Gcaud2092.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2092.t1
Unique NameGcaud2092.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length480
Homology
BLAST of Gcaud2092.t1 vs. uniprot
Match: A0A2V3J167_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J167_9FLOR)

HSP 1 Score: 636 bits (1640), Expect = 4.330e-225
Identity = 308/480 (64.17%), Postives = 397/480 (82.71%), Query Frame = 0
Query:    1 MEQALDPKIFQIGYAGKDAVKECFENRDFEIERIAEFIMEFRNLRGVQVGST--PLTLLKKGGFPPSRALSEVLKIVIDRMKRDVSTLSHDKLDCLLEKSFTYLTVPHLAEIPIATLERINVVDPNIWKQIVDNGLNDSPYTDLPLSIKKRIWSFEPKALDHEIDVLIDGLPEKGNPENLDDLGSNRDRHRMRSTNAKLNELLRMLEGMGENEVMQVLEKMVERAAVEQVPPKLDAIANFYHDLVLRLPTAAVSGPNLMTIRKMAKFLDTKAGHDITLDTHLLKEIREAMSTEHPTGAVALLLGSTYSRDFLADQLVYGLISRRGPINDFADENILKSAATHLRADPHVEDLTFLNICNMKTGPLLSGSGSITEAEIEEPFQLFFQLMMDEIHVEITHMHEHFFSGNLGLPNALLVEAVQKGRLQRRVLTSYCFQQSAYGNFTGLSRYRLLLEDVLRAADNTAEPREVTLAYQLILKIIG 478
            MEQ+LDP+++QIGYAG+DA+KE FENRD+++ER+ +FI++FR LR +Q  S   PL LLK GGF  SR L +VLK++ID++KRD++TLSH+KL+ LLEKSFTYLTVP LA IPIA LE +NVVDP+IWKQIVDNGL+++PY DLPLSIKKRIWSFEPKALDHEI+ L+D LPE    E++++    +DRH++RS N  L +LLRMLEGMGENEV+QV+EKM+ERA+VEQ   K  +IANFYHDL+LRLP+  VSGPN++++RKMA+FL +   +++ +D+HLLK IRE++  E P+ +VALLLGSTY+RDFLA+QLV+ LI RRGPIND+ D  IL+SA +HL+ADPH+EDLT+LN+CNMK+  ++SGS  + EAE++EPFQLFFQLMMDEIH +I   H+ ++S N+GLPN  LV+AVQKG+LQRRV++SYC QQ  + N   LSRYRL+LEDVLRAAD T E REV LA+QLIL+II 
Sbjct:    1 MEQSLDPELYQIGYAGQDAIKESFENRDYDLERVKQFIIDFRTLRRLQFDSVRAPLELLKMGGFSESRVLRDVLKVMIDKVKRDINTLSHEKLESLLEKSFTYLTVPQLAPIPIAVLEHMNVVDPSIWKQIVDNGLSEAPYIDLPLSIKKRIWSFEPKALDHEIEALLDRLPEAPPSESIEEFVVKQDRHKLRSANQMLGDLLRMLEGMGENEVLQVIEKMIERASVEQTASKHISIANFYHDLLLRLPSVVVSGPNMISLRKMARFLASVPSYELDIDSHLLKSIRESLLRETPSSSVALLLGSTYTRDFLAEQLVFSLIHRRGPINDWNDTTILESATSHLKADPHIEDLTYLNLCNMKSAGIVSGSDRVAEAEVDEPFQLFFQLMMDEIHADIVAHHDSYYSANVGLPNVQLVDAVQKGKLQRRVMSSYCLQQFIHRNMVSLSRYRLILEDVLRAADQTTELREVALAHQLILRIIN 480          
BLAST of Gcaud2092.t1 vs. uniprot
Match: R7QN54_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QN54_CHOCR)

HSP 1 Score: 365 bits (937), Expect = 1.500e-118
Identity = 204/481 (42.41%), Postives = 290/481 (60.29%), Query Frame = 0
Query:    1 MEQALDPKIFQIGYAGKDAVKECFENRDFEIERIAEFIMEFRNLRGV--QVGSTPLTLLKKGGFPPSRALSEVLKIVIDRMKRDVSTLSHDKLDCLLEKSFTYLTVPHLAEIPIATLERINVVDPNIWKQIVDNGLNDSPYTDLPLSIKKRIWSFEPKALDHEIDVLIDGLPEKGNPENLDDLGSNRDRHRMRSTNAKLNELLRMLEGMGENE--VMQVLEKMVERAAVEQVPPKLDAIANFYHDLVLRLPTAAVSGPNLMTIRKMAKFLDTKAGHDITLDTHLLKEIREAMSTEHPTGAVALLLGSTYSRDFLADQLVYGLISRRGPINDFADENILKSAATHLRADPHVEDLTFLNICNMKTGPLLSGSGSITEAEIEEPFQLFFQLMMDEIHVEITHMHEHFFSGNLGLPNALLVEAVQKGRLQRRVLTSYCFQQSAYGNFTGLSRYRLLLEDVLRAADNTAEPREVTLAYQLILKII 477
            M   LDP    IGYAGKD +K  FE    +   + +F+ +FR +  +  +  S  L LLK GG   +R  +EV   ++D MKR ++TL  + L  LL+KS+++LTVP L+ I I+ LER++ VD  IW QIV NGL++SPYTDLP SIKKRIW  E  A DHEID ++D + E   P  ++      DR + RS +  L +L+R+   +   E  V ++++K V++A   Q   K  AIAN YHD +  +       P+L ++RKMAKFLDT  G D  +D+ +L  IR+ +  E     V LL+ S+YSRDFLA QLV  L++RRG + +  D+ IL  AA HLRADP + DLTFL +CNMK   L+S   + TE E   PFQ+FF L++ E+ ++     + F++ N  LP+   ++ VQ G+L+RRV+TSYC Q   +GNF GLSR+RL+L+      D   E RE  +A  L+ + I
Sbjct:    1 MNHCLDPGQKLIGYAGKDELKAAFEEVLPDKVGVKKFVKDFREVHSLNGRTISPVLPLLKLGGISSNRMANEVKNALVDIMKRQIATLEQEALQALLDKSYSFLTVPELSPIGISVLERLHYVDRRIWAQIVQNGLDESPYTDLPTSIKKRIWPHEVSAFDHEIDKVLDCITELTTPPGIEAFFVTPDRKKARSEDPILTDLMRLSNAVASEEGMVARIVDKFVQKATAAQTGSKRIAIANVYHDFLTTVNPRV--NPSLTSLRKMAKFLDTPNGED-DIDSDVLGFIRKNIGVEASCATVGLLVASSYSRDFLAFQLVLRLLNRRGSLGEGRDQTILDCAAEHLRADPWIPDLTFLTLCNMKAAALISEHKAPTETEANMPFQMFFPLLIHEMELDDQRFSDQFYAMNAALPDPKFLQIVQAGKLERRVVTSYCLQLFGHGNFVGLSRFRLILDVAFHQMDREEEVRETMIAVNLLQRTI 478          
The following BLAST results are available for this feature:
BLAST of Gcaud2092.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J167_9FLOR4.330e-22564.17Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QN54_CHOCR1.500e-11842.41Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_781_length_18128_cov_4.694018contigNODE_781_length_18128_cov_4.694018:4371..5810 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2092.t1Gcaud2092.t1Gracilaria caudata M_176_S67 malemRNANODE_781_length_18128_cov_4.694018 4371..5810 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2092.t1 ID=Gcaud2092.t1|Name=Gcaud2092.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=480bp
MEQALDPKIFQIGYAGKDAVKECFENRDFEIERIAEFIMEFRNLRGVQVG
STPLTLLKKGGFPPSRALSEVLKIVIDRMKRDVSTLSHDKLDCLLEKSFT
YLTVPHLAEIPIATLERINVVDPNIWKQIVDNGLNDSPYTDLPLSIKKRI
WSFEPKALDHEIDVLIDGLPEKGNPENLDDLGSNRDRHRMRSTNAKLNEL
LRMLEGMGENEVMQVLEKMVERAAVEQVPPKLDAIANFYHDLVLRLPTAA
VSGPNLMTIRKMAKFLDTKAGHDITLDTHLLKEIREAMSTEHPTGAVALL
LGSTYSRDFLADQLVYGLISRRGPINDFADENILKSAATHLRADPHVEDL
TFLNICNMKTGPLLSGSGSITEAEIEEPFQLFFQLMMDEIHVEITHMHEH
FFSGNLGLPNALLVEAVQKGRLQRRVLTSYCFQQSAYGNFTGLSRYRLLL
EDVLRAADNTAEPREVTLAYQLILKIIGP*
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