKRYEELKKTILGEE--------SEDXXX----XXXXXXXXXXXXXXXXXXXXXQMRIKDETETNLVNLKRTIYLTMQSNLKSDDVGHMLMKIKLE-PGQEMELCRMLLDCCSQDKTWNSLYGHVAARFCLINKVYRENFEKCFAEQYSTIHRLETNKIRNVAKFFAHLLHTDALPWHVLAHLRLTEEDTTSSSRIFIKILFQELSEQLGIRRLNERLSDPTMQDSFESIFPKDDPKNTRFSINFFTTIGLGGITENLREYLKNMP 649          
BLAST of Gcaud2385.t1 vs. uniprot
Match: C1N199_MICPC (MIF4G and MA3 domain-containing protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1N199_MICPC)

HSP 1 Score: 363 bits (931), Expect = 3.160e-110
Identity = 200/529 (37.81%), Postives = 305/529 (57.66%), Query Frame = 0
Query:   38 YIPPFRARRLAAVSSPQNS---QLQHWTRLKKSIHGTVNRLNASNLPHCVIDLFRLNLVRARGLFCKAILRAQVASPNLSPIFACFVAVVGSRFPVIVNLLLRRLVAQLKTAYRNQDRASCFATARFLANLYNQHVIKDLLVLEFLCLCTVDPSDSSAELTVVTLRECAVTLYQNSPDALEFVFQKLRAMLHDGHLGRRAQVAIENLLILRRNKFRDLPSTDSRLDLLHEKDIFTHDITLEEDLGDLEYECDNFQFDRKYEENEKIYSEIKKQILGAAMDQMPQGLTEDPGRPQSDKSSNPTSQTXXXXXXXXXXXXXXXXXXXXXXXXQNFRRTVYLTHNATLSADESAHRLFLLMRDNKGREAELCRMIVECCGQESSFQKVYGNLAHRICYCDRSYRAHFEELFADHYATIHRFDTRKIRIIAHLFAFMLAEEAISWNILEVVRIVEEETTASSRTFLKYLFQQVRENMGKAKTKERFSRAEKDGNLRGVFPTDCAKNARFSINMFTTIGLGFLTDGLRDKLKDLP 563
            YIPPF+  ++ A  + +     Q   W  LKKSI+G VN++NASN+ + + +LF  N++R RGLF ++++++Q+ASP  SPIFA  VAVV ++FP +  L+L R++ Q + A++  D+  C A  RFLA+L NQ V  +LL LE L +    P+D S E+ +  ++EC  TL + +P  L  +F++ R +LH+G + +R Q  IE L  +R+  F         LDL+ E D   H+++L++DL   E   D F+ D +YEE+E+ Y++IK++ILG +                        +Q                          N RRT+YLT  ++L  +E+ H+L + +    G+E E+C M+ ECC QE +F + YG LA R C+ D+ Y   F+E+F   Y+TIHR +T K+R +A  FA +L+ +AISW  L  +++ EE TT+SSR F+K LFQ++ E+ G  K  ER          +G+ P D  KN RF+IN FT+IGLG LTD LR+ LK++P
Sbjct:  118 YIPPFKLAQMMAEQADKTGPEYQRMTWDALKKSINGLVNKVNASNVKNILPELFAENMIRGRGLFARSVMKSQMASPQFSPIFAALVAVVNTKFPELGELVLTRVILQFRRAFKRNDKPVCVAATRFLAHLINQQVTHELLALELLTVLLASPTDDSVEVAIEFVKECGYTLNELTPQGLHSIFERFRGILHEGEIDKRVQFMIEGLFAVRKAGFEGKQGVPPELDLVEEDDQIVHELSLDDDLK-AEATLDIFKVDPEYEESERKYADIKREILGESSXXXXXXXXXXXXXXXXXXXXXXXAQXQAQQEIQDQTETNLV----------NLRRTIYLTIMSSLDFEEAGHKL-MKINIQPGQEVEICTMLTECCSQERTFLRYYGLLAQRFCFIDQQYAQLFDEVFMKQYSTIHRLETSKLRNVAKFFAHLLSTDAISWTSLAYLQLTEEATTSSSRIFIKILFQELSESFGLRKLNERLQDKNMAEYFQGIMPKDTPKNTRFAINFFTSIGLGGLTDDLREHLKNMP 634          
BLAST of Gcaud2385.t1 vs. uniprot
Match: A0A7R9TBP5_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9TBP5_9VIRI)

HSP 1 Score: 362 bits (928), Expect = 6.840e-110
Identity = 204/540 (37.78%), Postives = 311/540 (57.59%), Query Frame = 0
Query:   38 YIPPFRARRLAAVSSPQN--SQLQHWTRLKKSIHGTVNRLNASNLPHCVIDLFRLNLVRARGLFCKAILRAQVASPNLSPIFACFVAVVGSRFPVIVNLLLRRLVAQLKTAYRNQDRASCFATARFLANLYNQHVIKDLLVLEFLCLCTVDPSDSSAELTVVTLRECAVTLYQNSPDALEFVFQKLRAMLHDGHLGRRAQVAIENLLILRRNKFRDLPSTDSRLDLLHEKDIFTHDITLEEDLGDLEYECDNFQFDRKYEENEKIYSEIKKQILGAAMDQMPQGLTEDPGRPQSDKSSNPTS-----------QTXXXXXXXXXXXXXXXXXXXXXXXXQNFRRTVYLTHNATLSADESAHRLFLLMRDNKGREAELCRMIVECCGQESSFQKVYGNLAHRICYCDRSYRAHFEELFADHYATIHRFDTRKIRIIAHLFAFMLAEEAISWNILEVVRIVEEETTASSRTFLKYLFQQVRENMGKAKTKERF-SRAEKDGNLRGVFPTDCAKNARFSINMFTTIGLGFLTDGLRDKLKDLP 563
            Y+PP +  RLAA        +Q + W  L++S++G VN++NA+N+   + +LF+ N+VR RGL  KA++RAQ+ SP  +P FA  +AV+ ++FP I  LLL R+V Q + AYR  D+ +C A A+F+A+L N HV  ++L L+ L L    P+D S E+ V   +EC   L+  SP  L  +F++LR +LH+G + RR Q  IE L  +R+ +F D P+    LDL+  +D  THD+ L+++L D   E D F  D +YE NE  Y+ I++ +LG+   +  +     PG   +  S+               +                          N RRT+YLT  +++  +E+ H+L + +R   G E ELC M++ECC QE ++ + YG L  R+C  DR YR  F++LFA  Y+ IHR +T K+R +   +A +L   A+ W ++  VR+ E +T++SSR F+K LFQ++ E +G    ++R  S AE  G   G+FP D A N RF+IN +T+IGLG LTD LR+ LK+LP
Sbjct:   64 YMPPHKRARLAAAGDSDGVAAQREAWEALRRSLNGIVNKVNAANIGEVLPELFQYNVVRGRGLLVKALMRAQLGSPGYTPTFAALMAVINTKFPEIGELLLGRVVLQFRRAYRRNDKQACLALAKFVAHLVNHHVAHEILALQLLMLLLEKPTDVSVEIAVAFTKECGACLHSLSPQGLHSIFERLRNVLHEGQIDRRVQFVIEGLFAVRKTRFADFPAVPEELDLVEAEDQITHDVGLDDEL-DAMVELDVFSADPEYEANEAKYAAIRESLLGSEGGEGDEREELPPGDADAGGSAGGVGGGEIVQGRVPEEPGVGAAAGPGAGVGGPVTDMTETNLTNLRRTIYLTIMSSMDFEEAGHKL-MKIRLLPGEEVELCTMLLECCSQERTYLRYYGLLGQRLCEIDRKYRDIFDDLFARQYSMIHRLETNKLRNVGKFYAHLLCTNALPWTVMAYVRLTEADTSSSSRIFIKILFQEIAEQIGLRTFRDRLASNAEHCG---GIFPRDTAPNMRFAINFYTSIGLGGLTDELREHLKNLP 598          
BLAST of Gcaud2385.t1 vs. uniprot
Match: C5XF95_SORBI (MI domain-containing protein n=9 Tax=Panicoideae TaxID=147369 RepID=C5XF95_SORBI)

HSP 1 Score: 363 bits (933), Expect = 1.760e-109
Identity = 217/530 (40.94%), Postives = 324/530 (61.13%), Query Frame = 0
Query:   38 YIPPFRA----RRLAAVSSPQNSQLQHWTRLKKSIHGTVNRLNASNLPHCVIDLFRLNLVRARGLFCKAILRAQVASPNLSPIFACFVAVVGSRFPVIVNLLLRRLVAQLKTAYRNQDRASCFATARFLANLYNQHVIKDLLVLEFLCLCTVDPSDSSAELTVVTLRECAVTLYQNSPDALEFVFQKLRAMLHDGHLGRRAQVAIENLLILRRNKFRDLPSTDSRLDLLHEKDIFTHDITLEEDLGDLEYECDNFQFDRKYEENEKIYSEIKKQILGAAMDQMPQGLTEDPGRPQSDKSSNPTSQTXXXXXXXXXXXXXXXXXXXXXXXXQNFRRTVYLTHNATLSADESAHRLFLLMRDNKGREAELCRMIVECCGQESSFQKVYGNLAHRICYCDRSYRAHFEELFADHYATIHRFDTRKIRIIAHLFAFMLAEEAISWNILEVVRIVEEETTASSRTFLKYLFQQVRENMGKAKTKERFSRAEKDGNLRGVFPTDCAKNARFSINMFTTIGLGFLTDGLRDKLKDLP 563
            YIPPFR     R +   SSP+  +L  W  LKKSI+G VN++NA+N+ + V +LF  NLVR RGLFC++ +++Q+ASP  + +FA  VAVV ++FP I  LLL R+V QLK AY+  D+    A  +F+A+L NQ V  +L+ LE L +   +P+D S E+ V  ++EC   L   SP  L  +F++ R +LH+G + +R Q  IE L  +R+ KF+  P+    LDL+ ++D FTH+I+LE+DL D E   + F+ +  + E+EK Y  +K+ ILGA         +ED      +         XXXXXXXXXXXX             N RRT+YLT  +++  +E+ H+L  +  +  G+E ELC M++ECC QE ++ + YG L  R C  ++ Y+ +FE+ F   Y+ IHR +T K+R +A  FA +L  +A+ W++L  +R+ EE+TT+SSR F+K LFQ++ E++G     ER +     G+   +FP D  KN RFSIN FT+IGLG +T+ LR+ LK++P
Sbjct:  223 YIPPFRMAQMMRDVEDKSSPEYQRLT-WDALKKSINGLVNKVNATNIKNIVPELFAENLVRGRGLFCQSCIKSQMASPGFTDVFAALVAVVNTKFPEIGRLLLVRVVLQLKRAYKRNDKPQLLAATKFIAHLVNQVVAHELVALELLTVLLENPTDDSVEVAVGFVKECGAMLQDLSPQGLHAIFERFRGILHEGEIDKRVQFLIEGLFAIRKAKFQGFPAIRPELDLVEQEDQFTHEISLEDDL-DPETNLNVFRANPNFVEDEKAYENLKRSILGAES-------SED-----EEXXXXXXXXXXXXXXXXXXXXXQMEIRDRTETNLVNLRRTIYLTIMSSVDFEEAGHKLMKIKLE-PGQEMELCIMLLECCSQERTYLRYYGLLGQRFCMINKVYQENFEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLAYIRLTEEDTTSSSRIFIKILFQELSEHLGIRLLNERLNDPNMQGSFESIFPKDHPKNTRFSINFFTSIGLGGITESLREYLKNMP 737          
BLAST of Gcaud2385.t1 vs. uniprot
Match: A0A834T533_9FABA (Pre-mRNA-splicing factor CWC22-like protein n=1 Tax=Senna tora TaxID=362788 RepID=A0A834T533_9FABA)

HSP 1 Score: 361 bits (927), Expect = 1.900e-109
Identity = 212/529 (40.08%), Postives = 325/529 (61.44%), Query Frame = 0
Query:   38 YIPPFR-ARRLAAVSSPQNSQLQH--WTRLKKSIHGTVNRLNASNLPHCVIDLFRLNLVRARGLFCKAILRAQVASPNLSPIFACFVAVVGSRFPVIVNLLLRRLVAQLKTAYRNQDRASCFATARFLANLYNQHVIKDLLVLEFLCLCTVDPSDSSAELTVVTLRECAVTLYQNSPDALEFVFQKLRAMLHDGHLGRRAQVAIENLLILRRNKFRDLPSTDSRLDLLHEKDIFTHDITLEEDLGDLEYECDNFQFDRKYEENEKIYSEIKKQILGAAMDQMPQGLTEDPGRPQSDKSSNPTSQTXXXXXXXXXXXXXXXXXXXXXXXXQNFRRTVYLTHNATLSADESAHRLFLLMRDNKGREAELCRMIVECCGQESSFQKVYGNLAHRICYCDRSYRAHFEELFADHYATIHRFDTRKIRIIAHLFAFMLAEEAISWNILEVVRIVEEETTASSRTFLKYLFQQVRENMGKAKTKERFSRAEKDGNLRGVFPTDCAKNARFSINMFTTIGLGFLTDGLRDKLKDLP 563
            YIPPF+ AR +  V    + + Q   W  L+KSI+G VN++NA+N+ + + +LF  NL+R RGLFC++ +++Q+ASP  + +FA  VAVV ++FP + +LLLRR+V QLK AY+  D+    A  +F+A+L NQ V  +++ LE L +    P+D S E+ V  + EC   L   SP  L  +F++ R +LH+G + +R Q  IE L  +R+ KF+  P+    LDL+ ++D  TH+++L+E++ D E   D F+ D  + ENEK Y E++K ILG   +       E+     SD         XXXXXXXXXXXXX            N RRT+YLT  +++  +E+ H+L L ++   G+E ELC M++ECC QE ++ + YG L  R C  ++ Y+ +F++ F   Y+ IHR +T K+R +A  FA +L  +A+ W++L  +R+ EE+TT+SSR F+K LFQ++ E++G     ER + A    +   +FP D  KN RF+IN FT+IGLG LT+ LR+ LK++P
Sbjct:  142 YIPPFKLARMMKEVQDKSSVEYQRLTWDALRKSINGLVNKVNAANIKNIIPELFSENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELLTVLLEKPTDDSVEVAVGFVTECGSILQDLSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKAKFQGYPAVRPELDLVEQEDQLTHEVSLDEEI-DPEISLDIFKQDPNFLENEKRYEEVRKTILGEESED------EEGSEAGSDXXXXXXXXXXXXXXXXXXXXXXRDETETNLI---NLRRTIYLTIMSSVDFEEAGHKL-LKIKLEPGQEMELCIMLLECCSQERTYLRYYGLLGQRFCMINKVYQENFDKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIKILFQELSEHLGIRLLNERLNDATMQDSFESIFPRDNPKNTRFAINFFTSIGLGGLTENLREYLKNMP 659          
The following BLAST results are available for this feature:
BLAST of Gcaud2385.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J259_9FLOR2.270e-30464.95Pre-mRNA-splicing factor CWC22 n=1 Tax=Gracilariop... [more]
R7Q616_CHOCR2.350e-12943.36MI domain-containing protein n=1 Tax=Chondrus cris... [more]
A0A7S0SER1_9CHLO5.350e-11140.64Hypothetical protein n=1 Tax=Mantoniella antarctic... [more]
M2W3K2_GALSU6.580e-11138.40MI domain-containing protein n=1 Tax=Galdieria sul... [more]
A0A7S0GWZ2_MICPS1.160e-11038.88Hypothetical protein n=1 Tax=Micromonas pusilla Ta... [more]
A0A1R3I0K8_COCAP1.750e-11040.08MIF4G-like, type 3 n=1 Tax=Corchorus capsularis Ta... [more]
C1N199_MICPC3.160e-11037.81MIF4G and MA3 domain-containing protein n=1 Tax=Mi... [more]
A0A7R9TBP5_9VIRI6.840e-11037.78Hypothetical protein n=1 Tax=Prasinoderma colonial... [more]
C5XF95_SORBI1.760e-10940.94MI domain-containing protein n=9 Tax=Panicoideae T... [more]
A0A834T533_9FABA1.900e-10940.08Pre-mRNA-splicing factor CWC22-like protein n=1 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 747..767
NoneNo IPR availableGENE3D1.25.40.180coord: 31..309
e-value: 2.1E-67
score: 229.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 18..38
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 325..358
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 566..638
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..38
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 679..769
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 599..638
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 312..358
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..17
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 666..784
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 578..595
NoneNo IPR availablePANTHERPTHR18034CELL CYCLE CONTROL PROTEIN CWF22-RELATEDcoord: 38..654
NoneNo IPR availablePANTHERPTHR18034:SF3PRE-MRNA-SPLICING FACTOR CWC22 HOMOLOGcoord: 38..654
IPR003891Initiation factor eIF-4 gamma, MA3SMARTSM00544ma3_7coord: 366..473
e-value: 4.9E-5
score: 32.7
IPR003891Initiation factor eIF-4 gamma, MA3PFAMPF02847MA3coord: 397..472
e-value: 4.2E-10
score: 39.6
IPR003891Initiation factor eIF-4 gamma, MA3PROSITEPS51366MIcoord: 365..482
score: 14.107071
IPR003890MIF4G-like, type 3SMARTSM00543if4_15coord: 65..248
e-value: 1.6E-19
score: 80.8
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 55..295

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_830_length_17382_cov_5.634087contigNODE_830_length_17382_cov_5.634087:5424..8076 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2385.t1Gcaud2385.t1Gracilaria caudata M_176_S67 malemRNANODE_830_length_17382_cov_5.634087 5424..8076 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2385.t1 ID=Gcaud2385.t1|Name=Gcaud2385.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=866bp
LTTMATPTQTVRLATPPVPSSSRPPRPPRPPRPQPPPYIPPFRARRLAAV
SSPQNSQLQHWTRLKKSIHGTVNRLNASNLPHCVIDLFRLNLVRARGLFC
KAILRAQVASPNLSPIFACFVAVVGSRFPVIVNLLLRRLVAQLKTAYRNQ
DRASCFATARFLANLYNQHVIKDLLVLEFLCLCTVDPSDSSAELTVVTLR
ECAVTLYQNSPDALEFVFQKLRAMLHDGHLGRRAQVAIENLLILRRNKFR
DLPSTDSRLDLLHEKDIFTHDITLEEDLGDLEYECDNFQFDRKYEENEKI
YSEIKKQILGAAMDQMPQGLTEDPGRPQSDKSSNPTSQTPESNTNNNKDS
TQIKTTDLTNTDLQNFRRTVYLTHNATLSADESAHRLFLLMRDNKGREAE
LCRMIVECCGQESSFQKVYGNLAHRICYCDRSYRAHFEELFADHYATIHR
FDTRKIRIIAHLFAFMLAEEAISWNILEVVRIVEEETTASSRTFLKYLFQ
QVRENMGKAKTKERFSRAEKDGNLRGVFPTDCAKNARFSINMFTTIGLGF
LTDGLRDKLKDLPDQAVDARDEARDTETSTSSSSLSSSSLSPSVGDEHPQ
GDISDDNITRGSKRPQDEVSRQESERPTKVRRLERSASRRGELESRRRRD
IRQNIELDDIERNHRAYVNSSSGSRSRRYAPEQSDEEERDYRSKRRQNQY
SSYRGEGRHRDRYRSSRLASHEYREGHREGHHSDDEALRRPASRDRRGRH
RSDLEEYERDRRDERTEGGALNTTEQYLLNPESADGGIPPRVFVDAASII
QTRNRLLTVRKEEDGAVVLGAVGVRHKGVIRLTILMRLRFLDPQGNDDDT
DSRVMEGIVLFSVVD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003891Initiation_fac_eIF4g_MI
IPR003890MIF4G-like_typ-3
IPR016024ARM-type_fold