Gcaud2016.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2016.t1
Unique NameGcaud2016.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length254
Homology
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BLAST of Gcaud2016.t1 vs. uniprot
Match: A0A2V3IJA0_9FLOR (50S ribosomal protein L2, chloroplastic n=2 Tax=Rhodymeniophycidae TaxID=2045261 RepID=A0A2V3IJA0_9FLOR)

HSP 1 Score: 497 bits (1279), Expect = 1.320e-177
Identity = 244/253 (96.44%), Postives = 249/253 (98.42%), Query Frame = 0 
Query:    1 MGRVIRGQRKGAGGIFKSHTSKRKGAAKLRALDYSERHGYIRGTVKDIIHDPGRGAPLAKVVFRDRVRYRKNAELFIAAEGMYTGQFLYCGRKANLTIGNVMPLSEMPEGTIVCNVEAKMGDRGKLARASGDYVTVIGHLDGNKTRIRLPSGSRKIVPSTCRAMVGIVAGGGRTDKPMLKAGTAYHKYRVKRNSWPKVRGVAMNPVEHPHGGGNHQHVGHPTTVRRDAPAGKKVGLIAARRTGRIRGGKPSKE 253
            MGRVIRGQRKGAGGIFKSHTSKRKGAAKLR LDYSERHGYIRGTV+DIIHDPGRGAPLAKVVFR+RVRY+K+AELFIAAEGMYTGQFLYCGRKANLTIGNVMPLSEMPEGTIVCNVEAKMGDRGKLARASGDYVTVIGHLD NKTRIRLPSGSRK VPSTCRAMVGIVAGGGRTDKP+LKAG AYHKYRVKRNSWPKVRGVAMNPVEHPHGGGNHQHVGHPTTVRRDAPAGKKVGLIAARRTGRIRGGKPSKE
Sbjct:    1 MGRVIRGQRKGAGGIFKSHTSKRKGAAKLRTLDYSERHGYIRGTVRDIIHDPGRGAPLAKVVFRERVRYKKSAELFIAAEGMYTGQFLYCGRKANLTIGNVMPLSEMPEGTIVCNVEAKMGDRGKLARASGDYVTVIGHLDDNKTRIRLPSGSRKTVPSTCRAMVGIVAGGGRTDKPLLKAGAAYHKYRVKRNSWPKVRGVAMNPVEHPHGGGNHQHVGHPTTVRRDAPAGKKVGLIAARRTGRIRGGKPSKE 253
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BLAST of Gcaud2016.t1 vs. uniprot
Match: A0A7S0BCD8_9RHOD (50S ribosomal protein L2, chloroplastic n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BCD8_9RHOD)

HSP 1 Score: 429 bits (1103), Expect = 1.260e-150
Identity = 199/249 (79.92%), Postives = 229/249 (91.97%), Query Frame = 0 
Query:    1 MGRVIRGQRKGAGGIFKSHTSKRKGAAKLRALDYSERHGYIRGTVKDIIHDPGRGAPLAKVVFRDRVRYRKNAELFIAAEGMYTGQFLYCGRKANLTIGNVMPLSEMPEGTIVCNVEAKMGDRGKLARASGDYVTVIGHLDGNKTRIRLPSGSRKIVPSTCRAMVGIVAGGGRTDKPMLKAGTAYHKYRVKRNSWPKVRGVAMNPVEHPHGGGNHQHVGHPTTVRRDAPAGKKVGLIAARRTGRIRGGK 249
            MGRVIRGQRKGAGGIFKSHTSKRKGAA++RALDY+ER+GYIRGTV +IIHDPGRGAPLA+V FRD  +YRK  EL +AAEGMYTGQF+Y G+KA L +GN+ PL  MPEG ++CNVEAK+GDRGKLARASGD+VT++ H+D NKTRIRLPSG+RK+VPS+CRAMVGIVAGG RT+KP+LKAG AYHK+RVKRN WP+VRGVAMNPVEHPHGGGNHQH+GHP+TVRRDAPAG+K GLIAARRTGR+RGGK
Sbjct:    1 MGRVIRGQRKGAGGIFKSHTSKRKGAARMRALDYAERNGYIRGTVMEIIHDPGRGAPLARVDFRDPYKYRKQKELIVAAEGMYTGQFIYAGKKAQLAVGNIAPLKSMPEGAVICNVEAKLGDRGKLARASGDFVTIVNHIDNNKTRIRLPSGARKLVPSSCRAMVGIVAGGSRTEKPLLKAGRAYHKFRVKRNCWPRVRGVAMNPVEHPHGGGNHQHIGHPSTVRRDAPAGQKAGLIAARRTGRLRGGK 249
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BLAST of Gcaud2016.t1 vs. uniprot
Match: A0A5J4YRE9_PORPP (50S ribosomal protein L2, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YRE9_PORPP)

HSP 1 Score: 428 bits (1101), Expect = 2.550e-150
Identity = 201/249 (80.72%), Postives = 226/249 (90.76%), Query Frame = 0 
Query:    1 MGRVIRGQRKGAGGIFKSHTSKRKGAAKLRALDYSERHGYIRGTVKDIIHDPGRGAPLAKVVFRDRVRYRKNAELFIAAEGMYTGQFLYCGRKANLTIGNVMPLSEMPEGTIVCNVEAKMGDRGKLARASGDYVTVIGHLDGNKTRIRLPSGSRKIVPSTCRAMVGIVAGGGRTDKPMLKAGTAYHKYRVKRNSWPKVRGVAMNPVEHPHGGGNHQHVGHPTTVRRDAPAGKKVGLIAARRTGRIRGGK 249
            MGRVIRGQRKGAGGIF SHTSKR+GAA+LR LD++ERHGYI+GTVKDI+HD GRGAPLAKV FRD  ++++N+ELF+AAEGMYTGQ +YCG+KA LT+GNVMPL EMPEG+I CNVE K GDRGKL RASG YVTV+ HLD NKTRIRLPSG+RKIVPSTCR M+GIV+GGGRTDKP+LKAG AYHKYR KRN WP+VRGV MNPVEHPHGGGNHQH+GHP+TVRRDAP G KVGLIAARRTGR+RGGK
Sbjct:    1 MGRVIRGQRKGAGGIFLSHTSKRQGAARLRHLDFAERHGYIKGTVKDIVHDSGRGAPLAKVEFRDPYKFKRNSELFVAAEGMYTGQSIYCGKKATLTVGNVMPLREMPEGSICCNVEGKQGDRGKLGRASGVYVTVVNHLDNNKTRIRLPSGARKIVPSTCRGMIGIVSGGGRTDKPLLKAGRAYHKYRAKRNCWPRVRGVCMNPVEHPHGGGNHQHIGHPSTVRRDAPPGAKVGLIAARRTGRLRGGK 249
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BLAST of Gcaud2016.t1 vs. uniprot
Match: A0A1X6P8N8_PORUM (50S ribosomal protein L2, chloroplastic n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P8N8_PORUM)

HSP 1 Score: 425 bits (1092), Expect = 4.330e-149
Identity = 201/249 (80.72%), Postives = 223/249 (89.56%), Query Frame = 0 
Query:    1 MGRVIRGQRKGAGGIFKSHTSKRKGAAKLRALDYSERHGYIRGTVKDIIHDPGRGAPLAKVVFRDRVRYRKNAELFIAAEGMYTGQFLYCGRKANLTIGNVMPLSEMPEGTIVCNVEAKMGDRGKLARASGDYVTVIGHLDGNKTRIRLPSGSRKIVPSTCRAMVGIVAGGGRTDKPMLKAGTAYHKYRVKRNSWPKVRGVAMNPVEHPHGGGNHQHVGHPTTVRRDAPAGKKVGLIAARRTGRIRGGK 249
            MGRV+RGQRKGAGGIF SHT KRKGAAKLR LDY+ER+GY++GTV+DIIHDPGRGAPLAKV FRD  ++ K +ELFIA EGMYTGQF+YCG+KA LT+GNVMP+  MPEGTI CNVEAK+GDRGKL R SGDYVTV+ H++  KTR+RLPSG RK+VPSTCRAMVGIVAGGGRTDKPMLKAGTAYHKY+ KRN WP+VRGVAMNPVEHPHGGGNHQHVGHPTTVRRDAP G+KVGLI AR TGR RG K
Sbjct:    1 MGRVVRGQRKGAGGIFLSHTHKRKGAAKLRVLDYAERNGYLKGTVRDIIHDPGRGAPLAKVEFRDPYKFGKRSELFIAPEGMYTGQFVYCGKKAALTVGNVMPVGRMPEGTIACNVEAKLGDRGKLGRCSGDYVTVVNHIETGKTRLRLPSGMRKLVPSTCRAMVGIVAGGGRTDKPMLKAGTAYHKYKAKRNCWPRVRGVAMNPVEHPHGGGNHQHVGHPTTVRRDAPPGQKVGLIGARATGRRRGAK 249
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BLAST of Gcaud2016.t1 vs. uniprot
Match: M2XZH5_GALSU (50S ribosomal protein L2, chloroplastic n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XZH5_GALSU)

HSP 1 Score: 418 bits (1075), Expect = 2.320e-146
Identity = 192/249 (77.11%), Postives = 225/249 (90.36%), Query Frame = 0 
Query:    1 MGRVIRGQRKGAGGIFKSHTSKRKGAAKLRALDYSERHGYIRGTVKDIIHDPGRGAPLAKVVFRDRVRYRKNAELFIAAEGMYTGQFLYCGRKANLTIGNVMPLSEMPEGTIVCNVEAKMGDRGKLARASGDYVTVIGHLDGNKTRIRLPSGSRKIVPSTCRAMVGIVAGGGRTDKPMLKAGTAYHKYRVKRNSWPKVRGVAMNPVEHPHGGGNHQHVGHPTTVRRDAPAGKKVGLIAARRTGRIRGGK 249
            MGRVIRGQRKGAG +F++H +KRKGAA+ RALDY+ERHGYIRG V++IIHDPGRGAPLA+V FRD  RY++  E FIAAEG+Y+GQ +YCG+KA LTIGNV+PL  +PEGT+VCNVE K+GDRGKL R SGDYVTVI  L+GNKTRIRLPSG+RKIVPS CRAM+G++AGGGRTDKP+LKAG AYHKY+ K+N WP+VRGVAMNPV+HPHGGGNHQH+GHP+TVRRDAP G+KVGLIAARRTGR+RGGK
Sbjct:    1 MGRVIRGQRKGAGSVFRAHVAKRKGAARFRALDYAERHGYIRGVVREIIHDPGRGAPLARVEFRDPYRYKRRVETFIAAEGLYSGQSVYCGKKAQLTIGNVIPLGSLPEGTVVCNVEGKVGDRGKLGRCSGDYVTVINQLEGNKTRIRLPSGARKIVPSNCRAMIGMIAGGGRTDKPILKAGRAYHKYKAKKNCWPRVRGVAMNPVDHPHGGGNHQHIGHPSTVRRDAPPGQKVGLIAARRTGRLRGGK 249
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BLAST of Gcaud2016.t1 vs. uniprot
Match: K3X5U7_GLOUD (Ribosomal_L2_C domain-containing protein n=4 Tax=Eukaryota TaxID=2759 RepID=K3X5U7_GLOUD)

HSP 1 Score: 404 bits (1039), Expect = 5.500e-141
Identity = 190/248 (76.61%), Postives = 220/248 (88.71%), Query Frame = 0 
Query:    1 MGRVIRGQRKGAGGIFKSHTSKRKGAAKLRALDYSERHGYIRGTVKDIIHDPGRGAPLAKVVFRDRVRYRKNAELFIAAEGMYTGQFLYCGRKANLTIGNVMPLSEMPEGTIVCNVEAKMGDRGKLARASGDYVTVIGH-LDGNKTRIRLPSGSRKIVPSTCRAMVGIVAGGGRTDKPMLKAGTAYHKYRVKRNSWPKVRGVAMNPVEHPHGGGNHQHVGHPTTVRRDAPAGKKVGLIAARRTGRIRG 247
            MGRVIRGQRKGAGGIFKSHT+KR+GAA  R+LDY ERHGYI+G VK+IIHD GRGAPLA+V +RD  RY+ N EL IAAEGMYTGQF+Y G KA +T+GN++PLS +PEGTIVCNVEA++GDRG  ARASGDY  ++ H  D  +T++RLPSGS+K VPS CRAM+G+VAGGGRTDKP+LKAG AYHKYRVKRN WP+VRGVAMNPVEHPHGGGNHQH+GHP+TVRRDAP+GKKVGLIAARRTGR+RG
Sbjct:    1 MGRVIRGQRKGAGGIFKSHTAKRQGAAAFRSLDYVERHGYIKGVVKEIIHDSGRGAPLARVTYRDPYRYKLNHELLIAAEGMYTGQFIYSGAKAAMTVGNILPLSALPEGTIVCNVEARVGDRGSFARASGDYAVIVTHDEDKGRTKLRLPSGSKKTVPSACRAMIGVVAGGGRTDKPILKAGRAYHKYRVKRNEWPRVRGVAMNPVEHPHGGGNHQHIGHPSTVRRDAPSGKKVGLIAARRTGRLRG 248
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BLAST of Gcaud2016.t1 vs. uniprot
Match: A0A0L0G6R3_9EUKA (60S ribosomal protein L8 n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0G6R3_9EUKA)

HSP 1 Score: 399 bits (1024), Expect = 1.020e-138
Identity = 188/248 (75.81%), Postives = 218/248 (87.90%), Query Frame = 0 
Query:    1 MGRVIRGQRKGAGGIFKSHTSKRKGAAKLRALDYSERHGYIRGTVKDIIHDPGRGAPLAKVVFRDRVRYRKNAELFIAAEGMYTGQFLYCGRKANLTIGNVMPLSEMPEGTIVCNVEAKMGDRGKLARASGDYVTVIGH-LDGNKTRIRLPSGSRKIVPSTCRAMVGIVAGGGRTDKPMLKAGTAYHKYRVKRNSWPKVRGVAMNPVEHPHGGGNHQHVGHPTTVRRDAPAGKKVGLIAARRTGRIRG 247
            MGRVIRGQRKGAG +FKSHT  RKG+A +R +DY+ERHGY++G +K+IIHDPGRGAPLAKV FRD  RYR   ELFIA EG++TGQF++CG+KA+L IGNV+P+ +MPEGTI+CNVE K GDRG +ARASG+Y TV+ H  D  KTR+RLPSGS+KIVPS CRA VGIVAGGGR DKPML+AG +YHKY+VKRNSWP+VRGVAMNPVEHPHGGGNHQH+G P+TVRRDAPAG KVGLIAARRTGRIRG
Sbjct:    1 MGRVIRGQRKGAGSVFKSHTKHRKGSAGIRHIDYAERHGYVKGIIKEIIHDPGRGAPLAKVHFRDPYRYRIKKELFIAPEGVHTGQFIFCGKKASLAIGNVLPVGQMPEGTIICNVEEKAGDRGSMARASGNYCTVVSHNKDSGKTRLRLPSGSKKIVPSKCRATVGIVAGGGRIDKPMLRAGASYHKYKVKRNSWPRVRGVAMNPVEHPHGGGNHQHIGFPSTVRRDAPAGAKVGLIAARRTGRIRG 248
[Close]
BLAST of Gcaud2016.t1 vs. uniprot
Match: A0A087UZJ4_STEMI (60S ribosomal protein L8 (Fragment) n=2 Tax=Entelegynae TaxID=74971 RepID=A0A087UZJ4_STEMI)

HSP 1 Score: 398 bits (1022), Expect = 2.290e-138
Identity = 191/252 (75.79%), Postives = 220/252 (87.30%), Query Frame = 0 
Query:    1 MGRVIRGQRKGAGGIFKSHTSKRKGAAKLRALDYSERHGYIRGTVKDIIHDPGRGAPLAKVVFRDRVRYRKNAELFIAAEGMYTGQFLYCGRKANLTIGNVMPLSEMPEGTIVCNVEAKMGDRGKLARASGDYVTVIGHL-DGNKTRIRLPSGSRKIVPSTCRAMVGIVAGGGRTDKPMLKAGTAYHKYRVKRNSWPKVRGVAMNPVEHPHGGGNHQHVGHPTTVRRDAPAGKKVGLIAARRTGRIRGGKPS 251
            MGRVIR QRKGAG +FKSHT  RKGA KLRA+D++ERHGYI+G VK+IIHDPGRGAPLA VVFRD  RY++  ELFIAAEGMYTGQF+YCG+KA L +GNV+P+  MPEGTI+CN+E K GDRG+LAR SG+Y TVI H  D  KTR++LPSG++K++PS+ RAMVGIVAGGGR DKP+LKAG AYHKY+ KRNSWPKVRGVAMNPVEHPHGGGNHQH+G  +TVRRDA AG+KVGLIAARRTGRIRGGK S
Sbjct:    1 MGRVIRSQRKGAGSVFKSHTKHRKGAPKLRAVDFAERHGYIKGIVKEIIHDPGRGAPLAVVVFRDPYRYKQKKELFIAAEGMYTGQFIYCGKKAVLQVGNVLPVGTMPEGTIICNLEEKSGDRGRLARGSGNYATVISHNPDSKKTRVKLPSGAKKVLPSSNRAMVGIVAGGGRIDKPILKAGRAYHKYKAKRNSWPKVRGVAMNPVEHPHGGGNHQHIGKASTVRRDASAGRKVGLIAARRTGRIRGGKTS 252
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BLAST of Gcaud2016.t1 vs. uniprot
Match: A0A0B7N7Z4_9FUNG (Ribosomal_L2_C domain-containing protein n=29 Tax=Mucorales TaxID=4827 RepID=A0A0B7N7Z4_9FUNG)

HSP 1 Score: 399 bits (1025), Expect = 2.320e-138
Identity = 189/253 (74.70%), Postives = 219/253 (86.56%), Query Frame = 0 
Query:    1 MGRVIRGQRKGAGGIFKSHTSKRKGAAKLRALDYSERHGYIRGTVKDIIHDPGRGAPLAKVVFRDRVRYRKNAELFIAAEGMYTGQFLYCGRKANLTIGNVMPLSEMPEGTIVCNVEAKMGDRGKLARASGDYVTVIGHLDGNKTRIRLPSGSRKIVPSTCRAMVGIVAGGGRTDKPMLKAGTAYHKYRVKRNSWPKVRGVAMNPVEHPHGGGNHQHVGHPTTVRRDAPAGKKVGLIAARRTGRIRGGKPSKE 253
            MGRVIR QRKGAG IF+SHT  RKGAAKLR  D++ERHGY+RG VKDI+HDPGRGAPLAKVVFRD  +Y+   E FIA EGMYTGQF+Y G+KA L IGNVMPL+ +PEGT+VCNVE K+GDRG +ARASG+YVT+IGH D  KTRIRLPSGS+KI+PST RA++GIVAGGGR DKP+LKAG A+HKYRVKRNSWPK RGVAMNPV+HPHGGGNHQH+G  +T+ RD+PAG+KVGLIAARRTG +RG K  K+
Sbjct:   35 MGRVIRAQRKGAGSIFRSHTVGRKGAAKLRVFDFAERHGYVRGIVKDIVHDPGRGAPLAKVVFRDPYKYKLRTETFIATEGMYTGQFIYAGKKATLNIGNVMPLASVPEGTVVCNVEEKVGDRGSIARASGNYVTIIGHGDDGKTRIRLPSGSKKIIPSTSRAVIGIVAGGGRIDKPLLKAGRAFHKYRVKRNSWPKTRGVAMNPVDHPHGGGNHQHIGKASTMARDSPAGQKVGLIAARRTGLLRGTKKIKD 287
[Close]
BLAST of Gcaud2016.t1 vs. uniprot
Match: A0A1I8B4J4_MELHA (60S ribosomal protein L8 n=5 Tax=Tylenchoidea TaxID=33284 RepID=A0A1I8B4J4_MELHA)

HSP 1 Score: 397 bits (1020), Expect = 4.970e-138
Identity = 191/253 (75.49%), Postives = 216/253 (85.38%), Query Frame = 0 
Query:    1 MGRVIRGQRKGAGGIFKSHTSKRKGAAKLRALDYSERHGYIRGTVKDIIHDPGRGAPLAKVVFRDRVRYRKNAELFIAAEGMYTGQFLYCGRKANLTIGNVMPLSEMPEGTIVCNVEAKMGDRGKLARASGDYVTVIGHL-DGNKTRIRLPSGSRKIVPSTCRAMVGIVAGGGRTDKPMLKAGTAYHKYRVKRNSWPKVRGVAMNPVEHPHGGGNHQHVGHPTTVRRDAPAGKKVGLIAARRTGRIRGGKPSK 252
            MGR IR QRKG GGIFKSH+  RKG AKLR +DYSERHGYIRG +KDIIHDPGRGAPLA V FRD  +YR   EL IAAEG+YTGQF+YCG+KA + IGNVMP+ E+PEGT VCN+E K GDRG+LAR SG+Y TVI H  D  +TRIRLPSG++K+VPS  RAM+GIVAGGGRTDKP+LKAG +YHKY+ KRNSWPKVRGVAMNPVEHPHGGGNHQH+GHP+TV+R   AG+KVGLIAARRTGRIRGGKP K
Sbjct:    1 MGRRIRAQRKGRGGIFKSHSKHRKGPAKLRPVDYSERHGYIRGIIKDIIHDPGRGAPLAVVHFRDPYKYRIKKELMIAAEGLYTGQFIYCGKKAQVQIGNVMPIGELPEGTTVCNLEEKAGDRGRLARTSGNYATVIAHKPDVKRTRIRLPSGAKKVVPSANRAMIGIVAGGGRTDKPLLKAGRSYHKYKAKRNSWPKVRGVAMNPVEHPHGGGNHQHIGHPSTVKRGTSAGRKVGLIAARRTGRIRGGKPEK 253
The following BLAST results are available for this feature:
BLAST of Gcaud2016.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IJA0_9FLOR1.320e-17796.4450S ribosomal protein L2, chloroplastic n=2 Tax=Rh... [more]
A0A7S0BCD8_9RHOD1.260e-15079.9250S ribosomal protein L2, chloroplastic n=1 Tax=Rh... [more]
A0A5J4YRE9_PORPP2.550e-15080.7250S ribosomal protein L2, chloroplastic n=1 Tax=Po... [more]
A0A1X6P8N8_PORUM4.330e-14980.7250S ribosomal protein L2, chloroplastic n=1 Tax=Po... [more]
M2XZH5_GALSU2.320e-14677.1150S ribosomal protein L2, chloroplastic n=1 Tax=Ga... [more]
K3X5U7_GLOUD5.500e-14176.61Ribosomal_L2_C domain-containing protein n=4 Tax=E... [more]
A0A0L0G6R3_9EUKA1.020e-13875.8160S ribosomal protein L8 n=1 Tax=Sphaeroforma arct... [more]
A0A087UZJ4_STEMI2.290e-13875.7960S ribosomal protein L8 (Fragment) n=2 Tax=Entele... [more]
A0A0B7N7Z4_9FUNG2.320e-13874.70Ribosomal_L2_C domain-containing protein n=29 Tax=... [more]
A0A1I8B4J4_MELHA4.970e-13875.4960S ribosomal protein L8 n=5 Tax=Tylenchoidea TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022669Ribosomal protein L2, C-terminalSMARTSM01382Ribosomal_L2_C_2coord: 96..230
e-value: 8.6E-68
score: 241.2
IPR022669Ribosomal protein L2, C-terminalPFAMPF03947Ribosomal_L2_Ccoord: 98..223
e-value: 6.3E-47
score: 158.9
IPR002171Ribosomal protein L2SMARTSM01383Ribosomal_L2_2coord: 11..90
e-value: 5.9E-29
score: 112.2
IPR002171Ribosomal protein L2PIRSFPIRSF002158RPL2p_RPL2a_RPL8e_RPL2ocoord: 1..252
e-value: 4.9E-70
score: 233.8
IPR002171Ribosomal protein L2PANTHERPTHR13691RIBOSOMAL PROTEIN L2coord: 1..252
IPR014722Ribosomal protein L2, domain 2GENE3D2.30.30.30coord: 90..168
e-value: 2.4E-26
score: 93.4
NoneNo IPR availableGENE3D2.40.50.140coord: 1..86
e-value: 2.8E-37
score: 128.7
NoneNo IPR availablePANTHERPTHR13691:SF1660S RIBOSOMAL PROTEIN L8coord: 1..252
IPR022666Ribosomal Proteins L2, RNA binding domainPFAMPF00181Ribosomal_L2coord: 15..89
e-value: 6.7E-16
score: 58.0
IPR014726Ribosomal protein L2, domain 3GENE3D4.10.950.10Ribosomal protein L2, domain 3coord: 169..246
e-value: 8.9E-41
score: 140.2
IPR022671Ribosomal protein L2, conserved sitePROSITEPS00467RIBOSOMAL_L2coord: 196..207
IPR023672Ribosomal protein L2, archaeal-typeHAMAPMF_01320_ARibosomal_L2_Acoord: 1..245
score: 35.652489
IPR008991Translation protein SH3-like domain superfamilySUPERFAMILY50104Translation proteins SH3-like domaincoord: 99..245
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 2..97

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_801_length_17760_cov_4.605977contigNODE_801_length_17760_cov_4.605977:13416..14177 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2016.t1Gcaud2016.t1Gracilaria caudata M_176_S67 malemRNANODE_801_length_17760_cov_4.605977 13416..14177 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2016.t1 ID=Gcaud2016.t1|Name=Gcaud2016.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=254bp
MGRVIRGQRKGAGGIFKSHTSKRKGAAKLRALDYSERHGYIRGTVKDIIH
DPGRGAPLAKVVFRDRVRYRKNAELFIAAEGMYTGQFLYCGRKANLTIGN
VMPLSEMPEGTIVCNVEAKMGDRGKLARASGDYVTVIGHLDGNKTRIRLP
SGSRKIVPSTCRAMVGIVAGGGRTDKPMLKAGTAYHKYRVKRNSWPKVRG
VAMNPVEHPHGGGNHQHVGHPTTVRRDAPAGKKVGLIAARRTGRIRGGKP
SKE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022669Ribosomal_L2_C
IPR002171Ribosomal_L2
IPR014722Rib_L2_dom2
IPR022666Rbsml_prot_L2_RNA-bd_dom
IPR014726Ribosomal_L2_dom3
IPR022671Ribosomal_L2_CS
IPR023672Ribosomal_L2_arc
IPR008991Translation_prot_SH3-like_sf
IPR012340NA-bd_OB-fold