Gcaud1902.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1902.t1
Unique NameGcaud1902.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length131
Homology
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BLAST of Gcaud1902.t1 vs. uniprot
Match: A0A2V3IL16_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IL16_9FLOR)

HSP 1 Score: 84.0 bits (206), Expect = 2.770e-18
Identity = 34/75 (45.33%), Postives = 51/75 (68.00%), Query Frame = 0 
Query:    3 NIGFKTDPRGNKRMILFDFEYTSYSHPFFDLHEICEELEANEVESYLRLWLEYEPMHRLREAYEIGKGVGWILKM 77
            N G K DP   K  + +D+ + + SHPF+D H I E++ A E + YL+ W++YEP+ RLREAY+I   +GW+LK+
Sbjct:   10 NAGLKKDPESRKETMFYDWHFAALSHPFYDFHLIHEDISAAERDRYLQTWIDYEPIDRLREAYDIAHPLGWLLKL 84
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BLAST of Gcaud1902.t1 vs. uniprot
Match: R7Q7G8_CHOCR (APH domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q7G8_CHOCR)

HSP 1 Score: 81.3 bits (199), Expect = 1.560e-15
Identity = 37/78 (47.44%), Postives = 53/78 (67.95%), Query Frame = 0 
Query:    2 RNIGFKTDPRGNKRMILFDFEYTSYSHPFFDLHEICEELEANEVES--YLRLWLEYEPMHRLREAYEIGKGVGWILKM 77
            RN+G K    G++++++FD+++ S SHPFFDL EI EE   +E E   YL +W EYEP+ R  E YEI   +GW+LK+
Sbjct:  263 RNLGLKKGGDGSQQLVVFDWQFASISHPFFDLREIHEEQNLSEEERRCYLEMWREYEPVERCEELYEIAHRLGWLLKL 340
The following BLAST results are available for this feature:
BLAST of Gcaud1902.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IL16_9FLOR2.770e-1845.33Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q7G8_CHOCR1.560e-1547.44APH domain-containing protein n=1 Tax=Chondrus cri... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.1200.10coord: 3..103
e-value: 1.1E-6
score: 30.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_807_length_17687_cov_4.345135contigNODE_807_length_17687_cov_4.345135:15927..16319 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1902.t1Gcaud1902.t1Gracilaria caudata M_176_S67 malemRNANODE_807_length_17687_cov_4.345135 15927..16319 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1902.t1 ID=Gcaud1902.t1|Name=Gcaud1902.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=131bp
MRNIGFKTDPRGNKRMILFDFEYTSYSHPFFDLHEICEELEANEVESYLR
LWLEYEPMHRLREAYEIGKGVGWILKMWKIWGYMQADCFQYVCPWDEFLF
MCHVHLEKGMKSYESTFIMPNTSASVDDHR*
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