Gcaud2125.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2125.t1
Unique NameGcaud2125.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length1197
Homology
BLAST of Gcaud2125.t1 vs. uniprot
Match: A0A2V3IGA1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGA1_9FLOR)

HSP 1 Score: 804 bits (2077), Expect = 7.170e-270
Identity = 497/1218 (40.80%), Postives = 714/1218 (58.62%), Query Frame = 0
Query:    1 MSPAPRQLSRKLPLSPQQLSAFDKARKAQTVPEKKKAVDAIVSASFSDGVSIKTGAAKYVLNRLLNGVSVSRNQTRINLSIALIAFIRTLQSAEPKATEQMMISSILTLYGNNGSFEADYTGGERERAIGTVTACAALVRAYDGKLQPATCKEIISLLRPCTTGKCAKWRLGSSSVQIVNEFLRASDAKAVQNVCGKNLWRWCKDIKHTDDGLCLVLTLLQLNIASQSAVEQIYPDLDSVAKALSSTFKTGFSSCSGYGEG-ADVVPLPWKLALNYAFSADGQKHLGGVEKFWRRVVGQGLIHFGKSMEKKALALGLVHLAVPYIGDESSFAMVFDSSLSHLLGNHSLRRSPPTN---VEVTKDINSAA--TLRHVHHSVSLLGEAVINKAIDASSKETPSSLLQWFVLWAVRNQNMAHVMSLTKLDSMLGRVEAEEIRSLFCVMVNEFAFPKNQTSQSGVRATRIQTFEFVLKLANRLPSLLNDIVRIFFFYAVVDDSCYQSPMVSKEEQLKLDSYKAPSNVSLVCNSFPALSAPLSLETAHAVFAKLIRFISKGHNKGHQATWISFGYNHLKLILSWKWIKPRTQHDLEDEDQGEGKASETQNILERLVEPVLLNLSEAHRNVQ--KGFVDAIQLLSKFAGLALLTPFRDSNKQVIDRLRMFCVFATRELFQISSLLKKDDMGVASNRGVENGETERQ---PDAIERLTKLLCEICKRSGAIPHHMTLTVIAEMGSSLDDRVVAVLFDAMEEVLQTDRNQADAQEHDDSDESEEE-----------GEDPTTFEENDSD--EFNSDMQVDEGGREGTQRDVPFLDQNQESADDNLVEAASGEEGSSDSDIXXXVDDEDPAVLEELDKRLVTHMKLVLQEKNASIRGKREPEAKFQITRRILNVIEEVAKNLRLRLSTNKDDGRTGIVFLDLQCRLYEFAMSETRPEGQFLKNVCGIISKHMLLPLSLLQEKVADKETACHIADRFLSSLSTCDILKPLSDLEIQTISKSAACIVGVAALSSDNDYEQFMARYQNLMKVMLTTNS-IMKPKMFSSFLNKAPSLSLSLFPTVCESLETAQRTRNQIGMASIIILQLAELTEEQNSIPIGKRKAFWVSFSQFLQRECEAEFKGWALGGIENIIRVVHFGCTRHFMVVSDSHKETLLAVVKAKVPQKRQHRFRKLLDSASTKVKLIEVTEKDSLCNDDEDQAKKVVSKKR 1193
            MSPAP Q+ RKLPLS Q LSA D+AR A+T  EK+ AV+ I+SA+F DGVS+   + +YV+ RLLNG+SVS  +TRIN S+ L+AFIR L+ A P +T+Q ++S I  +YG +GSFE DY GGERERA+GTVTACAALVRAYDGKLQ + CK+ I LLR C     AKW LG+++V+++ E LR ++ K +Q+ C KNLW+WC++ K  DDGLCLVLTL+ L IA+ +A+ +IYPDLDS+AK L S F TG+S  +G  E  A +VPL W+LA+ YAFS   ++HLGG   FW+ VV + L+H G S EKK LAL L+HLAV  I DE++   +F+SSL+ L+    +  S P N     +    N  A      +  S+S LGE        +  +    + ++  VLW VRN  ++  +   KLD+ L  +E +E+  +F  +VNEFA P+ ++S+  V++ R Q    + K A+    L  D+VRI   YA+ +DS +QS   +K + +  D Y+  S  SL+    P  + PLS E A  VF +L+ F+ +  +   Q +  SF Y  L  ILS +     T   L    + +G       ++   VEP+  NL++  R V+      DAIQL+++F  L++  P   + +        FC+   + L +I   +K D+    +    ++G+ E +   P+++ER+T +LCE+     A PH + L  +  M SSLDDRVVAVLFDA+E  L      ++  E  DS +                ED     EN S   +F+SD Q+DE         +  L   Q++A +           SS S++   VD+EDPAVL+ LD RL  HMKL+++EK ++ + KR  E ++    R+L ++EEVAK LRLRLS++K DGRTG+VFLDL CRLYEFA+      G+FL  VC IISK M+LPL ++   VAD +TA  IADRFL+SL  C   KPL+ LE+Q  S+SA CIVG AA      YE F   Y+ L++VML  +S I +P + SS+ NKAP LSLS+FP V  +L+ ++ +R Q   AS I+L+L +  ++ +     + KAFW S + +L+ +C   F+GW   GIENII+ V  G     +   D+    L+   + KV +K + R  KLL +A       E ++  +  ND+++ +K+   KKR
Sbjct:    1 MSPAPSQIRRKLPLSRQGLSALDRARLAKTSAEKRHAVNDILSAAFVDGVSLDKESVRYVMQRLLNGISVSVTETRINFSVVLVAFIRALEDANPNSTQQKVMSFISQIYGADGSFEIDYAGGERERALGTVTACAALVRAYDGKLQHSCCKQTILLLRHCCVASAAKWSLGNAAVRVITEVLRTANTKELQDSCAKNLWQWCEERKDYDDGLCLVLTLMDLKIAAPNAIRRIYPDLDSLAKPLMSIFGTGYSIFAGDAEDEAGLVPLSWQLAITYAFSDSSREHLGGPGTFWKHVVIEKLVHSGGSAEKKLLALELLHLAVSMIPDETAHNSIFESSLASLI----VVLSSPGNRGGENIVFKANRVAPEVQARLKRSLSRLGETFTTGFFQSPLRRESDTFVEHLVLWLVRNGVVSQTLPPPKLDNFLNALEKKEVAKVFSALVNEFASPRQESSRLSVQSMRTQMLRLIFKFASTFTFLSKDMVRIMLTYAICEDSYHQSLTSAKRKPMPFDVYEPLSEQSLMYGVVPIPTPPLSNEVARNVFGRLVTFMCEHQSPEQQHSLSSFCYESLSFILSLE-ASDGTHCVLRARSKQDGVDG--LELIRTYVEPIFKNLAKG-RGVRFDASLSDAIQLVAEFIALSMFNPVISTKEGEDGEDDDFCLSVAQRLLEIVLEVKMDE-DQTNRENDDHGDKEERGEAPNSVERMTDILCELSGEPEAFPHQVALRAVEAMSSSLDDRVVAVLFDAIESFLLAGGTSSEKDEDVDSLQEAXXXXXXXXXXXXXSEDARIAPENRSQRKQFDSDKQLDER--------LQALSDFQDNASE-----------SSASEVDMDVDEEDPAVLDALDNRLAVHMKLLMEEKKSTTKSKRAREFRYTQVGRVLKLVEEVAKVLRLRLSSDKADGRTGLVFLDLHCRLYEFALGNLGSNGRFLGQVCSIISKQMILPLPVILNNVADAQTAKEIADRFLTSLLNCKSEKPLTTLEVQAASRSAGCIVGTAAALLKKQYEPFSNHYKELVEVMLKKSSHISRPGILSSYFNKAPLLSLSVFPVVERTLKDSEASRTQRTNASAILLELTKAIKQASCQKAREVKAFWNSTNDYLRHQCSVGFEGWNDSGIENIIQTVLLGMNLKCIEDMDAILPALVKANETKVRKKDRQRLSKLLRAAKNSQNPNENSDNTASHNDEKENSKEKSGKKR 1190          
BLAST of Gcaud2125.t1 vs. uniprot
Match: R7QC70_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QC70_CHOCR)

HSP 1 Score: 268 bits (684), Expect = 4.520e-71
Identity = 246/930 (26.45%), Postives = 428/930 (46.02%), Query Frame = 0
Query:  247 TFKTGFSSC--SGYGEGADVVPLPWKLALNYAFSADGQKHLGGVEKFWRRVVGQGLIHFGKSMEKKALALGLVHLAVPYIGDESSFAMVFDSSLSHL----LGNHSLRRSPPTNVEVTKDINSAATLRHVHHSVSLLGEAVINKAIDASSKETPSS-LLQWFVLWAVRNQNMAHVMSLTKLDSMLGRVEAEEIRSLFCVMVNEFAFP-KNQTSQSGVRA-----TRIQTFEFVLKLANRLPSLLNDIVRIFFFYAVVDDSCYQSPMVSKEEQLKLDSYKAPSNVSLVCNSFPALSAPLSLETAHAVFAKLIRFISKGHNKGHQATWISFGYNHLKLILSWKWIK---PRTQHDLEDEDQGEGKASETQNILERLVE--PVLLNLSEAHRNVQKGFVDAIQLLSKFAGLALLTPF-----------RDSNKQVIDRLRMFCVFATRELFQISSLLKKDDMGVASNRGVENGETERQPDAIERLTKLLCEICKRSGAIPHHMTLTVIAEMGSSLDDRVVAVLFDAMEEVLQTDRNQA----DAQEHDDSDESEEEGEDPTTFEENDSDEFNSDMQVDEGGREGTQRDVPFLDQNQESADDNLVEAASGEEGSSDSDIXXXVDD---------------EDPAVLEELDKRLVTHMKLVLQEKNASIRGKREPEAKFQITRRILNVIEEVAKNLRLRLS-TNKDDGRTGIVFLDLQCRLYEFAMSETRPEGQFLKNVCGIISKHMLLPLSLLQEKVADKETACHIADRFLSSLSTCDILKPLSDLEIQTISKSAACIVGVAALSSDNDYEQFMARYQNLMKVMLTTNS-IMKPKMFSSFLNKAPSLSLSLFPTVCESLET--AQRTRNQIGMASIIILQLAELTEEQNSIPIGKRKAFWVSFSQFLQRECEAEF-----KGWALGGIENIIRV 1119
            TF+ GFSS   S  G+   V+P  W+ A+ Y  +++G +HLG +  FW+ VV   L+   +S EKK LAL L+ L    + D  SF +VF+SSL+ +    LG+  +     T   + K   S   L ++ +S   LG+ ++    ++   +     +L  F+ W+V       ++    L  +L  +   + ++LF  +V EFA P ++Q S  G  +      R     F+  LA +  SL  D+VR+   Y+V      +      +  ++LD+++            P L   L L+TA   F +L  F++           + F    L    S + +     RT     +E++GE K+ E Q+   ++VE   +L + SE+      G   +++L++ +  + L  P            +DS +++    +     A       + + +++D   + + G E+GE    P   E + +L+ ++C R G    H+++  I  +   LDD VV+V FDA++  L     +      A++ + S     +GED    E N  DE                +     DQ  ++ +    +A++          XXX                  EDPAVL + DKR+  H++L+ +EK  + + + + E++F     +L+ +E +A+ LR+RL  T +  GR  IVFLDL  RLYEF + + +   +FLK VC ++SK ML+   +L   V+DK+T   I DRF   L +C   + +  LE +TIS+SA  ++ VA+  SD  Y  ++  Y+ ++  M+   S    P +  SF+ KAP LSL L   V ++L++  A ++  Q     ++ L ++ L  + +S  + K   FW      L ++C  +      K W+  G  N+I+V
Sbjct:    3 TFEGGFSSLGSSANGDNKYVIPSVWRSAVRYIITSEGSEHLGSISHFWKSVVLGKLVRGSRSGEKKLLALELIPLVFAEVHDLESFNIVFESSLASMVAAILGSQKMGM---TRAPLRKGRTSEEALAYLTNSAKSLGKRLVKAIFESEGTDRNGQPMLCEFLKWSVTGGIWNMLLPPALLAEVLASLSPADEKTLFSNIVREFAQPYRSQKSLDGGESKSRIHNRASLLRFLFTLARQRHSLAKDVVRVVALYSVFHAEQNRPVGPDLQPLMRLDNFQNRDLCVGYGTVLPQLLPDLPLDTAALAFRRLTDFLASQQRGDRTEDLLLFTVKLLSSASSSQGLSLNLRRTFGSAREEEEGETKSLEVQSTAVKVVERLSILSSTSES-----SGLSKSLKLIAAYLCIGLYDPLCREGKRSVTGIQDSTQELSGLFKTIDNLADHLTETAAEVPREND---SPSDGREDGENSL-PTPTEYIAQLIADLCGRDGNRFRHVSVMAIEALDQKLDDSVVSVFFDAIDSYLSGKVVRVALHRPARDPESSVLDINKGEDEEMEERNSEDE----------------KVRSEYDQGMDNVEPGTSQASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREDPAVLADFDKRIGAHLRLLKEEKKEANQRRLQRESRFXXXXXVLDALEAIARKLRIRLEKTQEACGRLPIVFLDLHVRLYEFVLGDDK-NFRFLKQVCRVVSKQMLIAAPVLVSHVSDKQTVLDIVDRFFKILRSCPTDRQIPALEARTISRSAGSLMNVASELSDGSYTSYLTAYEEILVSMMKPGSHFWIPDILGSFIQKAPLLSLKLSTIVAKTLQSRDAPKSTRQTASEVLLGLSVSALQLDDSSPEVDK---FWKMVEACLLQQCTQQCTRHIGKQWSSEGYCNMIKV 900          
The following BLAST results are available for this feature:
BLAST of Gcaud2125.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IGA1_9FLOR7.170e-27040.80Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QC70_CHOCR4.520e-7126.45Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007015DNA polymerase V/Myb-binding protein 1APFAMPF04931DNA_pol_phicoord: 59..848
e-value: 2.0E-27
score: 95.7
IPR007015DNA polymerase V/Myb-binding protein 1APANTHERPTHR13213MYB-BINDING PROTEIN 1A FAMILY MEMBERcoord: 10..1112
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 746..830
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 757..784

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_778_length_18212_cov_4.691463contigNODE_778_length_18212_cov_4.691463:6235..9825 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2125.t1Gcaud2125.t1Gracilaria caudata M_176_S67 malemRNANODE_778_length_18212_cov_4.691463 6235..9825 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2125.t1 ID=Gcaud2125.t1|Name=Gcaud2125.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=1197bp
MSPAPRQLSRKLPLSPQQLSAFDKARKAQTVPEKKKAVDAIVSASFSDGV
SIKTGAAKYVLNRLLNGVSVSRNQTRINLSIALIAFIRTLQSAEPKATEQ
MMISSILTLYGNNGSFEADYTGGERERAIGTVTACAALVRAYDGKLQPAT
CKEIISLLRPCTTGKCAKWRLGSSSVQIVNEFLRASDAKAVQNVCGKNLW
RWCKDIKHTDDGLCLVLTLLQLNIASQSAVEQIYPDLDSVAKALSSTFKT
GFSSCSGYGEGADVVPLPWKLALNYAFSADGQKHLGGVEKFWRRVVGQGL
IHFGKSMEKKALALGLVHLAVPYIGDESSFAMVFDSSLSHLLGNHSLRRS
PPTNVEVTKDINSAATLRHVHHSVSLLGEAVINKAIDASSKETPSSLLQW
FVLWAVRNQNMAHVMSLTKLDSMLGRVEAEEIRSLFCVMVNEFAFPKNQT
SQSGVRATRIQTFEFVLKLANRLPSLLNDIVRIFFFYAVVDDSCYQSPMV
SKEEQLKLDSYKAPSNVSLVCNSFPALSAPLSLETAHAVFAKLIRFISKG
HNKGHQATWISFGYNHLKLILSWKWIKPRTQHDLEDEDQGEGKASETQNI
LERLVEPVLLNLSEAHRNVQKGFVDAIQLLSKFAGLALLTPFRDSNKQVI
DRLRMFCVFATRELFQISSLLKKDDMGVASNRGVENGETERQPDAIERLT
KLLCEICKRSGAIPHHMTLTVIAEMGSSLDDRVVAVLFDAMEEVLQTDRN
QADAQEHDDSDESEEEGEDPTTFEENDSDEFNSDMQVDEGGREGTQRDVP
FLDQNQESADDNLVEAASGEEGSSDSDIDMDVDDEDPAVLEELDKRLVTH
MKLVLQEKNASIRGKREPEAKFQITRRILNVIEEVAKNLRLRLSTNKDDG
RTGIVFLDLQCRLYEFAMSETRPEGQFLKNVCGIISKHMLLPLSLLQEKV
ADKETACHIADRFLSSLSTCDILKPLSDLEIQTISKSAACIVGVAALSSD
NDYEQFMARYQNLMKVMLTTNSIMKPKMFSSFLNKAPSLSLSLFPTVCES
LETAQRTRNQIGMASIIILQLAELTEEQNSIPIGKRKAFWVSFSQFLQRE
CEAEFKGWALGGIENIIRVVHFGCTRHFMVVSDSHKETLLAVVKAKVPQK
RQHRFRKLLDSASTKVKLIEVTEKDSLCNDDEDQAKKVVSKKRKLK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007015DNA_pol_V/MYBBP1A