Gcaud1950.t1 (polypeptide) Gracilaria caudata M_176_S67 male
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Overview
Homology
BLAST of Gcaud1950.t1 vs. uniprot
Match: A0A2V3IW61_9FLOR (Pre-mRNA-splicing factor SYF2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IW61_9FLOR) HSP 1 Score: 209 bits (531), Expect = 1.260e-63 Identity = 125/203 (61.58%), Postives = 149/203 (73.40%), Query Frame = 0
Query: 1 MASTAERLKELKKKLLEAREENLKAADYEERQREEDTDVAVNRDSFQGPPKNRKGV--RKESFNRRN-----NANERDSGLGSADEAEGENNDERLRSMKRRARAMEKTLHESTSQVQSEDNGVITYGAVTDTKEGIDRMVNEIEGVDRRRAKYRRRRTFDEDRADISFINEGNRIFNRTLDKHFDKFESVQKIKDSLERGTA 196
MAS ERLKEL+K+L EAREENLKA DYEE Q+ ED + PP++ + + R E+ +R + + R +GSADEAE E NDERLR MKRRA+AME + V S D+ V+ YG VTD KEG+DRMV E+E V+RRRAKYRRRRTFDEDR+DISFINEGNR+FNRTLDKHFDKF+SV+KIKDSLERGTA
Sbjct: 1 MASAGERLKELRKQLAEAREENLKAVDYEEHQKVEDISSS--------PPRSEEIILLRGENHEKRRMHDGGDKSNRHIDVGSADEAEEEENDERLRGMKRRAKAMELANQNNPVPVISNDDTVVAYGTVTDQKEGVDRMVGELEKVERRRAKYRRRRTFDEDRSDISFINEGNRLFNRTLDKHFDKFDSVKKIKDSLERGTA 195
BLAST of Gcaud1950.t1 vs. uniprot
Match: R7QLB2_CHOCR (Pre-mRNA-splicing factor SYF2 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLB2_CHOCR) HSP 1 Score: 156 bits (394), Expect = 5.740e-43 Identity = 104/207 (50.24%), Postives = 136/207 (65.70%), Query Frame = 0
Query: 1 MASTAERLKELKKKLLEAREENLKAADYEERQR-------EEDTDVAVNRDSFQGPPKNRKGVRKESFNRRNNANERDSG--LGSADEAEGENNDERLRSMKRRARAMEKTLHESTSQVQSEDNGVITYGAVT-DTK-EGIDRMVNEIEGVDRRRAKYRRRRTFDEDRADISFINEGNRIFNRTLDKHFDKFESVQKIKDSLERGTA 196
M S ERL LK KL +AR ENLKA + E ++R + + A S + PP ++ + RR ER + +GSADEA+GE+ D+ LRSMKRRA+ M++++ S S + + YG D K E IDRMVNE++ VD+RR+K+ RRR FDE+R +I+FINEGNR+FN+TLDKHFDKFESVQKIKDSLERGTA
Sbjct: 1 MVSAQERLAALKTKLEQARNENLKAVEDESKRRPNSYNNRKRSSSDAELSGSEESPPS----LKSSNCKRRRVKRERSTAAEIGSADEADGEDEDDGLRSMKRRAKNMKRSMPLSGSGEEDGKLQTVAYGLTGHDPKAENIDRMVNELQEVDKRRSKFHRRRAFDENRTEITFINEGNRLFNKTLDKHFDKFESVQKIKDSLERGTA 203
BLAST of Gcaud1950.t1 vs. uniprot
Match: A0A0S7L4D7_9TELE (Pre-mRNA-splicing factor SYF2 (Fragment) n=1 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7L4D7_9TELE) HSP 1 Score: 72.8 bits (177), Expect = 3.320e-12 Identity = 43/97 (44.33%), Postives = 61/97 (62.89%), Query Frame = 0
Query: 100 EKTLHESTSQVQSEDNGVITYGAVTDTKEGIDRMVNEIEGVDRRRAKYRRRRTFDEDRADISFINEGNRIFNRTLDKHFDKFESVQKIKDSLERGTA 196
EK ES N ++YG+ TKEGIDRMV ++E +RAKY RRR +++D ADI +INE N FN+ ++ + K+ + +IK +LERGTA
Sbjct: 37 EKQREESGEDFYPTSNS-LSYGSHVPTKEGIDRMVEDVEKQIEKRAKYSRRRAYNDD-ADIDYINERNAKFNKKAERFYGKYTA--EIKQNLERGTA 129
BLAST of Gcaud1950.t1 vs. uniprot
Match: A0A7R9LWZ2_9ACAR (Pre-mRNA-splicing factor SYF2 n=1 Tax=Oppiella nova TaxID=334625 RepID=A0A7R9LWZ2_9ACAR) HSP 1 Score: 72.0 bits (175), Expect = 9.670e-12 Identity = 38/83 (45.78%), Postives = 58/83 (69.88%), Query Frame = 0
Query: 114 DNGVITYGAVTDTKEGIDRMVNEIEGVDRRRAKYRRRRTFDEDRADISFINEGNRIFNRTLDKHFDKFESVQKIKDSLERGTA 196
++ + +G+ D+KE IDRMV+++ +R+KY RRR FD+D ADI +INE N FN+ LD+ + ++ Q+IK +LERGTA
Sbjct: 68 NHNTLIHGSHKDSKEAIDRMVDDLNKQIDKRSKYSRRRRFDDD-ADIDYINERNMKFNKKLDRFYGQY--TQEIKQNLERGTA 147
BLAST of Gcaud1950.t1 vs. uniprot
Match: T1JU20_TETUR (Pre-mRNA-splicing factor SYF2 n=1 Tax=Tetranychus urticae TaxID=32264 RepID=T1JU20_TETUR) HSP 1 Score: 73.9 bits (180), Expect = 1.090e-11 Identity = 40/75 (53.33%), Postives = 54/75 (72.00%), Query Frame = 0
Query: 122 AVTDTKEGIDRMVNEIEGVDRRRAKYRRRRTFDEDRADISFINEGNRIFNRTLDKHFDKFESVQKIKDSLERGTA 196
A DTKEGIDRMV +++ +R KY RRR +D+D ADI FINE NR FN+ LD+ + ++ + +IK +LERGTA
Sbjct: 165 AFKDTKEGIDRMVEDLDKQLEKRGKYSRRRRYDDD-ADIDFINERNRNFNKKLDRFYGQYTT--EIKQNLERGTA 236
BLAST of Gcaud1950.t1 vs. uniprot
Match: A0A2I4BFL6_9TELE (Pre-mRNA-splicing factor SYF2 n=12 Tax=Percomorphaceae TaxID=1489872 RepID=A0A2I4BFL6_9TELE) HSP 1 Score: 73.6 bits (179), Expect = 2.380e-11 Identity = 44/97 (45.36%), Postives = 61/97 (62.89%), Query Frame = 0
Query: 100 EKTLHESTSQVQSEDNGVITYGAVTDTKEGIDRMVNEIEGVDRRRAKYRRRRTFDEDRADISFINEGNRIFNRTLDKHFDKFESVQKIKDSLERGTA 196
EK ES N +I YG T +KEGIDRMV ++E +RAKY RRR +++D ADI +INE N FN+ ++ + K+ + +IK +LERGTA
Sbjct: 178 EKQREESGEDFYPTSNSLI-YGTHTPSKEGIDRMVEDVEKQIEKRAKYSRRRAYNDD-ADIDYINERNAKFNKKAERFYGKYTA--EIKQNLERGTA 270
BLAST of Gcaud1950.t1 vs. uniprot
Match: A0A7R9BIY7_9CRUS (Pre-mRNA-splicing factor SYF2 n=1 Tax=Notodromas monacha TaxID=399045 RepID=A0A7R9BIY7_9CRUS) HSP 1 Score: 73.2 bits (178), Expect = 3.240e-11 Identity = 50/127 (39.37%), Postives = 71/127 (55.91%), Query Frame = 0
Query: 70 RDSGLGSADEAEGENNDERLRSMKRRARAMEKTLHESTSQVQSEDNGVITYGAVTDTKEGIDRMVNEIEGVDRRRAKYRRRRTFDEDRADISFINEGNRIFNRTLDKHFDKFESVQKIKDSLERGTA 196
RD G S ++A +D+ R++K A K E I +G D+KEG+ RMV ++E R+R K+ RRRT+D D ADI FINE N FN+ +D+ + K+ +IK +LERGTA
Sbjct: 148 RDEGFSSFEQATIRQHDKLTRAIKPDMEAY-KYEKEVMGDAFYPSTSTIVHGIREDSKEGVTRMVQDLEKQIRKRGKFSRRRTYDPD-ADIDFINERNMRFNKKIDRFYGKY--TLEIKQNLERGTA 270
BLAST of Gcaud1950.t1 vs. uniprot
Match: A0A3B5PSY7_XIPMA (Pre-mRNA-splicing factor SYF2 n=15 Tax=Cyprinodontoidei TaxID=8087 RepID=A0A3B5PSY7_XIPMA) HSP 1 Score: 72.4 bits (176), Expect = 3.870e-11 Identity = 42/97 (43.30%), Postives = 61/97 (62.89%), Query Frame = 0
Query: 100 EKTLHESTSQVQSEDNGVITYGAVTDTKEGIDRMVNEIEGVDRRRAKYRRRRTFDEDRADISFINEGNRIFNRTLDKHFDKFESVQKIKDSLERGTA 196
EK ES N ++YG+ TKEG+DRMV ++E +RAKY RRR +++D ADI +INE N FN+ ++ + K+ + +IK +LERGTA
Sbjct: 145 EKQREESGEDFYPTSNS-LSYGSHVPTKEGVDRMVEDVEKQIEKRAKYSRRRAYNDD-ADIDYINERNAKFNKKAERFYGKYTA--EIKQNLERGTA 237
BLAST of Gcaud1950.t1 vs. uniprot
Match: A0A3B4F7B5_9CICH (Pre-mRNA-splicing factor SYF2 n=2 Tax=Haplochromini TaxID=319058 RepID=A0A3B4F7B5_9CICH) HSP 1 Score: 71.2 bits (173), Expect = 7.730e-11 Identity = 42/97 (43.30%), Postives = 60/97 (61.86%), Query Frame = 0
Query: 100 EKTLHESTSQVQSEDNGVITYGAVTDTKEGIDRMVNEIEGVDRRRAKYRRRRTFDEDRADISFINEGNRIFNRTLDKHFDKFESVQKIKDSLERGTA 196
EK ES N +I YG TK+GIDRMV ++E +R+KY RRR +++D ADI +INE N FN+ ++ + K+ + +IK +LERGTA
Sbjct: 129 EKQKEESGEDFHPTSNSLI-YGTHVPTKDGIDRMVEDVEKQIEKRSKYSRRRAYNDD-ADIDYINERNAKFNKKAERFYGKYTA--EIKQNLERGTA 221
BLAST of Gcaud1950.t1 vs. uniprot
Match: R7UNX6_CAPTE (Pre-mRNA-splicing factor SYF2 n=1 Tax=Capitella teleta TaxID=283909 RepID=R7UNX6_CAPTE) HSP 1 Score: 71.2 bits (173), Expect = 8.620e-11 Identity = 39/73 (53.42%), Postives = 53/73 (72.60%), Query Frame = 0
Query: 124 TDTKEGIDRMVNEIEGVDRRRAKYRRRRTFDEDRADISFINEGNRIFNRTLDKHFDKFESVQKIKDSLERGTA 196
TDTKE IDRMV+++E +R+KY RRRT DE+ ADI +INE N FN+ L++ + + S +IK +LERGTA
Sbjct: 159 TDTKESIDRMVDDLEQQIEKRSKYSRRRTHDEE-ADIDYINERNMKFNKKLERFYGSYTS--EIKQNLERGTA 228 The following BLAST results are available for this feature:
BLAST of Gcaud1950.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gcaud1950.t1 ID=Gcaud1950.t1|Name=Gcaud1950.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=327bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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